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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(1)
<---------
YAB1
----------->
RAV1(2)
<---------
ARR11(3)
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
YAB1
===================
HOX2a_HOX2a
------>
ZmHOX2a(1)
--------->
ARR11(3)
--------->
ANAC58
<---------
YAB1
------
<---------
ARR11(3)
--------->
ANAC46
--------->
YAB1
<---------
WOX13(1)
<
<-----------
ARR10
------>
ZmHOX2a(2)
----------->
RAV1(2)
<---------
AHL20(2)
<------
------
At4g35610
==================================
HOX2a_HOX2a
---------->
DOF2
--------->
At4g35610
----->
At4g35610
<---------
GLK1(1)
<---------
ICU4
--------->
ICU4
---------->
DOF2
<---------
At4g35610
gcagaactaagcacaagatcatcgatctcctgtggtaacgagccatcat
ctc
ctgtttcatgatcatatataaaaggaaagagattgattcagctaatca
24853500
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
------>
MYB46(1)
--------->
YAB1
--------->
GLK1(1)
--------->
TOE2(3)
--->
YAB1
<---------
GLK1(1)
<---------
MYB59
--------
-------
TEIL
<---------
ARR11(3)
------>
MYB46(1)
--------->
MYB46(3)
--------->
YAB1
---
ATHB12
--------->
ARR11(3)
------>
MYB83
<------
ZmHOX2a(1)
------>
MYB83
<-------
aattcataaacatggataagatatcacaaactctaaacctagctcaaactatgaacaatagaggataaccacttgaaacctaattttaatcagaagattt
24853600
-------
<------
<---------
At4g35610
--------->
GLK1(2)
<---------
At4g35610
<-----------------
AGL1
<-----------
RAV1(1)
<---------
DAG2
------->
TEIL
--------->
KAN4(1)
<---------
ANAC58
-------->
P
--------->
ARR14(2)
<------
<---------
ANAC58
<-----------
GT1
------->
TEIL
<---------
KAN4(1)
->
ARR11(3)
<----------
DOF2
--------->
DAG2
---------->
DOF2
<---------
KAN4(2)
--
ARR11(3)
--------->
YAB1
---------->
DOF2
<----------
DOF2
<---------
ARR14(2)
-------
tagtacttgtgctgcttattcaaaattcctttgcccaaaaaaaaaaagtttgacttaccttttgaaagacgaacgtatccactatggaacaatctttcgt
24853700
--------->
AHL20(2)
<------
MYB46(1)
<---------
AHL20(2)
--------->
GLK1(1)
<----------
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
--------->
LBD16
-->
ANAC55(2)
----------->
GT1
<---------
WOX13(1)
------>
ZmHOX2a(1)
---
ANAC58
<------
MYB83
>>>>>>>>>
ARR2
--------->
TOE2(3)
---
ANAC58
--------->
MYB59
<---------
YAB1
--------->
GLK1(2)
-->
YAB1
--------->
MYB46(2)
<---------
AHL20(2)
<---------
GLK1(2)
aatctcactttctagtttggtatttaaaaaacccaaaatttgattgtcaaattaaatacaataagagattcctaaacccagaattcaattgcgaaatcaa
24853800
--------->
GLK1(2)
<---------
HSFB2a(2)
<---------
ARR14(2)
<---------
HSFC1(1)
<---------
ANAC46
<---------
HSFC1(2)
--------->
ANAC55(2)
--------->
HSFB2a(1)
<---------
ANAC58
<---------
HSFB2a(1)
<---------
ANAC55(1)
----------->
GT1
<---------
ANAC55(2)
--------->
ANAC46
--------->
LBD16
<---------
ANAC58
--------->
MYB52(1)
<---------
LBD16
--
<-----------
GT1
----------->
GT1
--------->
HSFC1(1)
---
<----------
DOF2
------->
TEIL
--------->
HSFC1(2)
---
<---------
ARR14(2)
----------->
GT1
--------->
ARR14(2)
--------->
HSFB2a(2)
<---
acagagacgatacagagagagcgagagagcgagagagagagagtgatttac
gtgagaacgaatcggataaacggaaatttccagaagccggatgagtttc
24853900
----------->
GT1
<---------
YAB1
<-
--------->
ICU4
<---------
GLK1(2)
<---------
YAB1
------------>
CBF
--------->
ANAC58
<-
--------->
YAB1
--------->
AHL20(2)
<---------
SPL7
--------->
GLK1(2)
<----------
DOF2
<-------
GAMYB
<---------
YAB1
<---------
ANAC46
---------
------->
LBD16
--------->
LBD16
<---------
ANAC55(2)
<---------
ANAC55(2)
--
------>
ANAC46
<---------
LBD16
--------->
ANAC55(2)
--------->
ANAC55(2)
<-------
------>
LBD16
--------->
ARR14(2)
<---------
ICU4
<-----------------------
TaNAC69(2)
------
LBD16
*
TSS
<---------
ARR14(2)
<---------
AHL20(2)
------->
TEIL
--------->
ANAC58
<-
ccgctattgtgatgagtaac
aaaacaaattcgggagttgtctatttaatacttatcaatagcccatgaacgcagagacgtatggacgcgagaatcgttag
24854000
<-----------
TGA1
<---------
TGA1a
--------->
TGA1a
--------->
ANAC46
----------->
HVH21
--------->
TGA2(2)
<-----------
TGA1
--------->
ANAC58
--------->
ANAC58
--------->
bZIP60(2)
------->
MYC2
<---------
bZIP60(2)
------->
MYC4
<---------
ANAC58
<-------
MYC2
<---------
TGA1a
------->
MYC3
--------->
bZIP60(1)
<-------
MYC3
<---------
ANAC58
<-------
MYC4
<---------
bZIP60(1)
<---------
TGA1a
--------->
O2
--------->
bZIP60(1)
<--------
ABF1
<---------
O2
<---------
O2
<---------
ANAC55(2)
--------->
O2
--------->
ANAC55(2)
--------->
ZAT14
--------->
O2
--------->
ANAC55(2)
<---------
O2
--------->
TGA1a
<---------
ANAC46
<-----------
HVH21
--------->
TGA1a
======================
bZIP_bZIP
<------
MYB83
=========================
bZIP_bZIP
<------
MYB46(1)
<-----------
HVH21
<---------
TGA2(1)
<---------
ICU4
----------->
HVH21
--------->
TGA2(1)
--------->
YAB1
--------
ANAC58
<---------
ANAC55(2)
------>
ZmHOX2a(1)
<---------
ATHB12
--------
ANAC58
----------->
STF1
--------->
ANAC58
--------->
ANAC46
-----
>
TOE2(3)
--------->
REM1(2)
--------->
DEAR3(1)
<---------
MYB52(1)
--------->
ANAC58
-------
------->
ANAC55(2)
<-----------
STF1
--------->
ANAC58
<-----------
GT1
<---------
YAB1
--
MYB52(1)
----------->
TGA1
<-----------
HVH21
---------->
ID1
--------->
ANAC58
<-------
--------
ANAC55(2)
----------->
HVH21
--------->
ANAC46
<---------
AHL20(2)
--------->
MYB59
tacgtgacacgtgtaaaccagtgacgtcaccgctctcgtcacaaacccgctagtattgtcctcttctattttatctcacacaatcatgttaggttatcat
24854100
--------->
AHL20(2)
------>
NtERF2
------->
GAMYB
--------->
DEAR3(1)
--------->
TOE2(2)
--------->
DEAR3(2)
--------->
ZAT6
--------->
MYB46(3)
--------->
AHL20(2)
---------->
AtSPL8
<---------
MYB55(2)
<---------
AHL20(2)
-->
YAB1
--------->
MYB52(1)
--------->
CCA1(2)
--
YAB1
----------->
GT1
<---------
ETT(2)
---------->
DOF2
--------->
AHL20(2)
agtaccactaaacatttatgtgagaatggatggatattagacaaccgacgacaaataaaacaaacaaaagtagatagacgaccataaattaaactataaa
24854200
<---------
GLK1(2)
--------->
ARR11(3)
<---------
ARR11(3)
<-----------
GT1
-------->
ATHB1
<---------
ANAC58
<----
--------->
ATHB12
----------->
GT1
<---------
ANAC46
<
<---------
ICU4
<---------
ANAC58
<---------
AHL20(2)
-----
<---------
YAB1
--------->
ARR11(3)
<---------
YAB1
-----
----------->
GT1
----------->
ARR10
<---------
ANAC46
--------->
ICU4
<-----
cgaagattgagggaaaaaatcattggtttagattttcgaacaaatatcgtgaaaagtttttcatcttgtagtttttgtaattaatggtgtatgaaaaatc
24854300
--------->
MYB52(1)
--------->
ARR11(1)
<---------
DOF5.7(2)
--------->
YAB1
<---------
ZAT14
---------->
DOF2
>>>>>>>
--------->
ZAT14
<---------
ATHB12
>>>>>>>
<---------
WRKY12
<---------
ATHB12
>>>>>>>
--------->
AHL20(1)
--------->
ANAC46
>>>>>>>
-----
ICU4
<---------
AHL20(2)
--------->
ANAC58
<---------
ANAC46
---------
MYB46(3)
--------->
AHL20(2)
--------->
ANAC58
<-----------
RAV1(1)
--->
ATHB1
<---------
AHL20(1)
------>
MYB46(1)
<---------
MYB46(3)
---->
ATHB12
<---------
AHL20(2)
------>
MYB83
--------->
CCA1(2)
<---------
ANAC46
----
YAB1
--------->
AHL20(2)
------->
TEIL
<---------
ARR11(3)
<---------
ANAC46
attggtttgtttagttgaattaaatttcagtaaacggtttagagtatgaacccactcaataaagatttgactgccaagcgttactggtgtctggtggatt
24854400
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AGI:
At5g61820.1
Description:
similar to MtN19-like protein [Pisum sativum] (GB:AAU14999.2); contains InterPro domain Stress up-regulated Nod 19 (InterPro:IPR011692)
Range:
from: 24851543
to: 24853920
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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