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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                          ------>ZmHOX2a(1)                <---------YAB1
                        ----------->RAV1(2)               <---------ARR11(3)
              <------ZmHOX2a(2)     --------->ANAC58     --------->YAB1
              ===================HOX2a_HOX2a     ------>ZmHOX2a(1)
             --------->ARR11(3)     --------->ANAC58    <---------YAB1                        ------
             <---------ARR11(3)     --------->ANAC46  --------->YAB1            <---------WOX13(1) <
<-----------ARR10     ------>ZmHOX2a(2)        ----------->RAV1(2)<---------AHL20(2)         <------
------At4g35610       ==================================HOX2a_HOX2a ---------->DOF2     --------->At4g35610
----->At4g35610      <---------GLK1(1)    <---------ICU4--------->ICU4   ---------->DOF2<---------At4g35610
 
gcagaactaagcacaagatcatcgatctcctgtggtaacgagccatcatctcctgtttcatgatcatatataaaaggaaagagattgattcagctaatca  24853500
                                                                                 --------->AHL20(2)
                                                                                 <---------AHL20(2)
                                                                                --------->YAB1
                                                                             ------>MYB46(1)
--------->YAB1   --------->GLK1(1)                                         --------->TOE2(3)
--->YAB1         <---------GLK1(1)                                         <---------MYB59  --------
-------TEIL     <---------ARR11(3)  ------>MYB46(1)             --------->MYB46(3)    --------->YAB1
---ATHB12       --------->ARR11(3)  ------>MYB83           <------ZmHOX2a(1) ------>MYB83   <-------
 
aattcataaacatggataagatatcacaaactctaaacctagctcaaactatgaacaatagaggataaccacttgaaacctaattttaatcagaagattt  24853600
                                                                                             -------
                                                                                             <------
         <---------At4g35610                                                           --------->GLK1(2)
      <---------At4g35610                                                <-----------------AGL1
     <-----------RAV1(1)                              <---------DAG2    ------->TEIL --------->KAN4(1)
 <---------ANAC58                                   -------->P          --------->ARR14(2)   <------
 <---------ANAC58                                  <-----------GT1  ------->TEIL     <---------KAN4(1)
->ARR11(3)               <----------DOF2 --------->DAG2     ---------->DOF2         <---------KAN4(2)
--ARR11(3)      --------->YAB1          ---------->DOF2<----------DOF2  <---------ARR14(2)   -------
 
tagtacttgtgctgcttattcaaaattcctttgcccaaaaaaaaaaagtttgacttaccttttgaaagacgaacgtatccactatggaacaatctttcgt  24853700
                    --------->AHL20(2)
              <------MYB46(1)                   <---------AHL20(2)            --------->GLK1(1)
    <----------DOF2 <---------AHL20(2)          --------->AHL20(2)         --------->LBD16
-->ANAC55(2)  ----------->GT1          <---------WOX13(1)           ------>ZmHOX2a(1)
---ANAC58     <------MYB83            >>>>>>>>>ARR2                --------->TOE2(3)
---ANAC58    --------->MYB59        <---------YAB1              --------->GLK1(2)
-->YAB1      --------->MYB46(2)     <---------AHL20(2)         <---------GLK1(2)
 
aatctcactttctagtttggtatttaaaaaacccaaaatttgattgtcaaattaaatacaataagagattcctaaacccagaattcaattgcgaaatcaa  24853800
                                                         --------->GLK1(2)   <---------HSFB2a(2)
                                                         <---------ARR14(2)  <---------HSFC1(1)
                                              <---------ANAC46          <---------HSFC1(2)
                                              --------->ANAC55(2)       --------->HSFB2a(1)
                                              <---------ANAC58          <---------HSFB2a(1)
                                              <---------ANAC55(1)   ----------->GT1
                                              <---------ANAC55(2)  --------->ANAC46  --------->LBD16
                                              <---------ANAC58   --------->MYB52(1)<---------LBD16--
                                            <-----------GT1 ----------->GT1  --------->HSFC1(1)  ---
                                          <----------DOF2------->TEIL   --------->HSFC1(2)       ---
     <---------ARR14(2)              ----------->GT1     --------->ARR14(2)  --------->HSFB2a(2)<---
 
acagagacgatacagagagagcgagagagcgagagagagagagtgatttacgtgagaacgaatcggataaacggaaatttccagaagccggatgagtttc  24853900
          ----------->GT1
        <---------YAB1                                                                            <-
        --------->ICU4                                                                 <---------GLK1(2)
     <---------YAB1                               ------------>CBF               --------->ANAC58 <-
   --------->YAB1                       --------->AHL20(2)                <---------SPL7--------->GLK1(2)
<----------DOF2                <-------GAMYB      <---------YAB1         <---------ANAC46  ---------
------->LBD16               --------->LBD16   <---------ANAC55(2)        <---------ANAC55(2)      --
------>ANAC46             <---------LBD16     --------->ANAC55(2)        --------->ANAC55(2)<-------
------>LBD16           --------->ARR14(2)    <---------ICU4             <-----------------------TaNAC69(2)
------LBD16        *TSS<---------ARR14(2)<---------AHL20(2)     ------->TEIL     --------->ANAC58 <-
 
ccgctattgtgatgagtaacaaaacaaattcgggagttgtctatttaatacttatcaatagcccatgaacgcagagacgtatggacgcgagaatcgttag  24854000
                                 <-----------TGA1
                                <---------TGA1a
                                --------->TGA1a
                                --------->ANAC46
                      ----------->HVH21
                      --------->TGA2(2)
                     <-----------TGA1
                    --------->ANAC58
                    --------->ANAC58
                    --------->bZIP60(2)
      ------->MYC2  <---------bZIP60(2)
      ------->MYC4  <---------ANAC58
      <-------MYC2  <---------TGA1a
      ------->MYC3  --------->bZIP60(1)
      <-------MYC3  <---------ANAC58
      <-------MYC4  <---------bZIP60(1)
     <---------TGA1a--------->O2--------->bZIP60(1)
     <--------ABF1  <---------O2<---------O2
     <---------ANAC55(2)        --------->O2
     --------->ANAC55(2)   --------->ZAT14
     --------->O2   --------->ANAC55(2)
     <---------O2   --------->TGA1a
     <---------ANAC46<-----------HVH21
     --------->TGA1a======================bZIP_bZIP                                    <------MYB83
     =========================bZIP_bZIP                                                <------MYB46(1)
 <-----------HVH21  <---------TGA2(1)                                           <---------ICU4
----------->HVH21   --------->TGA2(1)                                           --------->YAB1
--------ANAC58      <---------ANAC55(2)                  ------>ZmHOX2a(1)     <---------ATHB12
--------ANAC58     ----------->STF1        --------->ANAC58               --------->ANAC46     -----
>TOE2(3)--------->REM1(2) --------->DEAR3(1) <---------MYB52(1)           --------->ANAC58   -------
------->ANAC55(2)  <-----------STF1        --------->ANAC58        <-----------GT1<---------YAB1
--MYB52(1)       ----------->TGA1<-----------HVH21    ---------->ID1      --------->ANAC58  <-------
--------ANAC55(2)----------->HVH21         --------->ANAC46       <---------AHL20(2)  --------->MYB59
 
tacgtgacacgtgtaaaccagtgacgtcaccgctctcgtcacaaacccgctagtattgtcctcttctattttatctcacacaatcatgttaggttatcat  24854100
                                                    --------->AHL20(2)
                                             ------>NtERF2
                                         ------->GAMYB
                                         --------->DEAR3(1)
                                         --------->TOE2(2)
                                        --------->DEAR3(2)
 --------->ZAT6                         --------->MYB46(3)                           --------->AHL20(2)
---------->AtSPL8                       <---------MYB55(2)                           <---------AHL20(2)
-->YAB1                               --------->MYB52(1)              --------->CCA1(2)
--YAB1                     ----------->GT1  <---------ETT(2)  ---------->DOF2    --------->AHL20(2)
 
agtaccactaaacatttatgtgagaatggatggatattagacaaccgacgacaaataaaacaaacaaaagtagatagacgaccataaattaaactataaa  24854200
                           <---------GLK1(2)
                           --------->ARR11(3)
                           <---------ARR11(3)          <-----------GT1
                -------->ATHB1             <---------ANAC58                                    <----
                --------->ATHB12           ----------->GT1                         <---------ANAC46<
                <---------ICU4             <---------ANAC58                  <---------AHL20(2)-----
               <---------YAB1            --------->ARR11(3)                 <---------YAB1     -----
       ----------->GT1   ----------->ARR10 <---------ANAC46                 --------->ICU4    <-----
 
cgaagattgagggaaaaaatcattggtttagattttcgaacaaatatcgtgaaaagtttttcatcttgtagtttttgtaattaatggtgtatgaaaaatc  24854300
                            --------->MYB52(1)              --------->ARR11(1)
                            <---------DOF5.7(2)         --------->YAB1
                           <---------ZAT14              ---------->DOF2                      >>>>>>>
                           --------->ZAT14             <---------ATHB12                      >>>>>>>
                           <---------WRKY12        <---------ATHB12                          >>>>>>>
                 --------->AHL20(1)               --------->ANAC46                           >>>>>>>
-----ICU4        <---------AHL20(2)               --------->ANAC58                      <---------ANAC46
---------MYB46(3)--------->AHL20(2)               --------->ANAC58                     <-----------RAV1(1)
--->ATHB1        <---------AHL20(1)              ------>MYB46(1)                       <---------MYB46(3)
---->ATHB12     <---------AHL20(2)               ------>MYB83--------->CCA1(2)        <---------ANAC46
----YAB1        --------->AHL20(2)           ------->TEIL   <---------ARR11(3) <---------ANAC46
 
attggtttgtttagttgaattaaatttcagtaaacggtttagagtatgaacccactcaataaagatttgactgccaagcgttactggtgtctggtggatt  24854400
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AGI:  At5g61820.1   
Description:  similar to MtN19-like protein [Pisum sativum] (GB:AAU14999.2); contains InterPro domain Stress up-regulated Nod 19 (InterPro:IPR011692)
Range:  from: 24851543    to: 24853920    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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