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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                     <---------------AGL15
                                     --------->HSFB2a(2)
                                     --------------->AGL15
                                <---------HSFB2a(1)
                                <---------HSFC1(2)
                                --------->HSFB2a(1)
                                --------->HSFC1(2) --------->DAG2            <------MYB46(1)
                          ---------->DOF2        ---------->DOF2            --------->MYB46(2)
                 <---------------AGL15      ----------->GT1                 --------->MYB111(1)
                 =====================================MADS_MADS             --------->MYB111(2)
                 --------------->AGL15     --------->DAG2                   --------->MYB59
                 ------>ZmHOX2a(1)   <---------HSFB2a(2)                  <---------MYB52(1)      <-
                --------->TOE2(3)   ----------------->AGL3              --------->MYB111(1)  >>>>>>>
---------ZAT6   --------->TOE1(3)   ----------------->AGL2       ---------->DOF2          --------->ANAC58
---------->GT1  ----------------->AGL2    ---------->DOF2     ----------->GT1<------MYB83 --------->ANAC58
 
aagtgttaatttctcatttccttaaactagaaagaaggttccataaaaagttaaaaggcaatgtctagtaaagagtagttaggtagttttcacaagaaaa  24775200
                                                          --------------->AGL15
                                                          <---------------AGL15
                                                         ----------------->AGL1
                                                         <-----------------AGL3
                                                         ----------------->AGL2
                                                         ----------------->AG
                                                        --------->SPL7
                                                      <---------SPL7
                                                     <---------ANAC58
                                                     <---------ANAC58
                                                    --------------->AtSPL3
                                                    <---------------AtSPL8                 ---------
               --------->ATHB12              <------MYB46(1)                             <----------
    <----------DOF2                          ----------->GT1                       --------->ANAC55(2)
    ------>ZmHOX2a(1)                        <------MYB83----------------->AGL3    <---------ANAC55(2)
   --------->TOE2(3)      <---------MYB59    <---------At4g35610                 <-----------GT1
------TEIL   <---------WOX13(1)   <---------AHL20(2)--------------->AtSPL8   --------->AHL20(2)-----
>>>GT-3b  <---------TOE2(3)------>ZmHOX2a(1)<---------DEAR3(1)               <---------AHL20(2)<----
 
atacatcctttataagattgattagcattcctaacatttttttttgggaggtgatttcgtaccaaaaacagaaacaaaattttaatacgttttcacagta  24775300
                                               <---------AHL20(2)
                                               <---------AHL20(1)               <------MYB46(1)
                                               --------->AHL20(2)               <------MYB83
                                               --------->AHL20(1)              --------->MYB59
                               <---------YAB1 --------->AHL20(2)             <---------MYB52(1)
>ZAT6 <---------ARR11(3)      --------->AHL20(2)                  ----------->GT1
-GT1  --------->GLK1(2)   ----------->GT1     <---------ATHB12    <------MYB46(1)
---->ZAT14              ---------->DOF2      XXXXXXXXXXXXXXXXXXXX>MIR860<-----------GT1
-----ZAT14          <----------ID1    <---------MYB46(3)          <------MYB83<--------P
 
caatgccaaaatctaattctaatatgacaaagttaaaatagtcgttccaataaattgacctatacaatttggtttataccagtaggtcataaacttatac  24775400
                                            <--------ATHB1
                <------NtERF2               <---------ICU4
                --------->At4g35610         --------->YAB1
              <-----------RAV1(2)          <---------ATHB12                <------------CBF
       --------->ARR11(3)     --------->ANAC46                         --------->ZAT18    --------->YAB1
 <---------ANAC58             --------->ANAC58    <---------ZAT18      <---------ZAT18    --------->AHL20(2)
 <---------ANAC58             --------->ANAC58    --------->ZAT18  <---------ICU4         <---------AHL20(2)
<---------MYB46(3)     --------->YAB1      <---------ATHB51     --------->YAB1        --------->AHL20(2)
 
aattggttgagaacttggcaggggaataaaaacacacaagttttcaataatagcgaacaaaaacaactcataagtccacattgatacaactaattaaaac  24775500
               <<<<<<<<<<GT-1
               <---------ARR11(3)
       ------>ZmHOX2a(2)
      <---------GLK1(1)
      --------->GLK1(1)
      <------ZmHOX2a(2)
     --------->AGP1
     <---------ARR14(2)                                                                    ---------
     <---------ARR11(3)                                                                    ---------
     --------->ARR11(3)                                        --------->ZAT6              -------->ATHB1
     <---------AGP1                                          ------->TEIL                 --------->ICU4
     --------->ARR14(2)          <-----------HVH21          <---------CCA1(2)             <---------ATHB51
    <---------CCA1(2)       <---------At4g35610   --------->ANAC46      *TSS    ---------->DOF2
    <---------At4g35610     --------->At4g35610 <---------ALFIN1     <---------ZAT6       <---------ATHB12
 
atgtttcagatctctctatatcatttacttcatctccatcacataccatctacacatctctctgtatctctactgtaaacaaataaagtttcaattattc  24775600
                                                --------->AHL20(2)                          --------
                                              --------->TOE1(3)                        <---------ETT(2)
  <----------DOF2                             --------->TOE2(3)                        --------->ETT(2)
  <---------DAG2                       --------->GLK1(2)   <---------ANAC58           ---------->ARF1
>AHL20(2)                         ---------->DOF2          <---------ANAC58       <---------ANAC58
>ATHB51 <---------YAB1       <---------ALFIN1 <----------DOF2                     <---------ANAC58
 
atacactttttcttattccattttgtattctcacacctaaagattccaactttaaatctcttgcttaatactcaaaatccaatttccttgtctacaaaag  24775700
                                                                             --------->MYB46(3)
                                                                            ------>MYB46(1)     ----
                                             <------MYB83                --------->MYB46(3)  <------
                                             ----------->GT1        --------->ZAT6          --------
                           --------->At4g35610            <---------ANAC58  ------>MYB83  <---------ICU4
              --------->ZAT6                 <------MYB46(1)      <---------ARR11(3)      --------->YAB1
-->DOF2     ----------->RAV1(1)      <-----------------AG <---------ANAC58 --------->ANAC46 <-------
 
aaaaaccaaaaaatccaacactattccatgagatgagaaaatcccatttggtaaaactgatacttgcagtatctctaccaacaacattcttgatcatgat  24775800
                                                                     --------->GLK1(1)
     <---------ICU4                                                  --------->HSFB2a(1)
     --------->YAB1                                                 <---------ARR11(1)
    <---------YAB1                                                  ------->TEIL                   <
  <---------ICU4                                                    --------->ARR14(2)             -
  --------->YAB1                                                    <---------ARR14(2)           ---
 --------->ICU4                                                     <-----------ARR10     --------->HSFC1(2)
-->ZmHOX2a(2)                                  <---------ATHB12    <---------CCA1(2)      <---------HSFB2a(1)
---ICU4                               ------->GAMYB           --------->O2                <---------HSFC1(2)
->ICU4     --------->YAB1          ----------->RAV1(1)        <---------O2------>ZmHOX2a(1)   <-----
--YAB1   <---------ARR11(3)       --------->MYB46(3)       --------->ANAC46               --------->HSFB2a(1)
 
cgccatcatcataatcttcatcttctgtagaagaacaacaacagagaccaatgaagttcaatacgacgtcgaatctccttacgagaaacaagaattttcc  24775900
                                                            <---------------------WRI1
                                                          ------>ZmHOX2a(2)
                                                          ==============================HOX2a_HOX2a
                                                         <------ZmHOX2a(2)
                                                         ===============================HOX2a_HOX2a
                                                        --------->ARR11(3)
                                                        <---------ARR11(3)
                                                        --------->ARR14(2)
                     <-----------ARR10                 ------->GAMYB
                    =====================================HOX2a_HOX2a
        --------->LBD16                              <---------TOE2(3)
       --------->ANAC46                           ------>ZmHOX2a(2)
      ==================HOX2a_HOX2a              <------ZmHOX2a(2)
      =====================HOX2a_HOX2a           --------->CCA1(2)
      ------>ZmHOX2a(2)                         <---------ARR11(3)
     <------ZmHOX2a(2)                          --------->ARR11(3)
     ======================HOX2a_HOX2a          <---------ARR14(2)                        --------->At4g35610
     ===================HOX2a_HOX2a             <-----------ARR10                <------ZmHOX2a(1)
    <---------ARR14(2)                          <---------AGP1                  --------->LBD16
    --------->ARR14(2)      --------->YAB1      --------->ARR14(2)             --------->LBD16
---------DOF5.7(2)  <------ZmHOX2a(1)           --------->AGP1   --------->ARR14(2)       <---------At4g35610
-------->MYB52(1)   ====================================HOX2a_HOX2a           <---------HSFB2a(2)
------>DOF5.7(2)  --------->ALFIN1      --------->ALFIN1<---------ARR14(2)    <-----------RAV1(2)
------------AGL1 <------ZmHOX2a(1)    ------->GAMYB --------->MYB52(1)        --------->HSFB2a(2)
 
gataacggatccgaaacagaggaggagcttatcatcttcaacggtggagaagatctaacgatctgcgatatactcgatgctccaggagaagtcatcggaa  24776000
                          <---------O2
                          --------->bZIP60(1)
                          --------->TGA1a
                          ----------->GT1
                          --------->O2     ---------->DOF2      --------->TOE1(2)            -------
                          --------->bZIP60(2)             <---------TOE2(2)                 <-------
          <-------TEIL    <---------bZIP60(1)             <---------TOE2(3)      <---------ANAC46
        --------->At5g28300            --------->ALFIN1   <---------TOE1(2)      ----------->GT1
      --------------->AtSPL3    ---------->DOF2         --------------------->WRI1--------->At5g28300
 --------->ANAC46         =================bZIP_DOF  <---------ARR11(3)        --------->At4g35610
 --------->ANAC58  ---------->DOF2  <-----------------------TaNAC69(2)  <---------DAG2      <-------
 --------->ANAC58  =================bZIP_DOF         --------->ARR11(3) <----------DOF2     --------
 
aatcaagctacggtacattatacaaagcgacgttacaaagaagtgggaaagttagagttcttaggttccttcgacctttatgtgctgtgaattcagattc  24776100
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AGI:  At5g61570.1   
Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07620.1); similar to protein kinase [Arabidopsis arenosa] (GB:AAR15452.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)
Range:  from: 24775573    to: 24777878    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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