Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ARR14(2)                         --------->ANAC58     <---------ARR11(3)                         --------->ANAC55(2)     <---------ARR14(2)           <---------AHL20(2) ------->ANAC58         <---------GLK1(2)<---------YAB1                                     <-------- ------->ANAC58         <---------ARR11(3)      --------->ANAC46                 <---------TOE1(3) ------->ANAC46         --------->ARR11(3)      --------->ANAC58     <---------ICU4<------ZmHOX2a(1) --->YAB1           ---------->DOF2    <-----------GT1          ------->GAMYB    <---------TOE2(3) -- -->ZAT6   ---------->DOF2        --------->AHL20(2)         --------->YAB1<---------------AGL15   --   taagcaatatccacaaagacatgaaagatacttcatttatataacgattcaagtaatcttcaataaccacataatttcaatttaaggatgccaaacaaac  24702900                                                                          <------MYB46(1)                                                                          ----------->GT1                                                                          <------MYB83                                                                         <---------MYB46(3)                                                                         --------->MYB46(2)                                                                         --------->MYB111(1)                                                                         --------->MYB59                                                                         --------->MYB111(2)                                                                         <---------AtMYB61                                                                        <--------P                                                                        <---------MYB55(1)                                                                       <---------ANAC58                                                                       <-------GAMYB                                                                       <---------ANAC58                                                                       <---------ANAC46                                                            ---------->DOF2  ---------->DOF2    --------->LBD16               <---------YAB1 <---------LBD16      <------MYB46(1)     <---------- -MYB52(2)  --------->YAB1      --------->YAB1  <---------ANAC46    --------->ALFIN1     <----------DOF2 ---->MYB46(1)          <<<<<<<ZML2  <---------YAB1    ---------->DOF2<------MYB83  ----------->HVH21 ---->MYB83<---------ATHB12     <---------ICU4  ----------->RAV1(2) <XXXXXXXXXXXXXXXXXXXXMIR3440B-5P   ctatccctgagcaatcgtagcaactagaacaaaatcatggttattgagttacctggagaaagaaaaggaagtgggttggtaaagaagcgacctttcaggc  24703000                                                 <---------AtMYB61                                                <------NtERF2                                              <---------DEAR3(1)                                              --------->ALFIN1                                             --------->ATERF1(1)                                             <---------LBD16                                             <------NtERF2                                            <---------RAP2.3(1)                                           <---------RAP2.3(2)                ===========================RAV<---------ANAC46                ----------->RAV1(2)        <---------DEAR3(1)              <---------WRKY18(1)         --------->ATERF1(1)             --------->WRKY38(1)          <---------At4g35610             --------->WRKY12        --------->ANAC46      ------>MYB46(1)    <---------------------WRI1<-------GAMYB                <---------GLK1(2)   -      ------>MYB83     <---------MYB46(3) --------->At4g35610                 --------->ANAC58    ---    --------->AtMYB61 <--------P     --------->ANAC58                         --------->ANAC58-------    <---------MYB59  <-------GAMYB   --------->ANAC58              <---------ATHB12         --------- -HVH21      ----------->HVH21 ----------->RAV1(1)<---------MYB46(3) ---------->DOF2      <xxxxxxxxxx   ctaagaccaaacccattgacctgggttgatgaacaacacaaggaagcggcggaggttgacatgtccctaatcaaagactcaagcttctctggctaaaatc  24703100            <------MYB83           <---------MYB46(3) --------->DOF2 --->ZmHOX2a(1) -->ARR11(3)<------MYB46(1)            <---------ATHB12                       ---------->DOF2 -->ARR10 <---------ANAC46        --------->TOE1(3)                      ----------->GT1      <------ xxxxxxxxxxxxxxxxsmallRNA(le3)    --------->TOE2(3)--------->REM1(1)--------->LBD16       <---------GLK1(2)   ctgaaagacttggtgggtttagataataagagaaaacctcaatcgtttctcttacaccaattctcaaacccagagaagaaaaaagaagaacagaaacttt  24703200                                              ------->MYC4                                              ------->MYC2                                              ------->PIF5                                              <-------MYC2                                              <-------PIF5                                              ------->MYC3                                              <-------MYC3                                             <---------O2                                             --------->TGA1a                                             <--------ABF1                                             <---------TGA1a                                             <---------ANAC55(2)                                            ------>NtERF2                                           <------------OsbHLH66                                           <---------ALFIN1                                         <-----------HVH21                                         ------>NtERF2                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46                                     --------->ARR14(2)                                     <---------ARR14(2)                             --------->GLK1(2)<-------MYC4                             --------->ARR14(2)              <---------ANAC46                             <---------ARR11(3)              <---------ANAC58         ==============================================bZIP_DOF     <---------DOF5.7(2)     --------->LBD16         --------->ARR11(3)              <---------TGA1a    <---------ANAC46         <---------ARR14(2)              --------->TGA1a               ------>ZmHOX2a(2)    <---------LBD16         --------->RVE1(1)--------->O2    <---------ANAC58<---------ANAC58   <---------LBD16=====================================bZIP_DOF <---------TOE1(2) <------------------ <-----------GT1  ---------->DOF2    --------->GLK1(2)       --------->O2    <---------ANAC46      <- ----DOF2---------->DOF2    <---------GLK1(1)<---------ANAC46<---------O2    <---------ANAC58      --   atttttccgggtaaagaagaaaaagagagaatatctgagaatccgccacgtgtgattacggtctcgtgggtaacgtcttccttgttcggatgatccaatg  24703300                                <----------DOF2                         <------MYB46(1) <---------ANAC46                         <------MYB83    <---------ANAC58       <---------KAN4(1)                        <---------DEAR3(1)    <---------ANAC46  --------->KAN4(1)                       <--------P        <---------ANAC58      <---------KAN4(2) ---WRI1      --------->TOE2(3)*TSS   ----------->TGA1         --------->ARR14(2)     <---------AHL20(2) --------At4g35610     <---------MYB52(1)<---------bZIP60(2)   <---------ARR14(2)  --------->YAB1<--- ------->At4g35610--------->MYB52(1)  ----------->HVH21        ---------->TaMYB80--------->AHL20(2)   cagcggcttatcgctatctcaaacggttggctctcttttgatgacgggtcttgtacatttgtgggaatatgctaattttgcaaaataataaatctatttt  24703400                                            --------->AHL20(2)                                        --------->AHL20(2)                               <------------CBF                             <---------AHL20(2)             --------->AHL20(2)                    <--                             --------->AHL20(1)             --------->YAB1                        <--                             <---------AHL20(1)         --------->AHL20(2)           <---------AHL20(2)                             --------->AHL20(2)         <---------AHL20(2)         --------->YAB1 ---                            --------->AHL20(2)  --------->DAG2      --------->AHL20(2)   <---------ICU4                            <---------AHL20(2) ---------->DOF2      <---------AHL20(2)  --------->ICU4   <---------ZAT6<---------AHL20(2) <---------ANAC46<---------AHL20(2)     --------->MYB59  <-------- --------GT1     --------->AHL20(2)---------->ID1----------->GT1   --------->AHL20(2)<---------YAB1   tactagtgatacaaaacatataatttctaaataaattgtcgtttaaataaaaagttaattaataaaaaaaaaaattttaggtcatttataatttttacaa  24703500                          ----------->GT1                       <------ZmHOX2a(1)               --------->YAB1           --------->AHL20(2)                                                           <---------AHL20(2) -------AHL20(1)  --------->YAB1                                                        --------->AHL20(2) -------ARR11(3)--------->AHL20(1)                                                      <---------YAB1 ------>AHL20(1)--------->AHL20(2)             <-------TEIL                            --------->AHL20(2) ---GT1   --------->AHL20(2) ------->TEIL  <---------YAB1                              <---------AHL20(2)   aatatttgataaataaaaaataataggaatgtatatactaaaatcaagattcaatttgagatgtatgactaaaacaattgatagaaaattttaattaaca  24703600                                        <---------AHL20(2)                                <---------MYB59                                        --------->AHL20(2)                                -----------                                   --------->MYB46(3)                                     <----------                                  --------->ANAC58                                       ============                                  --------->ANAC58                                       ------------                       <---------AHL20(2)                               --------->HSFB2a(2) ------>MYB46(1)                       <---------YAB1   --------->YAB1                  <---------HSFB2a(2) ------>MYB83                    <---------AHL20(2) <---------ATHB12              <---------AHL20(2)  ------------                   --------->AHL20(2)--------->WOX13(1)             --------->AHL20(2)   ------------               <---------AHL20(2)--------->WOX13(1)          --------->MYB59    --------->MYB52(1) --   tgaaaaactcatcgttttaaattttataattttgtcaaccaattatatatacaaaaaatgttttaggtcattttatagaaaaaaacagaataccaaattt  24703700                             --------->ANAC55(2)         <---------WOX13(1)<-----------GT1                     ---------->DOF2 ---->AGL15                <---------AHL20(2)             <---------------AGL15          --------->MYB59 -----AGL15     --------->ANAC55(2)                       --------------->AGL15=============HOX2a_HOX2a =========================================================================MADS_MADS  <------ZmHOX2a(1) ----->AGL1     <---------ANAC46                   ------>NtERF2               ====================== ----->AGL2     <---------ANAC55(2)               <---------PCF2               ------>ZmHOX2a(2)    - ----->AGL3     <---------ANAC58                  <---------PCF5             <---------ARR11(3)     < -------->ID1   <---------ANAC58     <----------DOF2      ----------->GT1  <---------ATHB12  <-------TEIL   agtcccatttgatagatttcgtaatctatttacatgatgcttttatatcatggggccatactgaaaaaagaaggcccatgatccataggattaggcacat  24703800  Previous    Next  AGI:  At5g61410.1    Description:  RPE (EMBRYO DEFECTIVE 2728); ribulose-phosphate 3-epimerase. similar to ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] (TAIR:AT3G01850.2); similar to ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] (TAIR:AT3G01850.1); similar to ribulose-phosphate 3-epimerase transit form [Expression vector pFL505] (GB:AAC24709.1); similar to Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (GB:Q43157); contains InterPro domain Ribulose-phosphate binding barrel Range:  from: 24700832    to: 24703331    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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