Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                         <---------ICU4                                                                   ----------->GT1       <---------AHL20(2)                                                                  <------MYB46(1)        --------->ATHB12                                                                <--------P  <---------ANAC58  <------                                                              <------MYB83  <---------ANAC58  <------                  <-------TEIL                                <------MYB46(1)           --------->ICU4                  <-----------------AG                        <---------MYB46(3)   <---------ANAC46               --------->CCA1(2)                             <---------AtMYB61  --------->ALFIN1       <----------DOF2         <---------YAB1             <-----------RAV1(1)  --------->REM1(2) --------->ATHB12<-----------GT1                  ----------->GT1 <------MYB83--------->ALFIN1<------   tcttgatttcttttttgatatacgtttttggttatttttgtgtttgtttgaattgtgaaactgttggtagggttttaagcgtgtggagtatttattgcgt  24653900                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)   --------->ZAT14                                               <---------ARR11(3)   --------->REM1(2)                            --------->AHL20(2)   <---------ZAT14      ==================HOX2a_HOX2a            --------->ARR11(3) -----DOF2              ------>ZmHOX2a(1)       --------->AHL20(1) ------>ZmHOX2a(2) ---ANAC58   <------MYB46(1)                    <---------AHL20(2)<------ZmHOX2a(2)    ----------->GT1 ---ANAC58  --------->MYB59         --------->YAB1           ---------->DOF2  <---------YAB1 ---ANAC55(2)<------MYB83          <------ZmHOX2a(2)   ----------------->AGL3<-----------GT1   tactgtgtagaaattaggtcattgtccttcaatctcgatcagaagtcaaattttttatctaaaaaaagatcggagtttttttcattgttttgtaatacaa  24654000                  <------ZmHOX2a(2)            --------->MYB52(1)         --------->ANAC55(2)                       <---------YAB1         <---------ANAC58                      --------->ANAC55(2)         <---------ANAC58                     <---------TOE1(3)     <---------WRKY38(1)   <---------AHL20(2)    --------->YAB1       --------->MYB59 --------->YAB1  --------->AHL20(2) <---------YAB1           <---------TOE2(3) <---------YAB1                   <---  <---------AHL20(2) --------->ICU4      <---------ANAC46  <------------CBF                    <----- <---------WOX13(1)--------->YAB1       ---------->ID1   <---------YAB1    <------ZmHOX2a(1)   ------   gtgattaattttcgtaacggatcatgatcaaaattcaattttgtcgtttaggtattaatgtcattgatgatcaacgaggaaatatacacatatttgatca  24654100                                                                                                   <-                                                                                                -----                                                                                                -----                                                                                                <----                                                                                            <--------                                                                                  <---------bZIP60(1)                                                     --------->ARR11(3)           --------->bZIP60(1)                                                     <---------ARR11(3)        <---------YAB1  <-----     ---------->DOF2                                 <---------GLK1(2)     <----------DOF2  --------- ------YAB1              <----------DOF2     <----------DOF2            ---------->ID1      <-------- ----ICU4             ------>ZmHOX2a(1)    <---------YAB1          <---------ARR11(3)       --------- --->YAB1          ---------->ID1 <------------CBF<--------P       --------->ARR11(3)    --------->GLK1(2)   tgactcttaaagtcaacatttgtccttctttgaatgtattgagtcatctttggtagatttttgtctaaagatttgttctttatgatgtcaaattctagaa  24654200                                                                                                  <--                                                                                                  ---                                                                                       <----------DOF2                                                                                      ------>ZmHOX2a(2)                                                                                      ===============    ----------->GT1                                                                  <------ZmHOX2a(2) --------YAB1                                                                        ================ ---->ARR14(2)           ---------->DOF2                                             <---------RVE1(1) ---->GLK1(2)        <----------ID1               <------------CBF                  --------->ARR11(3) -----ARR14(2)     ---------->DOF2              <---------AHL20(1)                  <---------ARR11(3) -HSFC1(1)        --------->AHL20(2)            <---------AHL20(2)                  <---------ARR14(3) ----GLK1(2)      <---------AHL20(2)            --------->AHL20(2)                  --------->AGP1--- >HSFB2a(2) ----------->GT1   --------->GLK1(2) --------->AHL20(1)                  <---------ARR14(2) -HSFB2a(2) --------->ANAC55(2)                --------->AHL20(2)                   --------->ARR14(3) >HSFC1(1)  <---------ANAC55(2)          --------->GLK1(2)                          --------->ARR14(2)   tctgattagtgaataggtaataaaagacaaagaatcagtttagaatccattaaattgttctaatatgctctgttcataaacgtcgagatctttttggtaa  24654300                                                              --------->ARR11(3)           ------>ZmHOX2a(1)                                  --------->AHL20(1)         <-----------------AGL1                              --------->YAB1 -------ZAT18                                            <---------WRKY38(1) ------>ZAT18                                            <---------WRKY12 =================HOX2a_HOX2a                          <-----------HVH21                         <--- =================HOX2a_HOX2a                    <---------ZAT14       --------->GLK1(1)         ---- ------>ZAT14               ------------>CBF<---------ARR14(2)<---------ARR11(3)             --------   tgcactctgtttcctctacaggtttattttgtcaatggctgaagagaatacttcagaggtcaaagatattgagaattcttccgatacaaaccctccgaag  24654400                                    <------ZmHOX2a(1)                                  <---------TOE2(3)                                ---------->DOF2                           <---------ANAC55(2)                           <---------ANAC58                                    --------->ARR11(3)                           <---------ANAC46                           <--------P<------ZmHOX2a(2)                           <---------ANAC58                        <---------AtMYB61                           <---------ANAC55(1)                     --------->ALFIN1 ------ARR11(3)       <---------------AtSPL3                   <---------At4g35610 ----->ARR11(3)       --------------->AtSPL3           <---------ARR11(3)   --------->ANAC58 ->LBD16      <----------DOF2 --------->REM1(2)        --------->ARR11(3)   --------->ANAC58  <------   atgtctgaagaaggctctttggaaacagtacgtgtaaaggatgtggaaaatgtggaagatgttatagctgtggtagccaaggatcaagaagagattatac  24654500                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                            <-------TEIL <---------ANAC46                                          ------>NtERF2                 <---------TOE1(2)<---------ANAC58                                         --------->ANAC46               <---------TOE2(2)<---------ANAC58    --------->ATHB12                     --------->ANAC58              <-----------RAV1(2)--------->TOE1(2)   <---------YAB1                        --------->ANAC58             --------->LBD16  <---------DOF5.7(2)   --------->ICU4                 <----------DOF2                ---------->DOF2     --------->DOF5.7(2) -----GT1                   --------->ALFIN1                  <---------ANAC55(2)    <---------MYB52(1)   cagagattattgaagtgcctaagcctcaaggtgggactttgagacgccattcgactggaacgataagtaaaccgcaggttcagtcccgttatcgtgggaa  24654600                                                                           --------->HSFB2a(1)                                                                           <---------HSFB2a(1)        <---------PCF2                                                --------->ALFIN1       <---------DEAR3(2)                                             <---------------------WRI1     --------->ALFIN1                                                --------->LBD16   <---------ANAC46                                                 <---------ANAC46   --------->ALFIN1     <---------TOE2(3)                           <---------ANAC58               <- ------>YAB1       --------->ATHB12   --------->ANAC58              <---------ANAC58               <- ------HSFC1(2)   --------->ICU4      --------->ANAC58         ---------->DOF2               -------- ------HSFB2a(1)  <---------YAB1--------->TOE2(2)             ----------->HVH21        ---------->DOF2 -----KAN4(2)   --------->YAB1  --------->TOE1(2)           <---------ANAC46    <---------AtLEC2<----   tcatcgtgtgggttcgactcatgatttatgtaaacatgggaagaaatgtgatcaagatgatgctgtgaagccgtggaagattgcaaggagaaagagtgtt  24654700                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                         --------->LBD16                                                                                       <---------LBD16      <---------At4g35610                                                            --------->MYB52(1)      <-------GAMYB                                   <---------ANAC58               ------>MYB46(1)   <-------TEIL                                       <---------ANAC46               ------>MYB83 --------TOE2(3)                              --------->ATHB12 <---------ZAT14     --------->AtMYB61 --------TOE1(3)                       --------->ANAC58 --------->ALFIN1           <---------MYB59 ->ALFIN1 <---------YAB1               --------->ANAC58 <---------ZAT6          <-----------GT1 -----REM1(1)  ---------->DOF2     <---------HSFB2a(2)<---------ANAC58   <-----------RAV1(2)   gaaggttcagttgtgatcaaagttgagacaccaagttcgacaaggaagtcattggggagtgtgagtagacagagtccaggtataaccaaaccggatagtt  24654800  Previous    Next  AGI:  At5g61260.1    Description:  chromosome scaffold protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15046.1); contains InterPro domain Calmodulin-binding, plant (InterPro:IPR012417) Range:  from: 24654335    to: 24655825    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version