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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                  <---------ANAC58
                                                                  <---------ANAC46
                                                                  <---------ANAC58
                                                      <---------AHL20(2)
                                                      --------->YAB1
                                                      -------->ATHB1
                                                      --------->ATHB51     ------->TEIL
                                                      --------->AHL20(2) <---------ABI4(2)
                                                      <--------HAHB4    --------->ANAC58
                                                      <---------ICU4    --------->AtLEC2
                                                     --------->ICU4     --------->ANAC58           -
                                                     <---------ATHB12 <---------AtLEC2             <
     ----------->HVH21                               <---------ATHB51<-------TEIL            -------
------>ATHB51                               <---------ALFIN1    <---------DOF5.7(2)          -------
-------ICU4                                <---------ZAT14    --------->DOF5.7(2) --------->AHL20(2)
------YAB1                <-----------GT1  <---------ZAT18   <----------DOF2      <---------AHL20(2)
--->YAB1              --------->AHL20(2)   --------->ZAT14<---------AHL20(2)     --------->AHL20(2)<
 
taattgttctgacaaaacttgtatttttaatacaattttgaaactctgcacatccaattattttctttaacgtgcatgcaccgatttatttagtagcctt  24632300
                               <---------ICU4
                               -------->HAHB4
                               --------->YAB1
                              <---------ATHB51
                      ------>ZmHOX2a(1)
                      <----------DOF2
                    ------>ZmHOX2a(2)                                         ---------->DOF2
                  --------->ARR14(2)                                       <------NtERF2
                  <---------ARR14(2)                                     --------->RAP2.6(2)
                  <---------ARR11(3)                                   <---------At4g35610
     <---------YAB1<------ZmHOX2a(2)                                <-------TEIL----------->GT1
  <-----------GT1 <---------GLK1(2)                                --------->CCA1(2)
-------->AHL20(2) --------->ARR11(3)                              --------->ARR14(2)
---------ICU4   ----------->ARR10<---------YAB1       <---------At5g28300--------->RAP2.3(3)
-->TOE1(3)    ---------->DOF2 --------->ICU4         <<<<<<<<<GT-2<---------ARR14(2)
-->TOE2(3) <---------TOE2(3)<---------ICU4           <-----------GT1---------->DOF2
---------AHL20(2)--------->RVE1(1)    --------->ANAC55(2)       ----------->ARR10
 
aattttttcttattaagaaaagatcctttactaattatgacacttattttcgctaattaccgatggggagatacagcccccaaaagttacaacggctatt  24632400
                                             <--------ATHB1
                                             <---------ICU4
                                         <---------AHL20(2)
                                   <---------ANAC58
                                   <---------ANAC46
                              <---------TGA1a-------->HAHB4
                              <---------bZIP60(1)
                              --------->TGA1a--------->ATHB51
                              --------->O2  --------->ICU4
                              --------->bZIP60(1)
                              <---------ANAC46
                <----------DOF2    <---------ANAC58
                ========================bZIP_DOF
               <---------DAG2 <---------ANAC58
             ------>NtERF2    <---------O2--------->YAB1 ----------->GT1                --------->ZAT14
          <------MYB46(1)     <---------bZIP60(2)       --------->DAG2                  <---------ZAT14
          <------MYB83        >>>>>>>>>>AtbZIP1        ---------->DOF2               --------->SPL7
         <---------MYB46(3)   ====================================bZIP_DOF        ==================
        <---------WOX13(1)    <---------ANAC58<------------CBF                    ------>ZmHOX2a(2)
       <------------CBF     <---------TGA2(2)--------->YAB1                      --------------->AtSPL8
      --------->ATHB12     ----------->HVH21<---------ATHB51              <-----------GT1     <-----
     <---------YAB1        ----------->TGA1 <---------YAB1               <---------AHL20(2)  <------
 
ttcaaatgctgattggtgccttttcaaatgctgacgtggcttaaataataattgtcgaaaaagtagaatactgtatttaacttgatcgtactacagagga  24632500
      --------->DAG2                                             --------->HSFC1(2)
     ---------->DOF2                                             <---------HSFB2a(1)          ------
  --------->AHL20(2)                                             <---------HSFC1(2)      <---------GLK1(2)
 --------->AHL20(2)           ----------->GT1               <---------ZAT6              <---------At4g35610
=HOX2a_HOX2a          --------->DAG2                 <---------ARR11(3)          <------------CBF<--
-ZmHOX2a(1)          ---------->DOF2                 --------->ARR11(3)          <---------GLK1(2)
----ID1       <----------DOF2--------->DAG2      ---------->DOF2 --------->HSFB2a(1)    --------->At4g35610
 
caaaataaaaaagcagactttgcgaaaagcgaaaggtttcttcgtcaacatggaaagaacttagtggaaacttcttaaaacttagattgtcagattagca  24632600
                    ===========================HOX2a_HOX2a
                    ------>ZmHOX2a(2)
                   ============================HOX2a_HOX2a
                   <------ZmHOX2a(2)
                  <---------ARR14(2)
                  --------->ARR11(3)                                                               -
            --------->ZAT2                                                                       ---
            <---------ZAT2                                                                     <----
           --------->ANAC58                           <----------DOF2                       <-------
     --------------------->WRI1                 ----------->GT1                            <--------
    --------->TOE1(3)                       ---------->DOF2                                <--------
    <---------DAG2<---------ARR11(3)        <---------ZAT14                                ---------
    --------->TOE2(3)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <--------
--->YAB1   --------->ANAC58              ----------->GT1                                   ---------
---------ARR10    --------->ARR14(2)    <------ZmHOX2a(1)                                 <---------CCA1(2)
 
taactcaccttagcaagctccgatcttcgacgagatagtgagaggagtaaagagtaacttttggttcagaaacaagtgtctcttctctctctagtatctc  24632700
                                                                                              <-----
                                                                                              ------
                                                                                              ------
                                                                                              ------
                        <---------ANAC58                                                      <-----
                 <---------ANAC46                                                             <-----
                <------NtERF2                                                                 <-----
               <---------ATERF1(1)                                                            <-----
              --------->ALFIN1                                                                ------
              <---------DEAR3(1)                                                              ------
             <------NtERF2                                                                   -------
             --------->ATERF1(1)                                                             <------
           <---------ANAC46                                                                  <------
           <---------DEAR3(1)                                                                =======
        <---------DEAR3(1)                                                                   -------
        <---------RAP2.3(2)                                                                  <------
       --------->ATERF1(1)                                                                   -------
     <---------ETT(2)   <---------ANAC46                                                     -------
     --------->ETT(2)   --------->ANAC55(2)                                                  -------
    --------->DDF1 <------NtERF2                                                             -------
  <---------bZIP60(1)   <---------ANAC55(1)                                                 --------
---------->HVH21--------->ATERF1(1)                   --------->CCA1(2)          --------->ALFIN1
------>LBD16<---------ATERF1(1)                  <---------ANAC46                ===================
-----LBD16<---------LBD16 ----------->HVH21    <---------MYB46(3)                <--------P<--------
--GLK1(1) --------->ATERF1(1)                  <---------ANAC46                 --------------------
-ARR14(2) <------NtERF2 <---------ANAC55(2)   <---------AtMYB61                <---------MYB46(3)
-ARR11(3)<---------RAP2.3(1)                  --------->ALFIN1        <---------SPL7      <---------ZAT18
>ARR11(3)<---------ATERF1(1)  <----------ID1 <---------ZAT14      <---------ANAC58        --------->ZAT18
---ARR10<---------RAP2.3(3)--------->REM1(2) --------->ZAT14      <---------ANAC46 <------MYB46(1)<-
>ARR14(2)------>NtERF2  <---------ANAC58    --------->ALFIN1      <---------ANAC58 <------MYB83 ----
 
cggtgatgtcgacggcggaggcggattacgtgaaggccaaaacatcggtgtggtgggatatagagaattgcgaggtacccagaggttgggatgcgcacgt  24632800
--PIF4
->PIF4
->MYC4
->MYC3
--PIF5
--MYC4
--MYC2
--MYC3
->MYC2
->PIF5
-->ANAC58
---TGA1a
---ANAC55(2)
===============================bZIP_DOF
-->O2
---O2
-->ANAC58
-->TGA1a                                    ------->TEIL
-->ANAC46                                  <---------TCP16(2)
-->ANAC55(2)                              <---------ZAT18
---->OsbHLH66                       <---------ICU4
===MYC_MYB                          -------->ATHB1                          ------>MYB83
----OsbHLH66                        --------->ATHB51                        ------>MYB46(1)
--->TaNAC69(2)                      --------->ATHB12                       --------->WOX13(1)
--------WOX13(1)                   <---------ATHB51         --------->At4g35610                    -
----->ATHB12        <----------DOF2--------->ICU4           <---------At4g35610              -------
 
gattgccttgaatgtgagttcgtctttgttgaagatgaattattgtggacctgtctcaatttcagcttatggcgataccaatctcatccctctccatcat  24632900
                                                 ------->TEIL
                                --------->YAB1 <---------ZAT18
                                <-----------GT1--------->ZAT18
                           <----------DOF2  --------->At4g35610                                   <-
                   --------->ALFIN1       <-----------RAV1(2)                                     --
      <----------DOF2   <---------ANAC46 <---------At4g35610                                <-------
 --------->ANAC58  <-----------RAV1(1)   <---------ZAT2                                     <-------
 --------->ANAC58  ================================RAV                           <---------MYB52(1)
-------->MYB46(3)  <---------REM1(1)     --------->ZAT2  --------->ANAC46       <-------GAMYB<------
-->YAB1         <-----------RAV1(1)    <-----------RAV1(2)             <---------YAB1   <---------At4g35610
 
caacaagcactttcttctactggtgttgcgcttaatcacatcccagcaggtgtacttctcacaaaacccattttgtgattcgtcgttgtttagatgcttt  24633000
                                                                                                ----
                                                                                               -----
                                                                                               <----
                                                                                              <-----
                                                                                <---------ANAC55(2)
                                                                    ----------->GT1           ------
                                                                    <------MYB83--------->ANAC55(2)
       ---------->ID1                                               <------MYB46(1)           <-----
--------TOE2(3)                            <---------ANAC58        --------->MYB59           <------
-------->ID1                               <---------ANAC58        --------->MYB46(2)      ---------
--ANAC58                                   <---------ANAC46      <---------MYB52(1)        <--------
--ANAC58                                 <---------ANAC46      <---------MYB46(3)          ------>ZmHOX2a(1)
----DOF2              <------------------------ANAC81         <---------TOE2(3)--------->MYB59<-----
 
tgtggtttttgttcttcttggattgggattttgttttgttgattttgtgtgttttttgtttgattttggttaggttattagttatgtattcgtcctggat  24633100
      <---------TOE2(3)
      <---------TOE1(3)
-->ZmHOX2a(2)
---->At4g35610
-----At4g35610                                                      <---------YAB1
----AGP1                                                          --------->YAB1              <-----
--->ARR14(2)                                                     --------->ICU4               <-----
----ARR11(3)                                   <---------YAB1    <---------YAB1               ------
---CCA1(2)                             <-----------GT1        <---------YAB1                 <------
>HSFB2a(2)             ------->TEIL <---------GLK1(1)       ----------->GT1                  -------
-HSFB2a(2)      <----------DOF2   <---------ANAC58      <---------ARR14(2)                   <------
----ARR14(2) <-----------GT1      <---------ANAC58      --------->ARR14(2)                   <------
 
ctgcaattttaggtttttactttctgtatgttgaattgggtttctccattttgattttggatactgtgattataaatctcagtttttaagtagttttcta  24633200
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AGI:  At5g61190.1   
Description:  zinc finger protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17351.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604)
Range:  from: 24632706    to: 24637279    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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