Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ----------->GT1     --------->DOF5.7(1)   ---------->DOF2      <----------DOF2         <           --------->At4g35610 <---------KAN1         <---------KAN1        <---------DAG2      <----  --------->RVE1(2)      --------->DOF5.7(1)    --------->DOF5.7(1)<---------TOE1(3)          <------ -------At4g35610      ---------->DOF2        ---------->DOF2      <---------TOE2(3)         <-------   agcaaatcaaatgggctgaaataacaaaagagaataaggcccagttacaaaagagaataaagttttgttaagggttaacttttttttttgttttcctttt  24577300                        --------->AHL20(1)                        <---------AHL25(1)                        <---------AHL25(3)                        <---------YAB1                        --------->AHL25(1)                        --------->AHL25(2)                        --------->AHL20(2)                        <---------AHL20(2)                        <---------AHL20(3)                        <---------AHL25(2)                       <---------AHL12(3)                       <---------AHL20(2)                       --------->AHL20(2)                       <---------AHL20(3)                       --------->AHL20(3)                       --------->AHL25(3)                       --------->AHL12(3)                       <---------AHL25(1)                       <---------AHL25(2)                      --------->AHL12(2)                      <---------AHL12(2)                     <---------AHL20(3)                     <---------AHL25(2)                     --------->AHL20(3)                   --------->AHL25(3)                                               --------->ANAC55(2)                   <---------YAB1                                                   --------->ANAC46                  <---------AHL20(1)                                          <---------AHL20(3)                  --------->AHL20(2)                                          <---------AHL25(2)                  --------->AHL20(3)                                          --------->AHL25(2)                  <---------AHL20(2)                                          <---------AHL12(3)                  --------->AHL25(2)                                          --------->AHL20(3)                  <---------AHL20(3)                                          <---------AHL12(2) ----  --------->AHL20(2) --------->AHL25(2)                                --------->YAB1            ---- ----------DOF2   <---------AHL25(2)                                 <---------WOX13(2)        <----- -----CCA1(2)    --------->YAB1                                      --------->WOX13(2)        <----- ---DOF5.7(1)   <---------YAB1 ----------->RAV1(1)             <------ZmHOX2a(1)<---------AHL25(3) ---DOF2        <---------AHL20(2)--------->YAB1       <---------TOE2(3)     --------->YAB1 <--------   atcttttaatacttctatattataattttattgcaacaatattcaaactagaagtttaatgtataggattcaattacaaaaattatacgtagttttacca  24577400                            --------->ARR11(3)                            <---------ARR11(3)                            --------->RVE1(2)                            <---------AHL20(1)                  --------->WOX13(2)                  <---------WOX13(2)                --------->AHL20(2)                <---------AHL20(2)        ----------->GT1          <---------AHL20(2)                --------->AHL25(3)    <---------WOX13(2)          --------->AHL25(3)               <- -->MYB46(1)    --------->AHL25(1)    --------->WOX13(2)        <---------DOF5.7(1)               <-- -->MYB83   ----------->GT1 --------->AHL20(1)                 <----------DOF2                    --- ----MYB46(2)   <---------AHL25(1) --------------->AGL15      <---------DOF5.7(1)                 --- ----MYB59 --------->DAG2  --------->RVE1(1)            <---------KAN1   <---------ANAC46         --- ---GT1   ---------->DOF2  --------->CCA1(1)    <---------YAB5--------------------->WRI1       ------   aacttctaagaaaaaagtttaatttcgaaatatctttctaagttaagttaatcttcgaattcttcctttttattttcgtttaaaaaccaaaatagagaga  24577500                                                                    <---------ANAC55(2)                                                                    <---------ANAC58                                                                    --------->ANAC55(2)                                                                    <---------ANAC58                                                                   ------->TEIL                                                                   <-------TEIL                                                        --------->YAB1     <---------YAB1                                     --------->YAB5 --------AHL20(2)                                  --------->MYB46(3) -------AHL25(1)                                 -------->P        --------->SPL7(1) ------>AHL25(3)                              <---------ANAC58   <---------SPL7(1)             <----- ------>AHL25(1)                           <---------KAN1       --------->TOE2(1)          <---------ARR11(3) ------>AHL20(2)                 <---------ANAC55(2)   <---------ATHB12        <---------YAB1<------- ----->GT1                   <-----------HVH21<---------ANAC58  --------->TOE1(1)<---------RVE1(2)   ttaaatcgttataggcttagagctactgggctgtcacataaacgaatgacttacccaatgaaaaccccgtacgtgtctaatatgattttccaaaatcatt  24577600                         <---------ARR11(3)                         --------->GATA12                         --------->ARR11(3)                         --------->ARR11(2)                         <---------ARR11(2)                         <---------GATA12                         <---------ARR14(2)                         --------->AGP1                         --------->ARR14(3)                         <---------AGP1                         <---------ARR14(3)                         --------->ARR14(2)                <---------WOX13(1)              --------->ATHB12             --------->ICU4                                                           --------->ANAC58             <---------YAB1------>ZmHOX2a(2)                                       <---------SPL7(1)     --------->MYB52(1)  <---------RVE1(2)             <---------HSFB2a(2)      --------->MYB52(1)   <-------TEIL<------------CBF                        --------->HSFB2a(2)      <-----------GT1 <---------GATA12       <---------CCA1(2)             <---------LBD16        *TSS  ------->GAMYB --------->GATA12<---------KAN1                    <----------DOF2        <---------TOE2(3) ----YAB1<-----------HVH21<------ZmHOX2a(2)       <---------DOF5.7(1) <----------DOF2 --------->ANAC58 --ICU4 ------->GAMYB  ----------->ARR10  ----------->TBP          ----------->GT1--------->MYB46(3)   ttagattcaacggtcacgattgactcagatcttgcaacttcgctacataaaccctttctgggagaagtagggttttaagttttaacggacgcgagaaatc  24577700                            <---------ZAT14                            --------->ZAT14                                            <----------DOF2                            <---------ZAT18                            <---------At4g35610                         <-------TEIL                               <---------MYB52(1)<---------DOF5.7(1)                     --------------->AtSPL8                   ------->TEIL           <-------TEIL                     --------------->AtSPL3                   <---------GATA12    <---------HSFC1(2)                     <---------------AtSPL3              <----------DOF2          --------->HSFB2a(1)                     <---------------AtSPL8            <---------At4g35610        --------->HSFC1(2)                 --------->ZAT14               <-----------GT1--------->GATA12   <---------TOE1(3)                 --------->REM1(2)    --------->ANAC58 <---------ZAT2  --------->At4g35610      <----                 <---------ZAT14      --------->ANAC58 --------->At4g35610       <---------TOE2(3)<--   <------ZmHOX2a(1) <---------ZAT6<---------REM1(2)   --------->ZAT2 --------->MYB52(2)   <---------   acagaggaagcgaagtcagtgtagaggtacttcactcttcacgctcatttcactctcagctttgaatctcgttagctgttttgaaggttctttcttttct  24577800                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(2)                                                                  <---------TOE2(3)                                                         <----------DOF2                                                        ------>ZmHOX2a(2)                                                        <---------DOF5.7(1)                                                       <------ZmHOX2a(2)                                                      --------->GATA12                                                      <---------GATA12                                                      --------->ARR11(3)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                 --------->ARR14(2)       --------->ZAT14                           --------->ARR11(2)    <---------ANAC58                             <---------ARR11(2)                         ------>ZmHOX2a(1)    <---------ANAC46                             <---------ARR14(2)                        --------->TOE2(3)    <---------ANAC58                          <---------TOE2(3)  <---------At5g28300    <---------ARR11(2)  <---------YAB1           <---------DAG2     --------->MYB59   <-----------GT1  <----------DOF2 -----YAB1                 <----------DOF2<---------GATA12     <---------SPL7(1) <---------DOF5.7(1) -------RVE1(2)<---------MYB52(1)         <---------RVE1(2)  <---------ZAT6      <---------DAG2 -DOF2 <---------ZAT14 ---------->ID1<---------AtLEC2 <---------ARR11(3)      <-----------GT1   gattttgagtgttctctgttatttcttcgcttttcattttcatggatttaggttccgatctttgtgttacggtattgaattcactttttggttccttagt  24577900                                                   --------->GATA12                                        ---------->ID1                                     <---------WOX13(1)                                    <---------RVE1(2)     <---------DOF5.7(1)      ------->TEIL                                    >>>>>>>>>ARR2<---------TOE1(3)         --------->DAG2       <----                                  <---------YAB1 <---------TOE2(3)        ---------->DOF2       <----                                <----------DOF2  <---------YAB1           --------->DOF5.7(1) <------                           ---------->DOF2     <-----------GT1    --------->DOF5.7(1)         -------      ------->TEIL  ----------->GT1--------->ATHB12<---------GLK1(2) ----------->GT1        <--------   agttcatgtatttgcagagtacgagttaaaaaagctttgattgtcgtttttaagattcccttcttcttaagggggaaaaagtatgaaacttgctaatttc  24578000                        <--------HAHB4                        --------->YAB5                                                           <---                        --------->ATHB12                                                        <----                        --------->YAB1             <------NtERF2                      <---------WOX13(2)                        <---------ICU4             <---------At4g35610           --------->ARR11(3)                       <---------YAB5              --------->At4g35610           --------->RVE1(2)<--                       <---------YAB1             <---------MYB46(3)            <---------GLK1(1)----                       --------->ICU4      <---------ARR14(2)                   --------->GLK1(1)==== -----ANAC58         --------->YAB1        --------->ARR14(2)                  <---------ARR11(3)<--- -----ANAC58      <---------bZIP60(1)      <---------ARR11(2)            <---------YAB1         <---- ---AHL20(2)      --------->bZIP60(1)  <-----------GT1            <----------DOF2<---------ARR11(3) -->ARR11(3)    --------->YAB1      --------->WOX13(2)          ---------->ID1 --------->ARR11(3)<--- -WOX13(2) <------ZmHOX2a(1)  <----------DOF2 <-----------RAV1(1)<---------DOF5.7(1)  --------->WOX13(2)   ttgatagaaaataggaaatgatatcatcattactttgaaattgactatctggtggctgaagtatttgtctttttcatgctagatatctaattgcgatggc  24578100                                                                                              -------        --------->KAN1                                                                        -------    ----------->GT1                                                                    --------->ANAC46 ------------AGL15                                                               <---------DOF5.7(1) -----ANAC58 --------->HSFB2a(2)                                                <----------DOF2  ---- -------DOF5.7(1)                        --------->ANAC58             --------->ANAC58 --------->ANAC58 ----------->AGL15         <---------At4g35610          <---------TOE1(3)       <---------DAG2<------ ===============================================================================================MADS_MADS ------DOF5.7(1)   --------->ARR11(3)    --------->ANAC46             --------->ANAC58 --------->ANAC58 -----ANAC58 <---------HSFB2a(2)         --------->ANAC58      <----------DOF2  --------------->AGL15 -------DOF2<---------LBD16--------->At4g35610         <-----------RAV1(2)      <---------DOF5.7(1) -   ttttttgagtaaattcgggaacatattgaagcagaccacaaacaagcaactcaatgctcaggtttctttatcaagcccttcgctttttcaagcaataagg  24578200  Previous    Next  AGI:  At5g61030.1    Description:  GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding. similar to GR-RBP5 (glycine-rich RNA-binding protein 5), RNA binding [Arabidopsis thaliana] (TAIR:AT1G74230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64431.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71872.1); contains InterPro domain RNA recognition motif, glycine rich protein (InterPro:IPR015465); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 24577677    to: 24579532    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
	printer-friendly version