Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------MYB46(3)                  --------->MYB111(2)                  --------->MYB55(2)                <---------ANAC58                <-------GAMYB       ---------->DOF2     --------->WOX13(1)    --------->At4g35610  <------ZmHOX2a(2)  ==============================HOX2a_HOX2a  <------ZmHOX2a(1)<-------GAMYB                               ----------->GT1 ------->YAB1   <---------ANAC58                 <---------At4g35610 ----------RAV1(2)--------->MYB111(1)            --------->At4g35610                           <----- ----->GLK1(2) <---------MYB46(3)                ----------->RAV1(2)                        <--------   atcaggagctaaagccttggttgttggatcaatcgacaaattatgtagcacatctgaaacatctatagaaaaaaacaatgaaggaataacaaaatttatg  24576700                                           <---------YAB1                                   --------->ARR14(2)                                   <---------ARR14(2)                             --------->ANAC46                             --------->ANAC58                             <---------AHL20(2)                             --------->ANAC58                        <---------TOE2(3)    <-----------GT1    <------ZmHOX2a(2)--------->ANAC58      ---------->DOF2                   ----- ----YAB1             --------->AGP1 --------->MYB46(3)   --------->TOE2(3)           --------------- -AHL20(2)           --------->At4g35610--------->ANAC58  --------->TOE1(3)  <---------YAB1 ---------   attttttcacgagtcaaaacatcagatcaacaaggaagaaccacgataattcttcataaaccctaaaagttaagaatttatgaacgatttacaaaaaaat  24576800               ------>ZmHOX2a(2)              --------->CCA1(2)                                    --------->ZAT2             <---------AGP1                                        <---------ZAT2             <---------ARR14(2)                                <------ZmHOX2a(2)             --------->AGP1                                   --------->AGP1             <-----------ARR10                                --------->ARR11(3)             --------->ARR14(2)                               --------->ARR14(2)             <---------ARR11(3)                          ----------->RAV1(1)   ---------->DOF2                                    --------->MYB52(1)                      <------ ---->AHL20(2)<------ZmHOX2a(2)                     <---------MYB52(2)               <---------At4g35610 --------->ANAC81                             ---------->DOF2 <---------ARR14(2)     --------->At4g35610 >AHL20(2)   --------->ARR11(3)          ----------->GT1--------->MYB46(3)      <---------GLK1(1)<---   aaaaacaaagaagaagatctaaatccatcgtagaaaaacaagagtgtcaaaagaactaacaacagatccagctagaatgaagaaatcagcttatatttaa  24576900                                                                                               <-----                 <---------HSFC1(2)                                                            ------                 --------->HSFB2a(1)                                                          <------                 --------->HSFC1(2)                                                           -------                 <---------HSFB2a(1)                                                         <------ZmHOX2a(1)                --------->ARR14(2)                                                      <-----------HVH21                <-----------ARR10                                                   --------->CCA1(2)                <---------ARR11(3)                                                  --------->ARR14(1)                --------->GLK1(2)                                                  --------->ARR14(2)                --------->ARR11(3)                                                 --------->ARR11(1)           ---------->DOF2   ---------->DOF2                                       <---------ARR14(2) ---AHL20(2)    <---------ARR14(2)                 --------->DAG2                 <------ZmHOX2a(1) --------GT1   <---------GLK1(2)  <----------DOF2 ---------->DOF2               <---------TOE2(3)   aaccctctgaacaaaaagaatcttcttagaagaaagctttgacaaaaactcataaagcaaatacaaatagacacagataatgaaggatacggtcaggatt  24577000                               --------->ARR14(2)                               <---------ARR14(2)                             --------->LBD16                            <---------ANAC46                           <---------LBD16                           --------->At4g35610                           <------NtERF2                          <---------RAP2.3(1)         <---------ZAT14 <---------RRTF1(3)         --------->ZAT14 <---------DEAR3(1)                                                 <--------        <---------ANAC58 <---------RAP2.3(2)                                              --------->MYB52(1)        <---------ANAC46 <---------RAP2.6(2)                                         ----------->HVH21        <---------ANAC58<---------At4g35610                                        ----------->RAV1(2)       <------NtERF2  ---------->CDC5                                            --------->ANAC58     <---------RAP2.3(3)--------->At4g35610                                      --------->ANAC46 ----GLK1(1)        <---------ANAC58                                             --------->ANAC58 --->GLK1(1)        <---------ANAC46                                           <---------DOF5.7(2) ---ARR14(2)        <---------ANAC58   <---------REM1(1)                      --------->ARR14(2) -->ARR14(2)  --------->ATHB12<------NtERF2 <------ZmHOX2a(1)                 <---------ARR14(2)   tgccatggctgcgtagtgagtggcttagcggcggaaacttgttgtaggagagaatgagaaaatgtgagagagagagagagtaaacgcctgactagcggag  24577100                      <----------DOF2                      <---------DAG2             --------->ANAC58             --------->ANAC58       --------->TOE2(3)                         <-----------GT1       --------->TOE1(3)                  <---------ANAC58     <---------ANAC46    *TSS     --------->ANAC46             <---------ANAC58     <---------ANAC58 --------->ANAC46 --------->MYB46(3)      <---------ANAC46     <---------ANAC58        <--------P -ANAC46   ---------->DOF2               <---------LBD16    <----------DOF2   <---------YAB1      <--   accacaaaaccctaaaagcaacaactttttgagtatttcatgtttcgggtttaacccattcactttcgggtcaaaataatgtgattcgggttgcattttc  24577200                                                                            <----------DOF2             ----------->GT1                                       <---------TOE1(3)                <           --------->At4g35610                         ---------->DOF2      <---------DAG2      <---- -------At4g35610      ---------->DOF2        ---------->DOF2      <---------TOE2(3)         <-------   agcaaatcaaatgggctgaaataacaaaagagaataaggcccagttacaaaagagaataaagttttgttaagggttaacttttttttttgttttcctttt  24577300                        <---------AHL20(2)                        --------->AHL20(2)                        <---------YAB1                        --------->AHL20(1)                       --------->AHL20(2)                   <---------YAB1                  <---------AHL20(1)                                                             ----                  <---------AHL20(2)                                                             ----                  --------->AHL20(2)                                                           <-----  --------->AHL20(2)   <---------AHL20(2)                                           --------->ANAC55(2) ----------DOF2  --------->YAB1                                        --------->YAB1          <----- -----CCA1(2)   <---------AHL20(2)--------->YAB1               <------ZmHOX2a(1)    --------->ANAC46 ---DOF2        <---------YAB1 ----------->RAV1(1)     <---------TOE2(3)     --------->YAB1 <--------   atcttttaatacttctatattataattttattgcaacaatattcaaactagaagtttaatgtataggattcaattacaaaaattatacgtagttttacca  24577400                            <---------AHL20(1)                            <---------ARR11(3)                            --------->AHL20(1) -->MYB83       --------->AHL20(2)        ----------->GT1 -->MYB46(1)----------->GT1 --------->ARR11(3)                           <---------ANAC46 ----MYB59 --------->DAG2  --------->RVE1(1)                       <---------AHL20(2)              <- ----MYB46(2)   <---------AHL20(2) --------------->AGL15       <----------DOF2                    --- ---GT1   ---------->DOF2  --------->CCA1(1)                  --------------------->WRI1       ------   aacttctaagaaaaaagtttaatttcgaaatatctttctaagttaagttaatcttcgaattcttcctttttattttcgtttaaaaaccaaaatagagaga  24577500                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC55(2)                                                                    --------->ANAC55(2)                                                                   --------->SPL7                                                                   ------->TEIL                                                                   <-------TEIL                                                        --------->YAB1                                                   --------->MYB46(3)     <---------YAB1                              -------->P      <---------SPL7 --------AHL20(2)                             <---------ANAC58  --------->TOE1(1)              <----- ------>AHL20(2)                 <---------ANAC55(2)   <---------ATHB12        <---------YAB1<------- ----->GT1                   <-----------HVH21<---------ANAC58  --------->TOE2(1)          <---------ARR11(3)   ttaaatcgttataggcttagagctactgggctgtcacataaacgaatgacttacccaatgaaaaccccgtacgtgtctaatatgattttccaaaatcatt  24577600  Previous    Next  AGI:  At5g61020.1    Description:  ECT3 (evolutionary conserved C-terminal 3). similar to ECT2 [Arabidopsis thaliana] (TAIR:AT3G13460.4); similar to ECT2 [Arabidopsis thaliana] (TAIR:AT3G13460.2); similar to ECT2, protein binding [Arabidopsis thaliana] (TAIR:AT3G13460.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96645.1); contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 24574427    to: 24577104    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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