Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->ANAC58                          --------->ANAC46                          --------->ANAC58                         <---------ATHB12                         <---------LBD16                   --------->KAN4(2)                        --------->MYB52(1)                <---------KAN4(1)         --------->ANAC58                     --------->ANAC46                 --------->ICU4             <---------ARR14(2)                     <---------ALFIN1            <---------ANAC55(2)             --------->ARR14(2)                     --------->ANAC58            --------->ANAC55(2)--------->YAB1<-----------GT1 ---                     --------->ANAC58       ------->GAMYB<---------YAB1      --------->ZAT14      --- ----ZmHOX2a(1)    --------->AtMYB61        --------->AtMYB61    --------->WOX13(1) --------->ANAC58 ----LBD16         <---------ALFIN1        --------->MYB46(3) --------->TOE2(3)----------->ARR10 ---- ------RAV1(2)  --------->YAB1            <xxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------ZAT14---------   ggagcaagagactgacaatgaccacaccacggagcataaaactcaaccaaaacgtattgattattctcaatcacatcagtgaagttacgctccttgataa  24390900                                <---------DOF5.7(2)                                --------->MYB52(1)                               ----------->HVH21                              --------->DOF5.7(2)                             <---------DEAR3(2)                            <---------DEAR3(1)        --------------->AGL15                           <------NtERF2             ----------------->AG                          ------>NtERF2              ----------------->AGL1                         <---------DEAR3(1)          <-----------------AGL1                         --------->DEAR3(1)    --------->LBD16     --------->ARR11(3)                         <---------ANAC46    <---------LBD16----------->GT1                       <---------ATERF1(1) --------->GLK1(2)====================HOX2a_HOX2a                       ------>NtERF2       --------->ARR14(2)      <---------ARR11(3)                       --------->LBD16 ------>ZmHOX2a(2)    ------>ZmHOX2a(2)                       - ------>TOE2(3)       <---------DEAR3(1)   <---------ARR14(2)----------->GT1                        - ---->GAMYB          <---------LBD16 --------->ARR14(2)   <---------AGP1 ------>ZmHOX2a(1) ---------- ----->MYB46(3) --------->WOX13(1)   <---------ARR14(2)   <---------ARR14(2)               <-------GAMYB >YAB1 <----------DOF2--------->ANAC46<------ZmHOX2a(2)   --------->ARR14(2)      <-----------TGA1  <   ccacaacgtctttctcatcaatctccggcgtcggtaacggatcggaatccggattacctagatcggaaaaatctccttcttcatcgtcatcgtcgttgta  24391000             <<<<<<<<<TBF1                                              <---------DOF5.7(2)        =======================HOX2a_HOX2a                            <------NtERF2                ==        ------>ZmHOX2a(2)                                            ------>NtERF2                 ==        ====================HOX2a_HOX2a                              --------->HSFB2a(2)        -----       ========================HOX2a_HOX2a                           --------->LBD16            <----       =====================HOX2a_HOX2a                             <---------LBD16         ------>ZmHOX2a(2)       <---------HSFB2a(1)                                          <---------ANAC46        =========       --------->HSFB2a(1)                                         <---------LBD16          =========       <------ZmHOX2a(2)                                           <------NtERF2           <------ZmHOX2a(2)      <---------ARR14(3)                                         --------->DEAR3(1)        ==========      --------->ARR11(3)                                        --------->ATERF1(1)        ==========      --------->ARR14(3)                                        <------NtERF2             --------->ARR14(3)      <---------ARR11(3)                                        --------->At4g35610       <---------ARR14(3)      <---------ARR14(2)                                       <---------ATERF1(1)        --------->ARR11(3)      --------->ARR14(2)              <---------ARR14(2)      ---------->CDC5             <---------ARR11(3)  <---------LBD16                <-----------HVH21            <---------WRKY38(1)         <---------ARR14(2) -------->ARR14(2)           --------->ARR14(2)  <------ZmHOX2a(1)------>NtERF2           --------->AGP1 -------->MYB52(1)           <---------ARR14(2)<---------TOE2(3)<---------At4g35610       --------->ARR14(2) ----------->WRI1       ------>ZmHOX2a(1)  <---------At4g35610<---------WRKY12      <----------DOF2<- ---------ARR14(2)   ------>ZmHOX2a(1)--------->ARR14(2)    <-----------HVH21       -----------------   catatcgggatcttcttcttctcctccttcgaattcgtcaaatccagttgaggaagagagtgagtcagcgccgggaacgtcgtcttctttgagatcttcg  24391100            ------>ZmHOX2a(1)          ==============================HOX2a_HOX2a         <------ZmHOX2a(2)         ===============================HOX2a_HOX2a        <---------GLK1(2)        <---------ARR11(3)        <---------ARR14(2)        --------->ARR14(2)        --------->ARR11(3)        --------->AGP1       --------->GLK1(1)       <---------GLK1(1)      ----------->ARR10  --------->ZAT2          <-----------HVH21  --------->At4g35610    <---------DEAR3(1)  <---------ZAT2    <---------DOF5.7(2)  <---------At4g35610  <-----------HVH21 ===============HOX2a_HOX2a ================HOX2a_HOX2a<---------DEAR3(1)                 <------NtERF2 ---->HSFB2a(2)    <---------WRKY45                     --------->MYB52(1)         <---------MYB46(3) -----HSFB2a(2)    <---------WRKY38(1)              <------ZmHOX2a(1)            --------->At5g28300 =====HOX2a_HOX2a  <---------WRKY12       <------NtERF2<---------ARR14(2)       <---------ANAC46 ==================HOX2a_HOX2a   <------ZmHOX2a(1) ----------->GT1            <---------ZAT14 ==================HOX2a_HOX2a<------NtERF2  ---------->DOF2  --------->LBD16 --------->ZAT14 =====HOX2a_HOX2a --------->DOF5.7(2)     --------->RAP2.3(1)<---------DEAR3(1)<---------DEAR3(1) -----ZmHOX2a(1) --------->TOE2(3)     --------->At4g35610   <---------ANAC46 --------->ZAT18  <----- ---->WRI1------>ZmHOX2a(2)<------NtERF2<---------DEAR3(1)  <---------LBD16  --------->ALFIN1--------   aggaagctgagatcctcatcgtcaacgtcgtcggaggaagaagcggcgaaagaaggagaaacggcggagaagatgagaagtgcggtgagtgagaagagga  24391200                                                   --------->ANAC55(2)                                                   --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------MYB52(2)          --------->ANAC58                         --------->ANAC46          --------->ANAC58                         ----------->GT1          --------->ANAC46                         <---------ANAC55(2)        <---------ARR14(2)           <-------GAMYB --------->ANAC55(1)        --------->ARR14(2)          --------->MYB55(2)       <---------SPL7               --------->MYB111(2)      --------->LBD16               <---------MYB46(3)  --------->MYB46(3)     --------->ANAC58              <--------P      --------->ANAC58     --------->ANAC58         <---------ZAT2 ------>ZmHOX2a(2)                                  <----     --------->ANAC46       <---------PCF2  --------->CCA1(2)                             <----------    <---------LBD16        ----------->HVH21<------ZmHOX2a(2)                             --------->HSFB2a(2)    >>>>>>>>>>AtSR1    <---------ANAC58    --------->AGP1                                 <---------HSFB2a(2) -ZmHOX2a(1)           <---------ANAC58    --------->ARR11(3)      ------------>CBF  <----------DOF2 ->ALFIN1--------->SPL7--------->ALFIN1    <---------ARR11(3)   *TSS              <-----------GT1   gcaaaacgcggaacgccattttagtgtgtgcgacctggttgttgagatctaacaagtaacaactacgagtacaatacaagcttgtttcttttctagtaca  24391300                                               -------->ATHB1                                               --------->ATHB51                                               --------->ATHB12                                               <---------ICU4                                              <---------ATHB51                                              <---------AHL20(2)                                              --------->ICU4                                              --------->AHL20(2)               <---------ATHB12            --------->AHL20(1)           <---------MYB59                 <---------AHL20(2)        <-----------GT1                    --------->AHL20(2)   <-------GAMYB                    <------ZmHOX2a(2)               <--------HAHB4              <----  --------->MYB52(2)              <------ZmHOX2a(1)        ----------->TBP                 --------->AHL20(1)  <---------MYB46(3)   <---------DEAR3(1) <---------AHL20(2)        --------->YAB1         <---------AHL20(1) --------CBF ------>MYB46(1)    <---------TOE2(3)<---------YAB1    <---------AHL20(2)     --------->AHL20(2) -----AtSPL8 ------>MYB83<------NtERF2    --------->AHL20(2)       <---------YAB1  ----------->GT1   ttgttcgttgttaccaaatcaaacgtcgtcgttttaggatcaaattaaattattagggactataaatctataattaagtcttaaccagaaaaatatataa  24391400                    ------>MYB83                                                             --------        --------->AHL20(2)                                                            --------->ARR14(3)        <---------AHL20(2)                                                            --------->ARR11(3) ------>MYB83       --------->MYB52(1)          <-----------GT1                       --------->GLK1(2) ------>MYB46(1)    ------>MYB46(1)  ----------->HVH21                  --------->YAB1<---------ARR14(3) -------GT1       <---------MYB59  <----------DOF2             --------->YAB1         <---------ARR11(3)   accgaacaaattaaactaaaccgaaccgaaatgttttctttgacacattgtaacgttctacataatcaaaacaatagaaatttgacaaaatcttgaaaag  24391500                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                       <-------MYC3                                                                       ------->MYC2                                                             <---------ARR11(3)                    --    ---------->DOF2                         ----------->HVH21--------->ARR11(3)                    <-  <---------YAB1                 <-----------HVH21    <---------ZAT18  ------->MYC3           <------ -->DOF2                         <-----------TGA1     <---------LBD16  <-------MYC2    ---------->DOF2   agtaatgaaagaagtatgtttttggtatatttaagcgtcagagtgagtgacaatagtgcggatgatattagcacgttgtttcttgatcacaaagtagatt  24391600                                                           ------>ZmHOX2a(1)                                                          --------------------->WRI1                                                       ------->PIF5                                                       <-------PIF5                                                      --------->ANAC58         <---------GLK1(1)      --------->ZAT6        --------->ANAC58         --------->CCA1(2)   ------>ZmHOX2a(1)        --------->ANAC46                             <-     XXXXXXXXXXXXXXXXXXXX>MIR1886.1                   --------->bZIP60(2)                          -- ---->ZmHOX2a(1)            <---------MYB59         <---------ALFIN1                    <---------ANAC58 --------------AGL15  ---------->DOF2       <---------MYB46(3)                          <---------ANAC58 ---GLK1(2)       ---------->DOF2         <---------MYB52(1)   <<<<<<<<<TBF1            <---------ANAC46   cctaatgagagaaatgcgatgaaagaaagtcctaacactactccgatggtttctccacgtccttcttcttctcgtcgactctcacttgttgtgtgttcgt  24391700               <---------ANAC58               <---------ANAC58               <---------ANAC46                                                                <-----         <-----------GT1                                                            --------->ARR11(3)       <----------DOF2<---------ARR14(2)                                            --------->ARR14(2)    ------->TEIL      --------->GLK1(2)                           ---------->DOF2   <---------ARR14(2) --------At4g35610    ------->TEIL                          ---------->DOF2        <------ZmHOX2a(1) ------->At4g35610    --------->ARR14(2)            --------->ALFIN1   --------->LBD16  <---------AtMYB61   ctgatgaaactttacttccttgtgaatctggttctacaatagatgtttttgaaggtgaaggtgaaagtgaaagcggagaaggcgaggattttggtggatt  24391800  Previous    Next  AGI:  At5g60640.1    Description:  ATPDIL1-4 (PDI-LIKE 1-4); thiol-disulfide exchange intermediate. similar to ATPDIL1-3 (PDI-LIKE 1-3), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G54960.1); similar to protein disulfide isomerase precursor [Oldenlandia affinis] (GB:ABS11216.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21842.1); similar to unknown [Populus trichocarpa] (GB:ABK94380.1); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin Range:  from: 24388185    to: 24391264    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g60650.1    Description:  unknown protein Range:  from: 24391418    to: 24392024    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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