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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR14(2)
--------->
ANAC46
<-------
GAMYB
<---------
At5g28300
=====================
MYC_MYB
-------
--------->
MYB52(2)
<-----------
GT1
--------->
At4g35610
<--------
P
<---------
TGA1a
--------->
DEAR3(2)
<---------
ANAC46
--------->
TGA1a
<---------
At4g35610
--------->
ALFIN1
<---------
ANAC58
--------->
ATERF1(1)
--------->
ALFIN1
----------->
HVH21
--------->
MYB52(1)
<---------
DEAR3(1)
<---------
ANAC58
<-----------
GT1
<---------
AtMYB61
--------->
SPL7
<---------
WRKY38(1)
<---------
DEAR3(1)
--------->
LBD16
--------->
ATERF1(1)
<---------
ARR14(2)
<---------
SPL7
<---------
TOE2(3)
----------->
HVH21
--------->
ARR14(2)
--------->
DEAR3(1)
<-----------
HVH21
----------->
HVH21
<---------
LBD16
<---------
LBD16
<---------
ANAC46
<---------
DEAR3(1)
------
NtERF2
<---------
AtMYB61
--------->
ICU4
<-----------------------
TaNAC69(2)
--------->
DEAR3(1)
------->
LBD16
<------
MYB46(1)
<---------
ARR11(3)
<---------
DOF5.7(2)
--------->
At4g35610
-------
ANAC46
<---------
MYB46(3)
<---------
ICU4
<---------
MYB46(3)
<---------
LBD16
------>
ETT(1)
<------
MYB83
<---------
O2
<---------------
AGL15
<---------
DEAR3(1)
------
LBD16
========================
MYC_MYB
----------------->
AGL1
<------
ZmHOX2a(1)
<------
NtERF2
ccggagacggtggtgttggttacgccggacgtgatatttacggtattgccactggtggtaacgttgagaggaaaatgtccatcggcggagtcaccggcct
24343500
<---------
O2
--------->
ANAC58
--------->
O2
----------->
GT1
--------->
ANAC58
<---------
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC55(1)
<----
<-------
GAMYB
<------
ZmHOX2a(1)
XXXXXXXXXXXXXXXXXXXXX>
MIR848
------
----------->
GT1
----------------------->
TaNAC69(2)
<-----
--------->
LBD16
<---------
ANAC46
--------->
ANAC46
--------
<---------
LBD16
--------->
ATHB12
--------->
ANAC55(2)
------->
TEIL
<---------
MYB46(3)
---->
RAV1(2)
--------->
ANAC55(2)
<---------
TOE2(3)
----------->
HVH21
<-----------
RAV1(1)
-
gagtccggagagggttacttattgtttggaagtttgaggaagagacgtaacttggtatgacatgaaactgaataagctctacttgttgctcatcggttaa
24343600
<---------
LBD16
<----
<-----------
HVH21
<-----
-----
TOE2(3)
<---------
DEAR3(1)
<-----
--->
MYB52(1)
<---------
WRKY12
--------->
MYB52(2)
----
DOF5.7(2)
<----------
DOF2
<------
ZmHOX2a(1)
<-----------
RAV1(1)
<-----
->
DOF5.7(2)
------>
NtERF2
----------->
HVH21
--------->
ARR14(2)
<------
NtERF2
<-------
------>
TEIL
--------->
LBD16
<---------
WRKY38(1)
<---------
ARR14(2)
--------->
ETT(1)
<---------
ZAT6
cgaatttagggtcccggctttgagaccggtgaacgaggaatcactcggtgcgaatatagtgattccattgtcggagttgtttagttggccgtagagttgg
24343700
<------
NtERF2
--------->
ATERF1(1)
<---------
LBD16
------>
NtERF2
<---------
PCF2
--------->
TCP16(1)
<---------
PCF5
--------->
TCP15(1)
--------->
TCP20
<---------
TCP15(2)
<------
NtERF2
--------->
ATERF1(1)
--------->
ALFIN1
------>
ZmHOX2a(1)
<
<-----------
RAV1(1)
<---------
PCF2
<------
NtERF2
--------->
ZAT2
--------->
MYB52(2)
<------
NtERF2
--------->
ZAT14
--------->
At5g28300
<---------
MYB46(3)
<--------
---
GAMYB
--------->
At4g35610
--------->
At4g35610
<-----------
RAV1(1)
--------
----
MYB46(3)
<------
ZmHOX2a(1)
<-----------
GT1
--------->
ARR11(3)
--------->
TCP15(1)
<--
-
MYB46(1)
<---------
ARR14(2)
----------->
GT1
<----------
DOF2
<---------
DOF5.7(2)
<---------
MYB46(3)
-
MYB83
--------->
ARR14(2)
<---------
DEAR3(1)
<------
ZmHOX2a(1)
<---------
MYB46(3)
-----
-
P
<---------
ZAT14
<-------
GAMYB
--------->
WRKY38(1)
--------->
MYB59
<---------
ARR14(2)
----
ttagcgactccagtggatttgaggagtcggatgaagacggtgaattgaccagctttctctaggattttggtaacgtttgtgggtcctggtggggccggag
24343800
<---------
MYB46(3)
<---------
AtMYB61
<---------
ANAC46
<---------
MYB46(3)
--------->
ALFIN1
<---------
AtMYB61
--------->
LBD16
--------->
HSFB2a(2)
<---------
ANAC58
<---------
ANAC46
--------->
At5g28300
--------->
HSFC1(2)
<---------
HSFB2a(2)
<---------
DEAR3(1)
<---------
KAN4(1)
--------->
At4g35610
<---------
ANAC58
<---------
ORA47(1)
<---------
HSFB2a(1)
------>
NtERF2
<---------
LBD16
<------
ZmHOX2a(1)
--------->
HSFB2a(1)
---------
DEAR3(1)
<---------
LBD16
--------->
ALFIN1
--------->
KAN4(1)
-
DEAR3(1)
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
HSFC1(2)
->
LBD16
--------->
ARR14(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
<---------
AtLEC2
-------
ATERF1(1)
<---------
GLK1(1)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
--------->
KAN4(2)
---->
DEAR3(2)
<------
ZmHOX2a(1)
<---------
ANAC46
----------->
GT1
<---------
KAN4(2)
------->
HVH21
--------->
CCA1(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
<---------
YAB1
cgacggctggagagggctgagataggattccgggagtggtggtgaggaggaggaggacggtgaagaggaggatgatgagagaatgttccat
ggctctgtt
24343900
<------
MYB46(1)
----------->
GT1
<------
MYB83
<---------
MYB46(3)
---
<---------
WOX13(1)
<----
*
TSS
<------------
CBF
<------
<---------
ANAC58
<---------
LBD16
<---------
WRKY38(1)
<---------
ANAC46
--------->
ALFIN1
<---------
WRKY12
<---------
YAB1
<------------
CBF
--------->
ATHB12
<---------
ARR11(3)
--------->
ALFIN1
<---------
ANAC58
----------->
GT1
<------------
CBF
--------->
WRKY18(1)
ttcaagagtgttgatattttgtttgtgt
gagtttatatgaagagtaaggggttatattgaactgggggaaattgattggttaagaggtcaacatatttta
24344000
--------->
ATHB12
<---------
ICU4
-------->
ATHB1
--------->
ATHB51
--------->
ANAC46
--------->
ICU4
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC58
<---------
WOX13(1)
<---------
AHL20(2)
-------->
P
--------->
ICU4
<---------
ANAC58
<---------
YAB1
------>
MYB83
<---------
ANAC58
<---------
ICU4
------>
MYB46(1)
<------------
CBF
--------->
YAB1
<---------
DAG2
<---------
YAB1
--------->
ATHB12
<---------
ATHB12
<---------
ANAC58
--------->
AHL20(1)
------>
MYB46(3)
------------>
CBF
<---------
ANAC55(2)
--------->
AtLEC2
-
-------
GT1
----------->
GT1
--------->
ICU4
<---------
ANAC58
<---------
AHL20(2)
-----
---
AHL20(2)
<-----------
GT1
<-----------
GT1
<----------
DOF2
<---------
ATHB51
<----------
DOF2
-
acaactaagttgattgttaataaccaatgatgattttatcacatgaattgctttacctacaggcaaaattattggatatatagaagcctttatgccattg
24344100
--------->
MYB52(2)
<------
MYB83
<---------
MYB46(3)
<------
MYB46(1)
<--------
P
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<-------
GAMYB
<------
MYB46(1)
--------->
MYB52(2)
--------->
MYB55(2)
---------->
ID1
<------
MYB83
<------------
MYB.PH3(1)
<---------
MYB46(3)
--------->
At5g28300
<----------
DOF2
--------->
ATHB12
---------->
DOF2
<-----------
GT1
<---------
AtMYB61
<---------
TOE2(3)
-------->
ANAC58
<----------
DOF2
<-----------
RAV1(1)
<----------
DOF2
---->
YAB1
<--------
P
<---------
DAG2
<---------
YAB1
----------->
GT1
-------->
ANAC58
<-----------
GT1
<---------
AHL20(2)
<---------
TOE2(3)
<---------
ataagcaaaggggtaactgtttacttttttcttttttggttttattgttggttggatagttgtattttgtggtttaatgtaatggttttagatttaccag
24344200
--------->
ARR11(3)
--------->
WOX13(1)
<
<---------
ARR11(3)
<---------
AHL20(2)
---
<---------
GLK1(1)
--------->
AHL20(2)
<--
--------->
GLK1(1)
--------->
AHL20(2)
<------
MYB83
---
--------->
YAB1
---------->
DOF2
----------->
GT1
----
--------->
YAB1
----------->
GT1
--------->
ICU4
<------
MYB46(1)
<---
--------->
ICU4
--------->
DAG2
----------->
GT1
<--------
P
<---
--
GT1
<---------
AHL20(2)
---------->
DOF2
--------->
DAG2
>>>>>>>
ZML2
<--------
ttatatatgtaaatgtaagaatgatatcttctcttaaaaaaagggaaactaataaagtaattaatcaggttctagttggtaacatttgaaatagagctaa
24344300
<-----
----------->
GT1
<-----
--------->
YAB1
<-----
---------
YAB1
<------
MYB46(1)
<-----
------>
YAB1
<------
MYB83
--------->
ATHB12
-------
ICU4
<---------
MYB46(3)
<-------
GAMYB
--------->
YAB1
----->
HAHB4
--------->
MYB55(2)
<-----------
RAV1(1)
<---------
ICU4
----->
ICU4
--------->
ZAT6
--------->
ANAC46
<---------
ATHB12
------
ATHB12
<---------
YAB1
----------->
GT1
--------->
ALFIN1
----------->
GT1
------
ATHB51
--------->
AHL20(2)
<---------
YAB1
------->
TEIL
--------->
ALFIN1
---------->
DOF2
-
At4g35610
<---------
AHL20(2)
----------->
HVH21
<-----------
GT1
----------->
GT1
--------->
ICU4
taatgaaaatgtataaaaaattatcagtagttggtatgactgcgataatgtatatttacacacagtgtgtgttgcaaaaactaaaaagaaaatcattact
24344400
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AGI:
At5g60490.1
Description:
FLA12 (fasciclin-like arabinogalactan-protein 12). Identical to Fasciclin-like arabinogalactan protein 12 precursor (FLA12) [Arabidopsis Thaliana] (GB:Q8LEE9;GB:Q94EG7;GB:Q9FKJ8); similar to FLA11 (fasciclin-like arabinogalactan-protein 11) [Arabidopsis thaliana] (TAIR:AT5G03170.1); similar to unknown [Brassica rapa] (GB:ABB97042.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782)
Range:
from: 24342953
to: 24343928
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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