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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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               --------->ARR14(2)   --------->ANAC46
              <-------GAMYB        <---------At5g28300
              =====================MYC_MYB                                                   -------
             --------->MYB52(2)   <-----------GT1                                        --------->At4g35610
           <--------P    <---------TGA1a                                                 --------->DEAR3(2)
         <---------ANAC46--------->TGA1a                                                 <---------At4g35610
         --------->ALFIN1<---------ANAC58                                                --------->ATERF1(1)
      --------->ALFIN1----------->HVH21                                                 --------->MYB52(1)
      <---------DEAR3(1) <---------ANAC58                                              <-----------GT1
      <---------AtMYB61 --------->SPL7                                                 <---------WRKY38(1)
   <---------DEAR3(1) --------->LBD16                                                 --------->ATERF1(1)
<---------ARR14(2)    <---------SPL7<---------TOE2(3)                                 ----------->HVH21
--------->ARR14(2)   --------->DEAR3(1)                                              <-----------HVH21
----------->HVH21   <---------LBD16<---------LBD16       <---------ANAC46        <---------DEAR3(1)
------NtERF2<---------AtMYB61 --------->ICU4            <-----------------------TaNAC69(2)--------->DEAR3(1)
------->LBD16<------MYB46(1) <---------ARR11(3)        <---------DOF5.7(2)      --------->At4g35610
-------ANAC46<---------MYB46(3)<---------ICU4       <---------MYB46(3)          <---------LBD16
------>ETT(1)<------MYB83<---------O2        <---------------AGL15            <---------DEAR3(1)
------LBD16========================MYC_MYB  ----------------->AGL1<------ZmHOX2a(1)<------NtERF2
 
ccggagacggtggtgttggttacgccggacgtgatatttacggtattgccactggtggtaacgttgagaggaaaatgtccatcggcggagtcaccggcct  24343500
                                         <---------O2
                                         --------->ANAC58
                                         --------->O2
                                         ----------->GT1
                                         --------->ANAC58
                                         <---------ANAC55(2)
             <---------ANAC55(2)         --------->ANAC55(1)                                   <----
         <-------GAMYB            <------ZmHOX2a(1)     XXXXXXXXXXXXXXXXXXXXX>MIR848          ------
        ----------->GT1     ----------------------->TaNAC69(2)                                <-----
  --------->LBD16   <---------ANAC46     --------->ANAC46                                   --------
<---------LBD16    --------->ATHB12      --------->ANAC55(2) ------->TEIL                 <---------MYB46(3)
---->RAV1(2) --------->ANAC55(2)<---------TOE2(3)    ----------->HVH21         <-----------RAV1(1) -
 
gagtccggagagggttacttattgtttggaagtttgaggaagagacgtaacttggtatgacatgaaactgaataagctctacttgttgctcatcggttaa  24343600
         <---------LBD16                                                                       <----
      <-----------HVH21                                                                       <-----
-----TOE2(3)                             <---------DEAR3(1)                                   <-----
--->MYB52(1)              <---------WRKY12                                    --------->MYB52(2)
----DOF5.7(2) <----------DOF2    <------ZmHOX2a(1)              <-----------RAV1(1)           <-----
->DOF5.7(2)------>NtERF2 ----------->HVH21       --------->ARR14(2)  <------NtERF2          <-------
------>TEIL--------->LBD16<---------WRKY38(1)    <---------ARR14(2)--------->ETT(1)       <---------ZAT6
 
cgaatttagggtcccggctttgagaccggtgaacgaggaatcactcggtgcgaatatagtgattccattgtcggagttgtttagttggccgtagagttgg  24343700
                                                                                          <------NtERF2
                                                                                          --------->ATERF1(1)
                                                                                          <---------LBD16
                                                                                         ------>NtERF2
                                                                                        <---------PCF2
                                                                                        --------->TCP16(1)
                                                                                        <---------PCF5
                                                                                        --------->TCP15(1)
                                                                                        --------->TCP20
                                                                                       <---------TCP15(2)
                                                                                       <------NtERF2
                                                                                       --------->ATERF1(1)
                                                                                     --------->ALFIN1
                                                                                  ------>ZmHOX2a(1)<
                                                                                  <-----------RAV1(1)
                                                                              <---------PCF2 <------NtERF2
                                               --------->ZAT2            --------->MYB52(2) <------NtERF2
     --------->ZAT14               --------->At5g28300                   <---------MYB46(3)<--------
---GAMYB                 --------->At4g35610   --------->At4g35610       <-----------RAV1(1)--------
----MYB46(3)       <------ZmHOX2a(1)      <-----------GT1  --------->ARR11(3) --------->TCP15(1) <--
-MYB46(1)   <---------ARR14(2)    ----------->GT1<----------DOF2   <---------DOF5.7(2)<---------MYB46(3)
-MYB83      --------->ARR14(2)   <---------DEAR3(1)       <------ZmHOX2a(1) <---------MYB46(3) -----
-P   <---------ZAT14     <-------GAMYB   --------->WRKY38(1)   --------->MYB59<---------ARR14(2)----
 
ttagcgactccagtggatttgaggagtcggatgaagacggtgaattgaccagctttctctaggattttggtaacgtttgtgggtcctggtggggccggag  24343800
                                    <---------MYB46(3)
                                   <---------AtMYB61
                                   <---------ANAC46
                                 <---------MYB46(3)
                                --------->ALFIN1
                                <---------AtMYB61
                           --------->LBD16
                          --------->HSFB2a(2)
                          <---------ANAC58
                          <---------ANAC46             --------->At5g28300     --------->HSFC1(2)
                          <---------HSFB2a(2)        <---------DEAR3(1)        <---------KAN4(1)
 --------->At4g35610      <---------ANAC58          <---------ORA47(1)         <---------HSFB2a(1)
------>NtERF2             <---------LBD16       <------ZmHOX2a(1)              --------->HSFB2a(1)
---------DEAR3(1)        <---------LBD16      --------->ALFIN1                 --------->KAN4(1)
-DEAR3(1)             <---------ARR14(2)     <------ZmHOX2a(1)                 <---------HSFC1(2)
->LBD16               --------->ARR14(2)   --------->ALFIN1       <------ZmHOX2a(1) <---------AtLEC2
-------ATERF1(1)      <---------GLK1(1)   <------ZmHOX2a(1)    <------ZmHOX2a(1)--------->KAN4(2)
---->DEAR3(2)        <------ZmHOX2a(1)<---------ANAC46----------->GT1         <---------KAN4(2)
------->HVH21     --------->CCA1(2)--------->ALFIN1<------ZmHOX2a(1)   <---------YAB1
 
cgacggctggagagggctgagataggattccgggagtggtggtgaggaggaggaggacggtgaagaggaggatgatgagagaatgttccatggctctgtt  24343900
                                                                         <------MYB46(1)
                                                                         ----------->GT1
                                                                         <------MYB83
                                                                         <---------MYB46(3)      ---
                                                                       <---------WOX13(1)      <----
                           *TSS                                       <------------CBF       <------
                     <---------ANAC58                      <---------LBD16          <---------WRKY38(1)
                     <---------ANAC46                     --------->ALFIN1          <---------WRKY12
               <---------YAB1                      <------------CBF  --------->ATHB12   <---------ARR11(3)
    --------->ALFIN1 <---------ANAC58        ----------->GT1      <------------CBF --------->WRKY18(1)
 
ttcaagagtgttgatattttgtttgtgtgagtttatatgaagagtaaggggttatattgaactgggggaaattgattggttaagaggtcaacatatttta  24344000
                                                                 --------->ATHB12
                                                                 <---------ICU4
                                                                 -------->ATHB1
                                                                 --------->ATHB51
                                                         --------->ANAC46
                       --------->ICU4                    --------->ANAC58
                   --------->MYB46(3)                    --------->ANAC58
         <---------WOX13(1)    <---------AHL20(2)     -------->P--------->ICU4
        <---------ANAC58  <---------YAB1              ------>MYB83
        <---------ANAC58<---------ICU4                ------>MYB46(1)
        <------------CBF--------->YAB1         <---------DAG2   <---------YAB1
       --------->ATHB12<---------ATHB12       <---------ANAC58  --------->AHL20(1)
------>MYB46(3)    ------------>CBF  <---------ANAC55(2) --------->AtLEC2                          -
-------GT1----------->GT1 --------->ICU4      <---------ANAC58  <---------AHL20(2)             -----
---AHL20(2)      <-----------GT1<-----------GT1<----------DOF2  <---------ATHB51    <----------DOF2-
 
acaactaagttgattgttaataaccaatgatgattttatcacatgaattgctttacctacaggcaaaattattggatatatagaagcctttatgccattg  24344100
                                                     --------->MYB52(2)
                                                 <------MYB83
                                                 <---------MYB46(3)
                                                 <------MYB46(1)
                                               <--------P
                                              <---------ANAC58
                                              <---------ANAC46
                                              <---------ANAC58
                                              <-------GAMYB
                                             <------MYB46(1)
                                             --------->MYB52(2)
                                             --------->MYB55(2)
                         ---------->ID1      <------MYB83
            <------------MYB.PH3(1)          <---------MYB46(3)
        --------->At5g28300<----------DOF2   --------->ATHB12
  ---------->DOF2       <-----------GT1     <---------AtMYB61           <---------TOE2(3)
-------->ANAC58     <----------DOF2      <-----------RAV1(1)        <----------DOF2
---->YAB1<--------P <---------DAG2      <---------YAB1            ----------->GT1
-------->ANAC58  <-----------GT1     <---------AHL20(2)          <---------TOE2(3)        <---------
 
ataagcaaaggggtaactgtttacttttttcttttttggttttattgttggttggatagttgtattttgtggtttaatgtaatggttttagatttaccag  24344200
                     --------->ARR11(3)                   --------->WOX13(1)                       <
                     <---------ARR11(3)                  <---------AHL20(2)                      ---
                    <---------GLK1(1)                    --------->AHL20(2)                      <--
                    --------->GLK1(1)                --------->AHL20(2)  <------MYB83            ---
                  --------->YAB1                 ---------->DOF2         ----------->GT1        ----
               --------->YAB1          ----------->GT1  --------->ICU4   <------MYB46(1)        <---
              --------->ICU4        --------->DAG2 ----------->GT1     <--------P               <---
--GT1<---------AHL20(2)            ---------->DOF2--------->DAG2    >>>>>>>ZML2            <--------
 
ttatatatgtaaatgtaagaatgatatcttctcttaaaaaaagggaaactaataaagtaattaatcaggttctagttggtaacatttgaaatagagctaa  24344300
                                                                                              <-----
     ----------->GT1                                                                          <-----
--------->YAB1                                                                                <-----
---------YAB1               <------MYB46(1)                                                   <-----
------>YAB1                 <------MYB83                                                 --------->ATHB12
-------ICU4             <---------MYB46(3)                        <-------GAMYB          --------->YAB1
----->HAHB4             --------->MYB55(2)                       <-----------RAV1(1)     <---------ICU4
----->ICU4          --------->ZAT6                      --------->ANAC46                <---------ATHB12
------ATHB12       <---------YAB1           ----------->GT1      --------->ALFIN1 ----------->GT1
------ATHB51 --------->AHL20(2) <---------YAB1 ------->TEIL  --------->ALFIN1   ---------->DOF2
-At4g35610   <---------AHL20(2) ----------->HVH21   <-----------GT1 ----------->GT1     --------->ICU4
 
taatgaaaatgtataaaaaattatcagtagttggtatgactgcgataatgtatatttacacacagtgtgtgttgcaaaaactaaaaagaaaatcattact  24344400
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AGI:  At5g60490.1   
Description:  FLA12 (fasciclin-like arabinogalactan-protein 12). Identical to Fasciclin-like arabinogalactan protein 12 precursor (FLA12) [Arabidopsis Thaliana] (GB:Q8LEE9;GB:Q94EG7;GB:Q9FKJ8); similar to FLA11 (fasciclin-like arabinogalactan-protein 11) [Arabidopsis thaliana] (TAIR:AT5G03170.1); similar to unknown [Brassica rapa] (GB:ABB97042.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782)
Range:  from: 24342953    to: 24343928    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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