Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -----------GT1 --------YAB1                            <---------ANAC58 ------ICU4                              <---------ANAC58 ---->ICU4                 <----------DOF2         --------->ALFIN1 -----YAB1                <------------------------ANAC81                                   --------- --ARR11(3)   <----------DOF2            <---------ANAC46                       <---------AHL20(2)   tattactagttttcttctttcatttctctctttctgtcttcttgcttgtttaagtggagaactctaagacaaactaaactatttttttttttttgtctct  24337800                      <---------ICU4                     <---------YAB1    --------->RAP2.6(3)                     --------->bZIP60(2)                  --------->ICU4      <---------WRKY18(1)                      --------->ANAC46   ---             --------->ANAC58      <---------ICU4                           <---------ZAT18       ---             --------->ANAC58     --------->ICU4                    <---------WRKY18(1)         -----           --------->YAB1    --------->ANAC46                      ----------->HVH21          ------>ZmHOX2a(1) ->ID1   ------->TEIL--------->ICU4--------->YAB1          <----------DOF2  --------->ZAT18 <--------   tcttacatatgaatcaagacatgatgattccacataatcatgaccgcctctcattctctagctttgtccatgaccaagagcacatcacccctaatcctta  24337900                                                           <---------ARR14(2)                                                          <---------GLK1(1)                                                          --------->GLK1(1)                                                        <------ZmHOX2a(1)                ------>NtERF2                          --------->ANAC46             --------->At4g35610                     <---------LBD16             --------->ZAT2    --------->ANAC46      <---------HSFB2a(2)      --------->AHL20(2)             <---------At4g35610                     --------->HSFB2a(2)  <-----------TBP   --------->ZAT6 --------->RAP2.6(2)  ---------->DOF2--------->LBD16<-------MYC2 ------>TOE2(3) <---------At4g35610--------->ANAC58------>MYB46(1)   ------->MYC2  <---------AHL20(2) ------>TOE1(3) <---------ATERF1(1)--------->ANAC58------>MYB83--------->LBD16<---------AHL20(2) --->P       <---------ZAT2    --------->ANAC58 --------->HSFB2a(1)  <-------MYC3 --------->AHL20(2) -ICU4    ----------->RAV1(2)  --------->ANAC58 <---------HSFB2a(1)  ------->MYC3 <---------AHL20(2)   ccctaactctcagcctgcagcctccactaaaacacccaagaaaaagagaaaccttccaggaaatccaggcatgtgtatatataattttatatgttctcca  24338000                                                                    <----------DOF2                                                                    ------>ZmHOX2a(1)                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------GLK1(2)                                                                --------->ARR14(2)                                                       --------------->AGL15                   <---------ANAC58           --------->GLK1(2) <---------ARR14(2)       <---------ANAC58             --------->ARR11(3)              --------->YAB1     <---------ARR11(3)       <---------ANAC58         ---------->DOF2                    <---------ATHB12    --------->ARR11(3)    <----------DOF2      --------->YAB1                    ------------>CBF      ----------->ARR10    <-----------GT1   <----------DOF2 <---------ANAC58--------->YAB1     ----------------->AGL3   <----------DOF2   tgggtctttaataaagctctagcttgatgtgttttcatcaaaatcaataatctttttccaagtatagatcctttgtgttttcttttttctttcttgatac  24338100         <------------CBF                            ----------------->AGL2        --------->ATHB12                            <------ZmHOX2a(2)       <---------AHL20(2)                          --------->AGP1       <---------YAB1                              <---------ARR14(2)                             <--      <---------AHL20(2)                           --------->ARR14(2)--------->At4g35610         ----    <---------YAB1                            --------->MYB52(1)     <---------CCA1(2)          <---- <---------AHL20(2)                    ----------->RAV1(1)           <---------At4g35610        <----   tgttttatttttattggttctaattttgtttctaacaacaacaacaaaaaacagatccaaatgcagaagtcatctctctatctccaaaatccctcatggc  24338200                                                                 ---------->DOF2                                                               --------->ANAC46           <---------ZAT2                                                         --------->At4g35610              <---------At4g35610                                                         <---------ZAT2                   --------->At4g35610                                                         <---------At4g35610         --------->AtLEC2                                                         --------->ZAT2          ------>MYB46(1)                                                     <-----------HVH21           ------>MYB83                                                    --------->TOE1(3)         ----------->RAV1(2) ----NtERF2                                        <---------HSFC1(2)      <---------ALFIN1 -->NtERF2                                         <---------HSFB2a(1)     --------->MYB46(3)   ----- -----ETT(2)          ----------->GT1              --------->HSFC1(2)    --------->RAP2.6(2)    <---- ------ID1<----------DOF2                        <---------GLK1(2)      --------->ZAT18   --------->ZAT2   gacaaatcggttcttttgtgaaatttgtaacaaggggtttcagagagaacagaaccttcagctccacaaaagaggccacaacctgccatggaagctgaag  24338300                                                                        --------->At4g35610                                                                     ------>ZmHOX2a(2)                                                                 <---------YAB1                                                               --------->YAB1                                                               <---------ICU4             <---------MYB59                        >>>>>>>>>TBF1                         <---------ATHB12       <------ZmHOX2a(1)                 --------->At4g35610                        --------->WOX13(1)    <---------STY1(1)             --------->GLK1(2)   --------->AHL20(2)     <---------ANAC58<---------ZAT2  --------->ARR11(3)            --------->YAB1   ----------->GT1            <---------ANAC58<---------At4g35610    ------ ---->At4g35610  <---------At4g35610                    <---------ANAC46--------->ZAT2  <---------ARR11(3) -----At4g35610<-----------RAV1(2)               ----------->ARR10   =======================HOX2a_HOX2a   cagaaaacgaacaagaatcaggtgaagaagaaagtttatatatgccctgagaagagttgcgtccatcatgatccagctcgagccctaggagaccttactg  24338400                                                                                         <---------At4g35610                   <------ZmHOX2a(1)                                        --------->ARR14(2)           <----------DOF2                         --------->ANAC55(2)      <---------ARR14(2)           <---------DAG2                 <---------GLK1(1)                --------->GLK1(1) ---------->DOF2  --------->ANAC58       <---------ARR14(2)                <---------GLK1(1) --->HSFB2a(2)    --------->ANAC58       --------->ARR14(2)           ----------->GT1 ---------->DOF2   gaataaagaagcactttagcaggaaacatggagagaagaagtggaaatgcgataagtgttccaagaagtatgctgtgatatccgattggaaagctcataa  24338500                                                                                             <-------                                                  --------->bZIP60(2)                     <---------TOE2(3)                                                  --------->ANAC46                 ----------->RAV1(1)           --------->At4g35610                   --------->LBD16                 <---------ZAT14           <---------At4g35610                  <-----------RAV1(2)              <---------At4g35610  --------->CCA1(2)              --------------->AtSPL8                          --------->At4g35610 <---------ARR14(2)              <---------------AtSPL8                       ----------->RAV1(2) --- <---------ARR11(3)              --------------->AtSPL3--------->ICU4         =================RAV--- --------->ARR14(2)        <---------YAB1<----------DOF2<---------ICU4--------->ANAC46<----------DOF2   caagatttgtggtagcagagagtttagatgtgattgtggtactcttttctccaggtcattactactctttctacgtcttcgtctgcagcattatcgtttg  24338600                                                                            --------->AHL20(2)                                                                 <---------TOE1(3)                                                                <-----------RAV1(2)                                          ------->GAMYB    <---------ARR11(3)                       <        <-------TEIL                      ----------->GT1  --------->ARR11(3)                       - --MYB52(1)                            --------->MYB52(1)  --------->ARR14(2)                   ----- ------>TOE1(3)                       --------->MYB46(3)   <---------ARR14(2)        --------->ALFIN1 ------>TOE2(3)                  ----------->GT1          <---------CCA1(2) <---------AHL20(2)-------   ccttaacatgttcatatatcaaacatttttaaaaattgtaacaacggaaaaaacgttttcaaatcttcaggtttgcatttatttgaagtgtttgataaaa  24338700  Previous    Next  AGI:  At5g60470.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G45260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21823.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 24338196    to: 24340016    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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