Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------HSFB2a(2)                          <-----------RAV1(2)                    <---------At4g35610                    --------->At4g35610               --------->ANAC46               --------->ANAC58               --------->ANAC58                                                                   ---             ---------->DOF2                                                                    <----            <---------WRKY45                     ---------->DOF2                           <------ZmHOX2a(1)            <---------WRKY12                  ------>NtERF2                              <---------TOE1(3) ------GT1  <---------WRKY38(1)      <---------YAB1             ----------->RAV1(1)      <---------TOE2(3) --WOX13(1)--------->WRKY18(1)       <-----------GT1   ---------->DOF2         <---------YAB1--------   cttcatggttatggtcaaagccagaagcccagaagcattatacttctctgccaaagacaaagaagacaacagtactacatgatgctcgtttaaggatata  24318500                        ------>NtERF2                       --------->LBD16                      <---------ANAC58                      <---------ANAC58                      <---------ANAC46                     <---------LBD16                  <---------ANAC58           --------->TOE2(3)                   <---------MYB52(1) --------->ZAT14  ----------->GT1 <---------ANAC58            <-------GAMYB       --------->ZAT18 ------>MYB46(3) <---------ICU4           ------>ZmHOX2a(1)       <---------ZAT18 -------GT1--------->TOE1(3)              <----------DOF2--------->LBD16<-------GAMYB              <- ->CCA1(2)--------->At4g35610          <---------ATHB12  ------>ZmHOX2a(1)       <---------YAB1    <-   acaactgttataagcttaatccttgcggacaatccaatccaatcctttcgttgttcatcctggacaagtgtgctcgttgtattctgtttatgtgcaaaat  24318600             --------->ALFIN1           <---------ANAC58           <---------ANAC58           <---------ANAC46      <---------ANAC46      <---------ANAC58      <---------ANAC58      --------->MYB52(2)                             <---------YAB1                    ----------->GT1     <-------TEIL                <---------ATHB12   <---------TOE2(3)                ---------->DOF2  <---------MYB46(3)         <xxxxxxxxxxxxxxxxsmallRNA(i)                          ------->GAMYB --------->ALFIN1           --------->ANAC58 <------MYB46(1)                    --------->MYB52(1) --------bZIP60(2)          --------->ANAC58 <------MYB83                       ----------->RAV1(1)-- --------ANAC46             <xxxxxxxxxxxxxxxxsmallRNA(i)                    <---------PCF2         <-   gatgtggttcgtggtgtgttagaccaagtccagcaatggtttttagtgggtttttatgttagatttctaagtaaaatgggcccaacagaaagaaaaacag  24318700                                                                    <---------------AGL15                                                                    --------------->AGL15                                                                    <---------DAG2                                                                    <----------DOF2                                                              <---------ANAC58                    <---------------AGL15                     <---------ANAC58                    ------>ZmHOX2a(1)                    <---------O2  <------------CBF                    --------------->AGL15                <---------TGA1a                   <-----------------AGL2                --------->ANAC55(2)                   =================================================================MADS_MADS              --------->HSFB2a(1)                        --------->TGA1a              <---------ANAC58                           ======================bZIP_DOF              <---------HSFB2a(1)      ------>NtERF2     <---------ANAC55(2)   ---------->DOF2              <---------ANAC58      <---------HSFB2a(2)  <---------ANAC58  ----------->GT1           <------ZmHOX2a(1)        --------->HSFB2a(2)  --------->O2 --------->ATHB12 ------->KAN4(1)   ----------------->AGL3                <---------ANAC58  <---------ANAC46 --------KAN4(1)   <-----------------AGL3                ======================bZIP_DOF          <---   aacaatccatttaggagcgttcctaaaattgggtttttcgcgacccaatagaaacccatacgtggcttcactttattgggtaaaagttttgactcaaaaa  24318800                                                        <------------CBF                          ---                                           ----------->RAV1(1)                                    <--                                          ----------->HVH21                                       ---                                          <---------ETT(1) *TSS ----------->GT1        --------->ATHB12                 <<<<<<<<<TBF1     <---------ANAC46  ------------>CBF                 <---------YAB1- -------ID1 <---------GLK1(2)<---------CCA1(2)     <-----------------AGL1          <----------DOF2<--   aaacaaaaaaaacacattcttcttccttctcatttcttcgtgttccgacagagactccaattggaatcgaaaaacaaactcggttcttttgatttggaga  24318900                         --------->YAB1                        ================================HOX2a_HOX2a                        ==========================HOX2a_HOX2a                     --------->DEAR3(1)                   <---------At4g35610            <---------ARR14(2)            --------->ARR14(2)  <---------LBD16               <---------MYB46(3)           <---------GLK1(2)   --------->YAB1                <---------DEAR3(1)         --------->LBD16<------ZmHOX2a(2)                    <---------AtMYB61        --------->HSFB2a(2)   <---------ATHB12               --------->ALFIN1 ------>HSFC1(2)------>ZmHOX2a(1)                ------>ZmHOX2a(1) -------HSFB2a(1)  ------>NtERF2<---------At5g28300 <---------YAB1  <---------MYB46(3)              - ------>HSFB2a(1)  --------->LBD16     --------->ARR14(2)  --------->LBD16                     ------ -------->GLK1(2) --------->DEAR3(1)   <---------ARR14(2)<---------LBD16                      ------- -------HSFC1(2)===============HOX2a_HOX2a ------>ZmHOX2a(1)<---------MYB52(1)                -------   agtttctgttcccgattcctccgccgatcacaatcacggcgagtcctcatccttctgattccggtggtgatggttcgaactcgaagtcttcttccgacga  24319000                    <-----------------AGL1                <---------HSFB2a(1)                <---------HSFC1(2)         <---------ANAC58                                                 --------------->AtSPL8         <---------ANAC58                                                 <---------------AtSPL8         <---------ANAC46                       <--------P            --------->ICU4 --------->YAB1     <---------MYB52(1)                      --------->HSFB2a(2)    --------------->AGL15     -------   <---------MYB46(3)<---------ALFIN1        <---------HSFB2a(2)    <---------------AGL15     ------- ----------->MYB.PH3(2)       <---------ANAC58 <---------MYB52(1)  <-----------------AGL3     ------- >NtERF2<---------ZAT2        <---------ANAC58--------->LBD16------>ZmHOX2a(2)       --------->TOE2(3) ---->HVH21     --------->HSFB2a(1)         <---------LBD16--------->ARR11(3)  <---------ANAC55(2) -->DEAR3(1)    --------->HSFC1(2)      <<<<<<<<<TBF1      <---------ARR11(3)  --------->ANAC55(2)   cgagtttgttagcttggactcttccacttctggcttctgttcttcttccggtaagttttttgatcttatgcaatttttggtacttaatcttatttcaaga  24319100                                <---------ARR14(2)                           --------->ARR14(2)                                --------->ARR14(2)                           <---------ARR14(2)                      --------->ATHB12                                     <------MYB46(1)         <---------YAB1    ----------->GT1                                 <------MYB83    <---------At4g35610   ----------->GT1                                 --------->MYB59          <-    --------->At4g35610 <---------WOX13(1)          ----------->GT1       --------->MYB111(1)     <-- -->ANAC58          <---------WOX13(1)     <---------REM1(1)              --------->MYB46(2)     ---- -->ANAC46        --------->ATHB12   <---------AtLEC2                   <---------MYB52(1)     <----- -->ANAC58 <---------GLK1(2)  ----------->ARR10 <------ZmHOX2a(1)     <---------MYB46(3)       ------   aattgaagctcaagattgtttgattgattgggaaaatttgcataaatgtaggattggataaatttgtaagtgttgttaggttctgcattttgcaatagat  24319200                                                                          <-------GAMYB                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                      <---------MYB52(1)                                                                   ------>ZmHOX2a(2)                                                                   <-------TEIL                                                                  <------ZmHOX2a(2)                                                                 --------->AGP1         --------->GLK1(2)        <---------AtMYB61              <---------ARR14(2)   <---------WOX13(1)  --------->TOE2(3)                         <---------GLK1(2) <---------MYB46(3)   --------->ATHB12                           --------->ARR14(2) --------->ATHB12     --------->YAB1                            --------->At4g35610 --------MYB52(1)     <---------ICU4                           ----------->ARR10 -----GAMYB ----------->GT1     <---------bZIP60(2)          <------ZmHOX2a(2) -->ZmHOX2a(2)       <---------ATHB12                       <---------ARR11(3)        <-------TEIL ----ARR11(3)        --------->ICU4                         --------->ARR11(3)  ---------->DOF2 --->ARR11(3)----------->GT1    <---------ANAC46        ---------->DOF2  <---------ANAC58   ---------   cgttgattgagaagctgttaaaaatcattagatgatgtggtcttcaagttttttttgaaaaagatcagatccgtttcgttgaaaaagatgcaaaattctg  24319300                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                           <---------ANAC55(2)                     <-------TEIL                                                          --------->ANAC46                  <---------At4g35610                                                      --------->ANAC55(2)                  --------->At4g35610                                                      --------->ANAC58                --------->ZAT18                                                            --------->ANAC55(1)           <---------ANAC58                                        --------->ETT(2)        --------->ANAC58 <-------GAMYB  <---------ZAT18          <---------GLK1(2)  ---------->DOF2             <---------ATHB12 >GLK1(2)  <---------ANAC58            <---------YAB1   --------->TOE2(3)             --------->WOX13(1)   ttcagttgtatgtgcgagtgagcttcatttttaaaaagtttttgattctctctagttaacttaaaagtatcgacatgggttattgattcaatcacgtaat  24319400  Previous    Next  AGI:  At5g60430.1    Description:  antiporter/ drug transporter. similar to antiporter/ drug transporter [Arabidopsis thaliana] (TAIR:AT2G16650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46918.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 24318859    to: 24320294    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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