Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->SPL7 -------->ANAC58 -------->ANAC58 ------->SPL7                                                                               <-------- ----->ZAT18                                               <---------LBD16            --------->GLK1(2) ------ZAT18                                             ----------->HVH21           <---------GLK1(2) -----ANAC58                                             --------->WRKY12            <---------ARR14(2) ---->ANAC55(2)                                        <----------DOF2       --------->ANAC58 -----ANAC58                                          ------>ZmHOX2a(2)    <--------P--------->ARR14(2) -----ANAC46              ------>MYB83              --------->ARR11(3)  <---------TOE1(2)   <-------- --------->AtSPL8         ------>MYB46(1)  ------>ZmHOX2a(1)           <-----------RAV1(2)  <-------- --------->AtSPL3      --------->MYB46(3)  ==================HOX2a_HOX2a<---------TOE2(2)<-----------RAV1(1) -ANAC58              ------->TEIL       ----------->RAV1(2)<---------ANAC46 --------->ANAC58 -ANAC58           --------->ANAC46  ------->TEIL   <---------ARR11(3) ==============================RAV   gtactccatacgataagttctacgaaccaatctcacatgaaactcctgcaagtcgatctttgacgggaaattctcaggtaagaaacagattctgtcgttt  24206600                                                                           --------->At4g35610                                                                     ---------->DOF2                                                                 --------->ARR14(2)      --------->CCA1(2)   --------->LBD16                    --------->HSFB2a(2)      <------ZmHOX2a(2)  <---------LBD16                     <---------LBD16     --------->AGP1<----------TaMYB80                     --------->ARR11(3) -ANAC58         --------->YAB1                           <---------ARR11(3) <----------DOF2     <--- -ANAC58       --------->ANAC58                <-----------GT1   <---------ARR14(2)             <---- -ANAC46       --------->ANAC58             --------->TOE1(3)<---------HSFB2a(2)                <----   gagaatagatccaagactcgcataatccctggagttgtctcttgaagcttaaccagacaagttctcggattcaaaggagcttcaagtttatagacattgc  24206700                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                  ----------->ARR10                                      >>>>>>>>>>WRKY38                                      >>>>>>>>>>WRKY26          <---------ZAT14             >>>>>>>>>>WRKY43                              <-----------RAV1(1) -------DOF2                       --------->At4g35610  <----------DOF2       <---------MYB46(3) -----ANAC58                  >>>>>>>>>TBF1  --------->DAG2                  <---------MYB52(1) -----ANAC58           <------ZmHOX2a(1)    ---------->DOF2             --------->MYB52(1)      <----   tttgtttcagagtgaagaaaccagaggatgaagaagaagatgaccaaaaaggaagatactttgggaatttagacaaacggttgtttttgttggagagagg  24206800            --------->TGA1a            <---------TGA1a                                                        <------ZmHOX2a(2)            <---------O2                                                     ------>ZmHOX2a(2)  -----            --------->O2                                                    <------ZmHOX2a(2)   <----        ------>NtERF2                                              --------->WRKY18(1)--------->At4g35610       --------->ANAC58                                       <---------ANAC58    --------->ARR11(3)       --------->ANAC58                                <---------At4g35610 --------->ARR14(2)<-------       --------->ANAC46                  --------->At4g35610  <---------ANAC46    <---------ARR11(3)-     --------->CCA1(2)<-------TEIL     <------ZmHOX2a(1)      <---------ANAC58   --------->GLK1(1)>>> --ZmHOX2a(1) --------->ALFIN1 ----------->HVH21       --------->At4g35610 <---------ARR14(2)--------   aagagagagacgccaagtggcacatacagagcggagacagaggagatgaatggtgtctgatgagtcgtggtcaagacgatcggagatcaactcaagaata  24206900                                                                     --------->GLK1(2)         <------ZmHOX2a(2)                                          --------->ARR14(2)        --------->ARR11(3)                                          <---------ARR14(2) ---->ARR11(3)                                             --------->DAG2 -----ARR11(3)                                       <----------ID1 <---------GLK1(2) --GLK1(2)                                         --------->At4g35610                    <------ZmHOX2a(1) --------->DOF2                               --------->AtLEC2--------->ALFIN1            =========== >>>>>>RAP2.2                            --------->GLK1(2)---------->DOF2               <---------TOE2(3) ->YAB1 <---------ARR11(3)           >>>>>>>>>TBF1 <---------At4g35610            <---------TOE1(2) <   tctaaaggaagatcagaccattgagaaggaagaagagaagaagaatccatggaagatgacaaaagtgagggattctgttcttcttgggtttaggaatttt  24207000                                                                         --------->AHL20(1)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)         --------------->AtSPL8                                         --------->AHL20(2)        <---------ANAC46                                                <---------AHL20(2)      ------->TEIL   --------->AHL20(2)              <----------DOF2   <---------AHL20(1)   --------->ANAC55(2)      --------->ETT(2)<---------YAB1            --------->YAB1         <-------   <---------ANAC55(2)      <---------ETT(2)--------->ICU4          --------->AHL20(2)     --------->LBD16   ----------->GT1   ----------->TBP     <---------MYB52(1)     <---------At4g35610      --------->LBD16 ======HOX2a_HOX2a   <---------AHL20(2)  --------->ICU4  <---------TOE2(3)               <---------LBD16 ------ZmHOX2a(2)<-----------TBP  <---------ICU4<-------TEIL    --------->At4g35610    <---------LBD16   ggatcatgtaacttgtactatatataaatgtctacataatgtcgttatgattcatctttgatgttgagcttaaaataatttggaagttatccgcggataa  24207100                                  ------------>CBF                              --------------->AGL15                           <---------ANAC58                                    ----------------->AGL3                <------------CBF ------>NtERF2                                 ----------------->AGL2              <---------YAB1    --------->ANAC58                               <-----------------AGL2            <---------bZIP60(1) --------->ANAC46                  <---------YAB1<---------------AGL15         <---------YAB1    <---------ANAC58                     <---------AHL20(2)   --------->AHL20(2)  <------------CBF                         --------->AHL20(2)----------->TBP <-- <------------CBF   <---------ANAC46                       <-------TEIL        <-----------------AGL3 --ARR14(2) --------->bZIP60(1) --------->ANAC58     <------------CBF        <-----------GT1  <------   gaaaattgaatatgatatcattgtgtattgctagacgccaatatttcatatatcaaattgatacatttattttagtatattactatatatggttgtcttt  24207200                                                                                      <---------YAB1                                                                                    ----------->GT1                                                                                <---------AHL20(2)                                                                                <---------AHL20(1)                                                                                --------->AHL20(1)                                                                           --------->ARR11(3)                                                                           --------->AHL20(2)                                                                           --------->AHL20(1)            <---------ANAC58                                               <---------AHL20(1)            <---------ANAC58           <---------ZAT6                      <---------ARR11(3)       <-----------RAV1(1)<-----------GT1 <--------P                      --------->CCA1(2) <---------ANAC46        <---------AHL20(2)             <---------DAG2   <---------ARR11(3) -------TOE2(3)          --------->AHL20(2)--------->MYB111(1)           --------->ARR11(3)     <---- ----DOF2   <---------AtLEC2    --------->AHL20(1)      <----------DOF2<---------TOE2(3)   <---------   gtggtttatatgttgcatgatgtctatttaaacatatattagtggtaagtagaccatgctttttgcaaatgttaagatatattatattgttatttacaac  24207300                                               --------------->AGL15                                               <---------------AGL15                                              <-----------------AGL2                                              ----------------->AGL2                                              ----------------->AGL3                                              <---------ATHB12                                             -------->P               <---------AHL20(1)            ------>MYB83               --------->AHL20(1)            ------>MYB46(1)                                      <--               --------->ARR11(3)       <---------WRKY18(1)                                       <--     --------->MYB46(3)                --------->WRKY12                                           <--    ------>MYB83           <---------YAB1  --------->MYB46(3)                       <---------ARR11(3)    ------>MYB46(1)  <---------YAB1    --------->WRKY38(1)                          --------->ARR11(3)   --------->ANAC46----------->GT1------->TEIL<-----------------AGL3               <---------GLK1(1) -----ICU4  --------->AHL20(2)--------------->AtSPL8  ----------->GT1              <---------CCA1(2)< --GT1----------->RAV1(1) <-----------GT1  --------->AtMYB61             ------->TEIL --------->TOE2(3)   attaccaacaacaaaaaaatattgttattttcaatgtaccattgaccaaccatatatagtaatatactaaaaatgtatcaatttgatatcttaaatattg  24207400                                                           --------->AHL20(1)                                            --------->At4g35610                                            <---------At4g35610         --------->ZAT6             --          --------->ANAC46               --------->LBD16  <---------AHL20(2)                    -----   --------->ANAC58                      <---------At4g35610  <---------AHL20(2)               <-----   --------->ANAC58        <---------AHL20(2)             --------->AHL20(2)                 -------- -------ANAC58       --------->YAB1      --------->At4g35610<---------YAB1                   <------- -------ANAC58    --------->bZIP60(1)   --------->ANAC46 <---------AHL20(2)                  <------- -------ANAC46    <---------bZIP60(1)  <---------LBD16   <---------AHL20(1)    --------->AHL20(2) <-- ------NtERF2   --------->YAB1       --------->ARR14(2)  --------->AHL20(2)    <---------AHL20(2)----   gcgtctagcaatacacaatgatatcatattcaattttcttatccgcagataacatccaaattattttaagttcaacactaatttaaaacgttgcatcatt  24207500  Previous    Next  AGI:  At5g60060.1    Description:  F-box family protein. Identical to Putative F-box protein At5g60060 [Arabidopsis Thaliana] (GB:Q9LVG8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G17030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40656.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 24205826    to: 24206950    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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