Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <----------DOF2     ----------->GT1                                                                    ------>ZmHOX2a(2)    --------->ICU4                                                                     <------ZmHOX2a(2) ------->ANAC46                                                                       --------->ARR11(3) ------->ANAC58                                                                       <---------ARR11(3) ------->ANAC55(2)                                                                   ------->GAMYB ------->ANAC58                          <------ZmHOX2a(2)                        --------->MYB52(1) --------ANAC55(2)                     --------->GLK1(1)                       --------->ANAC58 ------->ANAC55(1)                <---------ZAT14                       --------->ARR14(2) ----->RAV1(1)                    --------->ZAT14             <-----------GT1  --------->ANAC58 >ANAC46                  <---------ARR11(3)               --------->ARR14(2)  --------->ANAC46 >RAV1(2)                 --------->ARR11(3)            --------->YAB1  <---------ARR14(2)       <---   caagtaattgtgaaaacacattgctaaacatctcagaacagagatcgagagcatgtaatcaaatttgccagacgaatacacacacaacgatctttagcaa  24126100                                                                                 --------->LBD16                                                                                --------->ANAC55(2)                                                                                <---------ANAC55(2)                                                                               ------>ZmHOX2a(2)                                                                               <---------------------                                                                              <------ZmHOX2a(2)                                                                       <---------ANAC58           ---            --------->ETT(2)                                           <---------ANAC58          ----       --------->ATHB12                    <---------MYB52(1)          <---------ANAC46         <----     <---------WOX13(1)                  ----------->GT1<---------AHL20(2)   --------->ARR14(2) ----- ------ATHB12                          <-------TEIL    --------->AHL20(2)    <---------ARR14(2) -----   tgaccagattgatttcgacagagtaattgaaaatgaatagattcagttaattcaaaattttatcgattgtatcgcttgggatccgtaagagagaagacga  24126200                                                                    --------->MYB46(3)                                                                  --------->RAP2.3(3)                                                                 --------->ATERF1(1)                                                                --------->At4g35610   <------ZmHOX2a(1)                                                                <---------At4g35610   ===============   <-----------HVH21                                        --------->ALFIN1        <---------TOE2(3) --TaNAC69(2)                                              <-------PIF5    <---------ARR11(1) ------>MYB46(3)                                           ------->PIF5    --------->GLK1(2) --->TEIL                            <---------YAB1       --------->At4g35610 --------------->AGL15 -----ARR14(2)                     <---------ICU4         --------->ZAT2  <---------ARR14(1) ---->ARR14(2)                     --------->YAB1       <-----------RAV1(2)------->TEIL  ------------ ---->MYB52(1)                    <---------YAB1  --------->ZAT6--------->ZAT2<---------------AGL15   accgctatcaccgatgagaagaagcttaatgagataatcataatcggctctagctctagcaggtggagcagccatcgaatctaaatgaggaaaacaaaca  24126300                                                                                                   --                                                                                                 <---                                                        ----------->GT1                         -----                                                       <------ZmHOX2a(2)                        -----                             <----------DOF2      ------->GAMYB                               <------                            <---------ANAC58   ----------->RAV1(1)                           <-------                       ------>MYB46(1)--------->At4g35610                                    <-------             <------ZmHOX2a(2)        =====================RAV                               <-------            <---------ARR11(3)        ----------->RAV1(2)                --------->MYB52(1)  --------           --------->GLK1(1)<---------ANAC58   --------->MYB52(1)        ---------->DOF2    --------- ===================HOX2a_HOX2a   <-----------HVH21  --------->GLK1(1) --------->TOE2(3)    <-------- ------------>ANAC81   ------>MYB83   <---------At4g35610            ------->TEIL  --------->At4g35610   aacaaaaactcagagatcaaaaaccaaattgctttgtgtcatctgaagacaacagagatcgaaaattgaagaacctaaaggaatcagcgaagaatgcgta  24126400                                                                                                    -                                                                                                   <-                                                                                                  ---  =========================HOX2a_HOX2a                                                            ---  <------ZmHOX2a(2)                                                                               --- ------->LBD16                                                                                   ---- ------LBD16                                                                                     <--- ---->SPL7                                                                                       <--- ---->MYB52(1)                                                                                  ----- ---SPL7                                       <-------GAMYB                                    <---- --ANAC58                                     <---------MYB46(3)                               <----- --ANAC55(2)                                  <------MYB46(1)                                  <----- --ANAC58                                     <------MYB83                   *TSS              <----- ->ANAC55(2)                                <--------P                 --------->CCA1(2)       <----- ------>AtSPL3                        <---------ARR11(3)     --------->At4g35610              <------ -------AtSPL3      <------ZmHOX2a(1) --------->ARR11(3)     <---------At4g35610              <------   ccggatcaaaatgatgcagagaggagaagagaagagaagagaccttgttggttatagtaaatgagcagagaagaaacgagagagagcgatggaaatggcg  24126500       <---------ARR14(2)       --------->ARR14(2)     ----------->ARR10 ----------->GT1 ---------->GT1 --------DEAR3(1) ------>SPL7 ------>ATERF1(1) ------>RAP2.6(3) -->NtERF2                                                    <-----------GT1 ---NtERF2--------->ANAC58                                <---------ARR11(3) ------ATERF1(1)                                        --------->ANAC58 ------>HVH21                                           --------->ANAC58 -----SPL7--------->ANAC46                              --------->ANAC46                       <----- ----ANAC58                                          <---------ZAT18                           ------ ----ANAC46                                          --------->ZAT18                   --------->YAB1 ----RAP2.6(2)           <-----------GT1          <---------ANAC58                    <------ZmHOX2a(2) ----ANAC58        --------->ICU4                 <---------ANAC58                    <---------YAB1 ---------AtSPL3   ------>ZmHOX2a(1)              <---------ANAC46                   <---------ARR11(3) ---LBD16 --------->ANAC58        ----------->RAV1(2)<---------ZAT14                 --------->ARR11(3)   gacggctaaaatacgccagtcctgatttaacttctcttctggcctcttcttcgcgtgcacgatattacctccagcgtaagttagcaagatcatagtccga  24126600                                                                                 --------->WOX13(1)                                                                       --------->ANAC58                                                              <---------YAB1   <---------AHL20(2)                                                         <----------DOF2       --------->AHL20(2)                                                ------>ZmHOX2a(1)  --------->ANAC58                 -     ---------->DOF2                <----------DOF2     <---------DAG2 ----------->GT1              -  <---------HSFB2a(2)        <----------DOF2   <---------ANAC58    --------->ANAC58  --------->WOX13(1) ----At4g35610       --------->ATHB12          <---------ANAC58 --------->ARR14(2) <---------ATHB12-- --->At4g35610    <----------DOF2   --------->TOE2(3) <---------PCF2   --------->ANAC58            ==   tggcccagaaagaatgaagccttttattggcctttcttctttaatgagtccttgtgggccttttctgatacgctcgtaaatataaatcaatcttatggac  24126700                 <---------SPL7              ------->MYC3              ------->MYC4              ------->PIF5              <-------MYC2              <-------MYC4              <-------MYC3              ------->MYC2              <-------PIF5             <---------O2                    ---------->DOF2             <---------TGA1a         --------->LBD16             --------->ANAC55(2)    <---------ANAC46             <---------ANAC55(2)    --------->ANAC58             --------->TGA1a        <---------ANAC55(2)             ===========================================bZIP_DOF             <---------ARR14(2) --------------->AGL15              <---------HSFB2a(2)                      --------->ARR14(2) ---------------->AGL2              --------->ANAC58                  ---------->DOF2   <---------AHL20(2) ---------------->AGL3             <---------LBD16                 --------->ANAC58    --------->AHL20(2) ------>P    --------->O2        --------->ARR14(2)                --------->ANAC58    <---------AHL20(2) ======================MYC_MYB   <---------ARR14(2)            <-----------HVH21 ----------->GT1   taaccagaaatagacacgtggtatggatagttatagttccgcaaaatgaaagtcaaaaactcaaatgtcacacaaagcatatatggaaaataaatggcaa  24126800                                                       <--------ATHB1                                                       --------->YAB1                                                       --------->ATHB12                                                       <---------ICU4                                                      <---------YAB1                                                      --------->ICU4                                                      <---------ATHB12                                                    --------->YAB1         <---------At4g35610                                              --------->ANAC58        --------->YAB1                                              --------->ANAC58     --------->YAB1                                              --------->ANAC46  <<<<<<<ZML2--------->At4g35610                        --------->ANAC46   --------->ARR14(2)--------->HSFC1(1)                        --------->ANAC58   <---------ARR14(2)<---------HSFB2a(2)             <-------TEIL             ----------->RAV1(1)    --------->HSFB2a(2)            <-----------GT1     <----------DOF2  ----------->RAV1(1) <---------YAB1 --------->At4g35610    --------->ANAC58   <---------GLK1(2) <---------HSFC1(1)   cttggctgaagtatatacatgcttataagctactctttgccaacaaattcgcaacaatgatttctagaactataatcagttgatgggggaagaaaatgtt  24126900                                            <---------ARR14(2)                                            --------->ARR14(2)                       ----------->GT1      <---------GLK1(2)                      <---------TOE2(3)   --------->LBD16                      <---------TOE1(3)<-----------GT1                     ---------->DOF2  <-----------GT1                     <---------DOF5.7(2)<---------LBD16             ------->TEIL         <---------DAG2           <---------ANAC55(2)          <---------ATHB12        <----------DOF2   <-----------RAV1(2)                  --------->YAB1  <---------------AtSPL8   --------->AHL20(2)--------->GLK1(2)             --------->ANAC46    ------   gaaagttgtacaatgaatcaagttaaagttaaaatacttttttcccgattctctgcaggttacatatatgtgtatatacacagtatgtgaatgatcaaaa  24127000  Previous    Next  AGI:  At5g59840.1    Description:  Ras-related GTP-binding family protein. Identical to Ras-related protein ARA-3 (ARA-3) [Arabidopsis Thaliana] (GB:P28186); similar to ATRAB8, GTP binding [Arabidopsis thaliana] (TAIR:AT3G53610.2); similar to ATRAB8, GTP binding [Arabidopsis thaliana] (TAIR:AT3G53610.1); similar to ATRAB8 [Arabidopsis thaliana] (TAIR:AT3G53610.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO69245.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IP Range:  from: 24124441    to: 24126477    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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