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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
MYB83
<------
MYB46(1)
--------->
MYB59
--------->
CCA1(2)
--------->
ARR14(1)
--------->
ARR11(1)
--------->
ARR14(2)
<---------
ARR14(2)
<----------
DOF2
--------->
ARR11(3)
<-----------
GT1
<---------------
--------->
ICU4
<----------
DOF2
<-----------
GT1
<---------
TOE2(3)
----------->
ARR10
<<<<<<<<<<
MYB80
<---------
DAG2
<-----------
GT1
----------->
HVH21
<-------
TEIL
<----------
DOF2
<---------
AHL20(2)
---------->
DOF2
<---------
TOE1(3)
<---
tagatgcaaagatttggtcttttactttggtttgatttttttaacttttctcaatgtaaagtttttaactggaataaggtttctctgaccagtttagggc
23988100
--------->
ATHB12
<-----------
RAV1(1)
<---------
AHL20(2)
------>
ZmHOX2a(2)
<---------
ICU4
--------->
GLK1(2)
--------->
ATHB51
<---------
ARR14(2)
--------->
AHL20(2)
--------->
ARR14(2)
<---------
YAB1
<---------
ARR11(3)
--------->
ICU4
--------->
ARR11(3)
--------->
YAB1
<---------
AGP1
<----------
DOF2
<---------
ANAC58
<---------
YAB1
<------
ZmHOX2a(1)
<---------
YAB1
<---------
ANAC58
------>
ZmHOX2a(1)
--
AGL1
<------
ZmHOX2a(2)
----------->
HVH21
--------->
ANAC55(2)
<---------
ICU4
<---------
AHL20(2)
-------
DOF2
<---------
ARR11(3)
<----------
DOF2
<----------
DOF2
<---------
ANAC46
ttttagaggatctgttgtacatcttttgtgacattctcattctctttacatatttcttatctagacttttt
aaaaattcctcgtgtgtataattatttga
23988200
<---------
WOX13(1)
--------->
ATHB12
----------->
GT1
<------
MYB46(1)
<---------
YAB1
------>
MYB83
<------
MYB83
<---------
ANAC46
------>
MYB46(1)
<---------
WOX13(1)
<---------
ANAC58
--------->
MYB46(3)
<---------
YAB1
<---------
ANAC58
-------->
P
--------->
ZAT6
----
<---------
ANAC46
<-----------
HVH21
<---------
MYB52(1)
--------->
ATHB12
tgtgctacttgtctgattccacgagttcgagttttgtcgtgtgattgaattcgaattgtcacttaccaacgtcgttaatacactaacactatgattggtc
23988300
<---------
DEAR3(1)
------>
ZmHOX2a(2)
--------->
ARR14(2)
--------->
GLK1(2)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
LBD16
<---------
TOE1(2)
--------->
ARR14(2)
----------->
HVH21
------>
ZmHOX2a(2)
--------->
GLK1(1)
------>
MYB46(1)
--------->
LBD16
------->
HVH21
----------->
GT1
------>
MYB83
------->
TEIL
<-----------
HVH21
tgatcgctggatcggtgaaccaattggaaaatccagttcaagttgttttagcaaaaaccaatctcttctctgaaccggaaaactgtaaaccggtcagtac
23988400
<---------
At4g35610
--------->
At4g35610
<---------
RAP2.3(1)
<---------
DEAR3(2)
------>
NtERF2
<---------
DEAR3(1)
-
--------->
LBD16
--------->
ALFIN1
<---------
RAP2.3(3)
-
<-----------
GT1
--------->
ZAT2
--------->
MYB52(2)
<---------
ETT(2)
--------->
ANAC58
--------->
At4g35610
*
TSS
<------
NtERF2
--------->
ETT(2)
--------->
ANAC58
<---------
ZAT2
<-------
TEIL
<---------
DAG2
-
------>
ZmHOX2a(2)
--------->
ATHB12
<---------
At4g35610
<-----------
HVH21
<----------
DOF2
<---
ttgatccataagaaaccctccgagtgatttgaagggtttgagctgtgttgaaaatg
gttcgtcggctctctctaaacccctctttttgtcgactgcttct
23988500
--------->
O2
====================================
bZIP_DOF
<---------
TGA1a
<---------
O2
--------->
bZIP60(2)
--------->
TGA1a
<---------
ANAC46
--------->
ATERF1(1)
<---------
ATERF1(1)
------>
NtERF2
----------->
HVH21
--------->
DEAR3(1)
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
--------->
LBD16
<---------
LBD16
<---------
GLK1(1)
--------->
ARR14(2)
--------->
GLK1(1)
------->
TEIL
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
TOE2(3)
<------
NtERF2
--------->
GLK1(2)
--------->
ARR14(2)
------>
NtERF2
<---------
ATHB12
------->
TEIL
----------->
GT1
<-----------
HVH21
--------->
MYB46(3)
--------->
GLK1(2)
<---------
ANAC46
------>
MYB83
<------
NtERF2
<---------
ARR11(1)
--------->
DEAR3(1)
------>
MYB46(1)
<---------
ARR14(2)
-------->
ANAC46
--------->
MYB52(1)
<---------
CCA1(2)
-------->
ANAC58
--------->
AtMYB61
<---------
ARR14(1)
-------->
ANAC58
--------->
DEAR3(1)
<---------
ALFIN1
--------->
MYB52(2)
------
REM1(2)
--------->
MYB46(3)
<-----------
GT1
<----------
DOF2
---------->
DOF2
tcacgccgtcgaggaattcttctccaccaacgaatccggcgacgtcttatcaccaccttgtcgaatctttagttgatgttgtttaaag
gtgagtccaaat
23988600
<---------
WRKY18(1)
>>>>>>>>>
WRKY18
<------
NtERF2
------>
NtERF2
--------->
RRTF1(3)
--------->
RRTF1(2)
--------->
DEAR3(1)
--------->
DREB2C(2)
--------->
RAP2.3(2)
--------->
RAP2.6(2)
<---------
ALFIN1
--------->
RAP2.3(3)
--------->
RRTF1(1)
--------->
RAP2.3(1)
--------->
ERF1
--------->
RAP2.6(1)
--------->
ORA47(2)
--------->
ATERF1(1)
<---------
ATHB12
--------->
DEAR4(2)
------>
ZmHOX2a(2)
<------
NtERF2
--------->
GLK1(1)
------>
NtERF2
<---------
GLK1(1)
<---------
ATERF1(1)
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ARR11(3)
<-------
MYC3
--------->
ARR14(2)
------->
MYC3
<---------
ARR14(2)
<-------
PIF5
<---------
AGP1
------->
PIF5
--------->
ARR11(3)
<-------
MYC2
==================================
HOX2a_HOX2a
<-
------->
MYC2
<----------
DOF2
===================================
HOX2a_HOX2a
<-
--------->
ANAC58
------->
TEIL
------>
ZmHOX2a(1)
<---------
CCA1(2)
<---------
WOX13(1)
--------->
ANAC46
<---------
YAB1
<-------
TEIL
--------->
STY1(2)
--------->
ATHB12
--------->
ANAC58
--------->
YAB1
<---------
YAB1
<---------
STY1(2)
<---------
YAB1
tccacgcgccgccttgactttcatgaatgtgtgttttgatacatttcctacatattccgatgttttctagctagatctccaacgattttctgattgaatt
23988700
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
At4g35610
<---------
ANAC55(2)
<---------
GLK1(1)
--------->
ANAC55(2)
------->
TEIL
<-------
GAMYB
<-----------
ARR10
<------
MYB46(1)
--------->
ARR11(3)
----------->
GT1
<----------
DOF2
<---------
ARR14(2)
<------
MYB83
------>
ZmHOX2a(2)
--------->
MYB52(1)
<---------
MYB46(3)
<---------
ICU4
<---------
AGP1
--------->
MYB52(2)
--------------->
AGL15
<---------
AtMYB61
--------->
ZAT6
<---------------
AGL15
--------->
ZAT2
<--------
P
<---------
YAB1
<-----------------
AGL2
------>
ZmHOX2a(2)
<-------
GAMYB
<---------
YAB1
<---------
At4g35610
--------->
ARR14(2)
--------
TOE1(3)
<---------
ARR11(3)
<---------
TOE1(2)
--------->
ANAC58
<----------
DOF2
--------
TOE2(3)
--------->
ARR11(3)
<---------
TOE2(2)
--------->
ANAC58
<---------
ZAT6
tagggttggttacatgatgatctttgactctaactcgcag
gttttagctaataagggc
atgaaacggatctgctcggtttcaagtgttcaacttt
gtaag
23988800
<---------
YAB1
<----------
DOF2
--------->
DAG2
<---------
DAG2
---------->
DOF2
<---------
MYB59
--------->
YAB1
--------->
ANAC55(2)
<---------
YAB1
<---------
YAB1
<---------
ANAC55(2)
<---------
ANAC58
<----------
DOF2
<-
<-----------
GT1
--------->
ICU4
<----------
DOF2
--------->
At4g35610
<----
--------->
AHL20(2)
---------->
ID1
<---------
ANAC58
<---------
At4g35610
-----
ttaaactaaattacataactttattcttggcctcttgcaatgtttttgcttcttcaagtcttttgattttgtattagctcagtgactttgataaagtgat
23988900
<---------
ANAC58
--------->
YAB1
<---------
DAG2
<---------
ANAC58
<---------
ICU4
--------->
TOE1(3)
<---------
ANAC46
--------
YAB1
--------->
TOE2(3)
<-----------
GT1
<-----
-----
YAB1
--------->
YAB1
--------->
ARR11(3)
--------->
ARR11(3)
---->
ICU4
<---------
ATHB12
----------->
GT1
<---------
ARR11(3)
<---------
ARR11(3)
gatttttgatcatgaacagactaatgaattcttcataaccttatggattttgtgaattgaaacagatattactctcaattgcctatagatagattttaag
23989000
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AGI:
At5g59430.1
Description:
ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1); DNA binding. similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.1); similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21633.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 23984837
to: 23988171
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g59440.1
Description:
thymidylate kinase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO14608.1); contains InterPro domain Thymidylate kinase; (InterPro:IPR000062)
Range:
from: 23988457
to: 23990150
Orientation: Forward
Links:
TAIR
MIPS
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