Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ANAC58                                                                            --------->ANAC55(1)                                                                            --------->ANAC58                                                                            --------->ANAC55(2)                                                                            --------->ANAC46                                                                           <---------LBD16                                                                      <-----------HVH21                                                                   >>>>>>>>>>CAMTA3                                                                   --------->LBD16                                                               --------->ANAC46                                                               <---------ALFIN1  <---------CCA1(2)                                 ------>NtERF2  >>>>>>>>>>CAMTA1 -------->TGA1a                                  --------->ZAT14   >>>>>>>>>>CAMTA2 -------->O2                     <----------DOF2 <---------ZAT18   >>>>>>>>>>CAMTA5 ->MYB46(3)             --------->MYB46(3)       <---------ZAT14   ------>NtERF2 ->RAV1(1)            <-----------GT1           --------->ALFIN1 <---------LBD16             --------   cctcgtctctgcattcgcctcgagtaaccaattttcttttacaaaacacagtgcagcctctatcccctccgcgttcacacggattgaatttgaaaccttg  23879900                                           <---------CCA1(2)                                         --------->O2                                  --------->MYB46(3)                                 ------>MYB46(1)        --------->LBD16          ------>MYB83                             <---------------AtSPL8       --------->LBD16          ----------->RAV1(1)                      <---------ANAC58    ------>NtERF2      <---------LBD16          --------->AtMYB61                         <---------ANAC58 <---------ZAT18  =================================================bZIP_DOF              <---------ANAC46 <---------ZAT14  <----------DOF2      <------ZmHOX2a(1) --------->TGA1a              <----------DOF2     --------->ZAT14 ->TOE2(3)         --------->TOE1(2)     ========================================bZIP_DOF--------->ALFIN1   gcaactttccccgatgtcaaaactaggacaacaccaacatccctcgtctctgcattcgcctcgagtaaacaactttcttgtacaaaacacagtgcagcct  23880000                 --------->ANAC58                 --------->ANAC55(2)                 --------->ANAC58                 --------->ANAC55(1)                 --------->ANAC46                <---------LBD16                                             <---------ICU4           <-----------HVH21                                                --------->YAB1        ------>NtERF2                                                    <---------ICU4        >>>>>>>>>>CAMTA1                                                 --------->YAB1        >>>>>>>>>>CAMTA2                                                --------->ICU4        >>>>>>>>>>CAMTA3                                              --------->YAB1        >>>>>>>>>>CAMTA5                                           --------->YAB1        --------->LBD16                                           <---------AHL20(2)             <---      <---------LBD16                             <-------GAMYB   --------->AHL20(2)      <---------TOE2(3)    --------->ANAC46               <---------ANAC58              --------->AHL20(2) ------->TEIL-----    <---------ALFIN1               <---------ANAC58<---------MYB52(1) <---------ICU4<-------TEIL-----   ctatcccctccgcgttcacacggattgaatttgaattgtttgcaaacttctccgttgtcaaaacctatttaataataatcaatatgtacattaagaaata  23880100                                          <---------ICU4                                          ---                                          --------->YAB1                                         <---                                         --------->ICU4                                        ------                                --------->ZAT18                                               <------                              <---------ZAT18 --------->ANAC58         <---------REM1(1)      -------                              --------->ZAT18 --------->ANAC58     <---------ANAC46           -------      --------->AHL20(2)   --------->ALFIN1   --------->ANAC46    <---------At4g35610    --------->TOE1(2) ------YAB1             --------->DAG2   <---------YAB1          --------->MYB52(1)    ------->TEIL ---->AHL20(1)         <---------ZAT14 --------->YAB1      --------->RAP2.6(3)       --------->YAB1 ---->AHL20(2)         ---------->DOF2<---------YAB1      <------ZmHOX2a(1)         <---------ATHB12   ttatagaaaaaaatatgtttttaagtaaagtgtggacactataataataagccaataccaggactgctagcggatgtagactggcaatgaacataagata  23880200                                 <---------AHL20(2)                                <---------AHL20(1)                                <---------AHL20(2)                        --------->ANAC46 ---------->DOF2        --------->ANAC58                                                           -- ------>YAB1            --------->ANAC58                                                           <- ------YAB1           --------->ANAC46                                                             <- --->CCA1(2)         <---------REM1(2)                     <---------WOX13(1)                -------- ---ARR11(3)       --------->ARR14(2)                    --------->YAB1         <-----------GT1  <--- -->ARR11(1)       --------->ZAT14        <---------YAB1<---------YAB1         *TSS      <------ZmHOX2a(1) -->ARR11(3)  ---------->DOF2   --------->AHL20(2)   <---------AHL20(2)<----------DOF2 <---------TOE2(3)   tgataaagagaagagtgaaagtatacacgactaattttttttttgtgatagccattttatgatagacttggacctttgttttttacacttaggataagta  23880300             --------->DAG2   <---------AHL20(2)   --------->AHL20(2)   <-----------TBP                           ----------->GT1 <---------AHL20(2)                        ---------->DOF2------------>CBF <-----------TBP                    --------->CCA1(2)--------->GLK1(2) --------->AHL20(2)                --------->ARR11(3)--------->ARR11(3) ------->AHL20(2)             <---------WRKY38(1)   --------->RVE1(1) ----------TBP  ----------->GT1    <---------ARR11(3)<---------ARR11(3) --------AHL20(2)             <---------WRKY12<----------ID1      <----------DOF2 --->GT1  >>>>>>>>>GATA-1     <---------WRKY45----------->GT1  <---------ARR11(3)----------->GT1 ---- --------TBP---------->DOF2  --------->WRKY18(1)    --------->CCA1(1)       <-----------TBP <--------   tatatatatatagataaagtgtgattttgtggtcaaagatatatgaaaaggaaaaaatcttccaatttcttttcttagatttatagtaaaaaaactaaac  23880400                       --------->AHL20(2)                       <---------AHL20(2)                     --------->TOE2(3)                                               <---------ANAC55(1)                <---------MYB111(1)                                                  <---------ANAC46                <---------MYB46(2)                                                   --------->ANAC55(2)                <---------MYB59                                                      <---------ANAC55(2)               <---------ANAC55(2)                                                   <---------ANAC58           <---------ANAC58                                                  <---------MYB46(3)           <---------ANAC58                                                 <---------YAB1    --------->DAG2------>MYB83                                       ----------->GT1 <---------ANAC58  ---------->DOF2 ------>MYB46(1)                               <-----------GT1    <-----------GT1 ------>DOF2   --------->ANAC55(2)                         <------MYB46(1)--------->YAB1       ------ -------AGL15<-----------GT1                               <------MYB83  <---------YAB1--------->ALFIN1   aaagaaaaggttttcttacctaacattaattagtgattttttaaaaacttcaatttgcgataggttttacagagtataatggttgtaacgtgttgaaatt  23880500                                                                      ----------->GT1                                                             <---------ARR11(3)                                                             --------->AHL20(1)                                                       --------->ANAC46                                                       --------->ANAC58          --------->AHL20(2)                    <-----------RAV1(1)   <---------ANAC46  --------->AHL20(2)                     --------->ANAC58    --------->ARR11(3)  <---------AHL20(2)                     --------->ANAC58    <---------AHL20(1) --------->YAB1          ---------->DOF2 --------->ANAC46--------->ANAC46 --->GLK1(2)     <----------DOF2        --------->SPL7 --------->ANAC58     ---------->DOF2   -------   ctattaaaacaaaaaaatactttgtttaaaagaattagttcatacgccatatgttgcacacaaaatattgttttgtgaaaaagaatgtcatttcaagaat  23880600                          <----------DOF2                         <---------ANAC58                         <---------ANAC58                                      <------ZmHOX2a(1)                   <---------AHL20(2)                           --------->ANAC58                   <---------YAB1                               --------->ANAC58            ---------                 <----------DOF2                      <---------ZAT18      ---------->DOF2  ---------              <---------ALFIN1                     <------MYB46(1)      --------->ANAC58    <--------             --------->MYB46(3)    <----------DOF2 <------MYB83 --------->ANAC46           --------->YAB1            -------->P<---------WOX13(1)       --------->ARR14(2)       --------->ANAC58---------->DOF2 -->YAB1  --------->MYB46(3)    <-----------GT1<---------ARR14(2)     ---------->DOF2 <---------YAB1<   attggtcgtcaaacaaccactttaattgcttttgatacttttcagtgagtatttggtgaacttaacaagaaacaaagcaaaggacaatatcaaagatatt  23880700                                                                                                    <                                                                                                    <                       --------->At5g28300                                              <---------At4g35610                      ----------->GT1                                                   --------->At4g35610   <-----------GT1----------->TGA1           --------->ZAT18                          <---------ANAC58 >ARR11(3)      --------->YAB1               <---------ZAT18                          <---------ANAC58 >AHL20(1)      <---------ICU4          <---------ZAT14                --------->AHL20(2)         <-- -ARR11(3)     <---------YAB1           --------->ZAT14       <------NtERF2 --------->YAB1        <-- ---------ICU4 --------->ICU4   --------->CCA1(2)   <---------YAB1     <---------AHL20(2)         <--   gaatattacaatgtttgatgatgacggtaaacagatataaactgaagtgcccttatcaataggcaccatcaatataaataacaatagggcttctcacatt  23880800  Previous    Next  AGI:  At5g59105.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15757.1) Range:  from: 23879685    to: 23880279    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g59110.1    Description:  subtilisin-like serine protease-related. similar to ATSBT4.12, subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.3); similar to ATSBT4.12, subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.1); similar to ATSBT4.12, subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21564.1); contains InterPro domain Peptidase S8, subtilisin-related (InterPro:IPR015500) Range:  from: 23880756    to: 23881274    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version