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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                       --------->HSFB2a(2)
                                                                                       <---------HSFB2a(2)
                                                                                 --------->ZAT14
                                                                                 <---------ZAT18
                                                                               <---------At4g35610
                                        --------->At4g35610                    <------NtERF2
          <---------ANAC58           ---------->DOF2                           --------->At4g35610
          <---------ANAC58       --------->ANAC58                            <---------WRKY38(1)
<---------ALFIN1                 --------->ANAC58                            <---------WRKY12
--------->RAV1(1)          --------->ZAT14                           <---------At4g35610   ---------
--------ALFIN1 --------->LBD16 ---------->DOF2         <-----------GT1     <-----------HVH21    <---
 
gccacaccttgtgtcttccccaattctcagtggagaaagcaaaagctgagacagtatttatccctagtttgaagcagaggtcagcgaactcgagaagccg  23756300
                                                                                ------->MYC4
                                                                                <-------PIF5
                                                                                <-------MYC3
                                                                                <-------MYC4
                                                                                ------->MYC2
                                                                                ------->PIF5
                               --------->GLK1(2)                                <-------MYC2
                               <---------ARR14(2)                               ------->MYC3
                             --------->MYB46(3)                                <<<<<<<<<<ABI5
                       <---------TGA1a                                         <---------TGA1a
                       --------->TGA1a                                         --------->ANAC55(2)
                       <---------O2                                            <--------ABF1
                       --------->bZIP60(1)                                     <---------ANAC55(2)
                       --------->O2                                            =====================
                       --------->TGA2(1)                                       <<<<<<<<<<HY5
                       <---------TGA2(1)                                       --------->TGA1a
                       <---------ANAC55(2)                                     --------->O2
                       <---------bZIP60(1)                                     <---------O2
                       <---------ANAC46                                        <<<<<<<<<<AtMYC2
                       <---------bZIP60(2)                                 <-----------HVH21  <-----
                       >>>>>>>>>>HY5                                   --------->ZAT6         ------
                      ----------->STF1                              <---------ICU4         <--------
    <---------ALFIN1  <-----------STF1                       <---------ANAC58  --------->bZIP60(2)
--------->At4g35610  <---------TGA2(2)                       <---------ANAC58<---------ALFIN1 ------
<---------At4g35610 ----------->TGA1                        --------------->AtSPL3        <---------
>GLK1(2)            ----------->HVH21                <---------LBD16--------->YAB1<-----------HVH21
------MYB52(1)     <-----------HVH21<---------MYB52(1) --------->LBD16<---------YAB1    <------NtERF2
 
tttagctccagcctcgtagccttgtgacgtcaacaatccggtctgtttagcccatctccggtttccgtccattatcactgccacgtgtctcggcatcagc  23756400
       <---------ARR11(3)         ----------->RAV1(1)
=====================bZIP_DOF  ------>NtERF2
----At4g35610          ------>ZmHOX2a(1)                                               --------->AtLEC2
--->ZAT2      <---------ANAC58<---------ETT(1)                                         <---------YAB1
-At4g35610<----------DOF2 ------>ZmHOX2a(1)                                 --------->DAG2         <
--->At4g35610 <---------ANAC58--------->DEAR3(1)   --------->ZAT6          ---------->DOF2         <
--HVH21--------->ARR11(3)<---------ALFIN1        <-----------HVH21     <---------TOE2(3)          <-
 
tctctctgaagctctttaggtgtctcctcctctccgaccacataagttcccttgtcactacaaaaacattttttaagaaaaagctaagtcatgaaaattt  23756500
                                                                                  --------->ANAC58
                                                                                  --------->ANAC58
                                                                                ---------->DOF2
                                                                               <------ZmHOX2a(1)
                                                                              --------->ANAC58
                                       --------------->AtSPL8                 --------->ANAC58
                                       <---------------AtSPL8          <----------DOF2
                                    <---------GLK1(2)                  ------>ZmHOX2a(1)
                                    --------->ARR11(3)               =================HOX2a_HOX2a
                                    <---------ARR11(3)               ------>ZmHOX2a(2)
                                    --------->ARR14(3)              ==================HOX2a_HOX2a
                                    <---------ARR14(3)              <------ZmHOX2a(2)
                              --------->ANAC58                     <---------ARR14(2)             --
      <----------DOF2         --------->ANAC58                     <---------ARR11(3)             --
--------->LBD16              --------->DAG2  --------->ARR11(3)    --------->ARR11(3)        <------
---------ANAC46             ---------->DOF2  <---------ARR11(3)    --------->ARR14(2)       <------NtERF2
---------LBD16         ----------->GT1 <---------------AtSPL3     <---------GLK1(1)       <---------DEAR3(1)
--------LBD16      <-----------GT1----------->ARR10<----------DOF2--------->GLK1(1)     <-----------HVH21
 
tagcgggaactttcatcgagtttaaccagaaaaaagcaagattttgtacatcttctttttgtttttcagagatcctttagcaggaaagcaaggtcggaga  23756600
                                                                                       <---------ANAC46
                                                                                       <---------AtLEC2
                                                                                       <---------ANAC58
                                                                                       <---------ANAC58
                                                                           <---------STY1(2)
                                                                           --------->STY1(2)
                                                                          --------->ANAC58    ------
                                                                          --------->ANAC58   *TSS <-
                                                                     --------->ZAT18  <<<<<<<<<<FUS3
------->ANAC58                                                  --------->REM1(2)     <<<<<<<<<<ABI3
------->ANAC58                                                  <---------ZAT14  --------->ATHB12---
----ARF1                 --------->CCA1(2)                    <---------------------WRI1     <------ZmHOX2a(2)
 
caaggaagtagaagaagagagagaagagatagaaggaaccagagcatagacaacattgtagagagtgtgaagagtactagcaagtgatttgcatggatca  23756700
       <------------CBF
      --------->ATHB12
      --------->ATHB51
      <---------ICU4
     <---------YAB1
     --------->ICU4                                                                    <-----------GT1
   --------->YAB1                                  --------->HSFB2a(2)            <----------DOF2
  <-------TEIL       --------->ATHB12              <---------HSFB2a(2)            <---------DAG2
--->YAB1          <------------CBF              <---------ARR14(2)             <-----------GT1
--------AHL20(2)<---------AHL20(2)<---------MYB46(3)                   <-----------GT1 --------->ZAT6
------>AHL20(2) <---------YAB1   <--------P   <---------TOE1(2)       --------->AHL20(2) --------->ANAC46
 
taaaattcataattgagtttttattgactggctctggttgtttctctcgcagttttggaaaccttgccaaaaattaacttagttactttttcactaaaca  23756800
                                   ----------->GT1
                               --------->ARR14(2)
                            ----------------->AGL1
                            ----------------->AG
                     <---------AHL20(2)                                   <---------MYB52(1)     <--
                    <---------YAB1 <---------ANAC46             --------->YAB1                 -----
                   --------->AHL20(2)                        --------->YAB1                  <------
            ----------->HVH21  <---------ARR14(2)----------->GT1<---------ICU4             ---------
 
aacacgagttaagcattgacatttttattttgcctattcggtgaaacagagtaagtaaaaagattaataatctctctgttaagtagatgatgctcaatca  23756900
                                                                              --------->AHL20(2)
                                                                         --------->ARR11(3)
                                                                  --------->RAP2.6(2)
                                                                  --------->RAP2.3(2)
                                                                --------->At4g35610
                                                                <---------ZAT2<---------AHL20(2)
                        <---------ZAT6                          <---------At4g35610
-------ATHB12     <---------AHL20(2)                          <-----------RAV1(2)  <-------TEIL
---->WOX13(1)     --------->AHL20(2)--------->AtLEC2    <---------WOX13(1)  <----------DOF2
---ATHB12   ----------->GT1     -------->P            --------->ATHB12   <---------ARR11(3)
>WOX13(1)  <---------YAB1      <-----------GT1       <---------YAB1--------->At4g35610         -----
 
atgaactagtcagtatggttataaattgtgttatctaccattcaaactattttgtgttgattgagccagccgctaaaatctttaaatgcataaattttgt  23757000
                                                                  <---------AHL20(2)
                                --------->YAB1                   <---------AHL20(2)
                               <---------YAB1                    --------->AHL20(2)
                             -------->HAHB4                  --------->AHL20(2)
                             --------->YAB1              ---------->DOF2
                             <---------ICU4         <---------AHL20(2)
                            --------->ICU4          --------->ATHB12
     <---------AHL20(2)     <---------ATHB51       --------->AHL20(1)
     --------->AHL20(2)<------ZmHOX2a(2)           <---------AHL20(1)
  <---------AHL20(2)  <---------ARR11(3)           <---------AHL20(2)
 --------->AHL20(2)   --------->ARR11(3)           --------->AHL20(2)                             --
----->ID1         --------->CCA1(2)         ----------->GT1----------->GT1          ---------->DOF2
 
tgtattatataaattggtaagagacgatctaattatgatagtttctatagtgaatttattgaaagtaaataaatagcatttttaaaacaaagacaacaat  23757100
                                                                                              ------
                                                                                        --------->ARR14(2)
                                                                                        <---------ARR14(2)
                                                                                       <---------GLK1(2)
                         --------->ZAT6                                              <---------MYB59
                      <---------CCA1(2)                                          --------->WRKY12
                    ------->GAMYB                                                --------->WRKY38(1)
                 --------->MYB52(1)                                              --------->DEAR3(1)
            --------->AHL20(2)<---------ANAC55(2)       --------->AtLEC2         <---------ETT(2)
            <---------AHL20(2)--------->ANAC55(2)       --------->ANAC58         --------->ETT(2)---
------->MYB59   --------->MYB46(3)                      --------->ANAC58  <-----------GT1     <-----
 
ttaggtctcatgaaattaaacaaccgtatcactacgtactattgcatcaactatgagacatgcaaattctaagttttaaactcgtcgaccgaatcgcctc  23757200
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AGI:  At5g58782.1   
Description:  dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative. Identical to Dehydrodolichyl diphosphate synthase 4 [Arabidopsis Thaliana] (GB:Q8GY03;GB:Q8LFW9;GB:Q9LUY2); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21465.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441)
Range:  from: 23755373    to: 23756694    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g58784.1   
Description:  dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative. Identical to Dehydrodolichyl diphosphate synthase 5 [Arabidopsis Thaliana] (GB:Q570Q8;GB:Q9LUY1); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21465.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441)
Range:  from: 23757176    to: 23758220    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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