Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <-------GAMYB                             <---------MYB46(3)                          --------->LBD16<---------ANAC58                        --------->ATERF1(1)                        <---------LBD16  <---------ANAC58                        --------->DEAR3(2)              --------->SPL7 -------ALFIN1          <---------At4g35610         <---------At4g35610             <---------GLK1(1) ------>AtMYB61         --------->At4g35610         --------->At4g35610             --------->GLK1(1) ----ALFIN1          ----------->HVH21   <---------ANAC46                          <---------GLK1(1) --->AtMYB61        <-----------TGA1     <---------ANAC55(1)                      <------ZmHOX2a(1) --->DEAR3(1)       <-----------HVH21  <---------At5g28300      <----------DOF2 --------->ANAC58    < -->MYB46(3)       --------->ANAC46 <---------At4g35610------>NtERF2            --------->ANAC58    < -ALFIN1    <------NtERF2--------->DEAR3(1)         <---------LBD16          <---------SPL7    ------   ccacttccttcggcatcgtctccgtcaccggcgattggagttgccgtgtctgtatgcggacgttttcttttcttcttgtcgtaaggaatccctcgagcct  23662900                                                                                      --------->LBD16                                                                                      ------>ZmHOX2a(1)                                                                                 --------->GLK1(1)                                                                                 <---------GLK1(1)                                    --------->MYB46(3)                          <---------ARR14(2)                                 ------>ZmHOX2a(1)                          ------>NtERF2                               ------>ZmHOX2a(2)                            --------->ABI4(1)                              <------ZmHOX2a(2)                            --------->DEAR3(1)                             <---------ARR14(2)                            ------->GAMYB                             --------->ARR11(3)                            --------->DREB2C(2)                             <---------ARR11(3)                           --------->MYB46(3)<--------                             --------->ARR14(2)--------->At4g35610      <---------ALFIN1    ---------        ----------->HVH21  ----------->ARR10   <------NtERF2   <-----------RAV1(2)    <---------HSFB2a(2) ---------ANAC58       <---------YAB1------->GAMYB---------->DOF2       --------->AtMYB61---------->DOF2 ---------ANAC58       <---------TOE2(3)       <---------At4g35610<------ZmHOX2a(1)   --------->HSFB2a(2) --->TOE2(3)       <----------DOF2--------->MYB52(1)           <---------LBD16  --------->ARR14(2)   tagcctgtgtttgacggacttctttaagatagatcctaacagccttggcagcgaaagggtttgactcaggaagaccaccgccgatttcctcgaaagcagc  23663000                                                                             <---------SPL7                                                                         <------MYB46(1)                                                                         <------MYB83                                                                        <---------AtMYB61                                                                        --------->MYB46(2)                                                                        --------->MYB59                                                                    <------MYB83                                                                    <------MYB46(1)                                       <---------ANAC58            <---------MYB46(3)                                       <---------ANAC46            --------->MYB55(2)                                       <---------ANAC58        <---------DEAR3(1)--------->LBD16  ---         --------->At4g35610       <---------ANAC58   --------->ZAT18   --------->MYB111(1)      ----         <---------At4g35610       <---------ANAC58   <---------ZAT18 <<<<<<<<<MYB98            <----    <---------RAP2.6(2)           <---------ZAT2      --------->ZAT14 <---------MYB52(1)        <----   --------->RAP2.6(3)            --------->ZAT2      <---------ZAT14<-------GAMYB           -------- -At4g35610                  --------->HSFB2a(2)    <-------PIF5  --------->ALFIN1           -------- >At4g35610                  <---------HSFB2a(2)    ------->PIF5  <---------MYB55(1)    <----------ID1   ccttagacggccgatgagagcatcgagacttccccaagcttgcttgagagggcaagtgcactgagacggtgggttaggttgtccgaagaagggacaagcc  23663100                                                          --------->ANAC58                                                          --------->ANAC58                                                         --------->ZAT18                                                         <---------ZAT18        <----------DOF2                               --------->ALFIN1      ------->TEIL                                  <---------ANAC46                                - <---------ANAC46                                   <---------ANAC58                     <---------ANAC46 <---------ANAC58                                   <---------TGA1a                      <---------ANAC58 <---------ANAC58                                   <---------bZIP60(2)                  <---------ANAC58 <---------AtLEC2         ----------------------->TaNAC69(2)                            <------NtERF2 -------->HVH21      --------->MYB52(1)             --------->TGA1a                   --------->ALFIN1 ----->LBD16         ------>MYB46(1)                <---------ANAC58                <---------O2   <- -----ANAC58         ------>MYB83          --------->GLK1(1) <---------ALFIN1  <-------TEIL        -- -----ANAC58       <---------MYB59<-------TEIL    <------ZmHOX2a(1)          <---------ARR14(2) ----- ->ANAC58          <---------MYB46(2)  <---------TOE2(3)--------->ALFIN1     <---------GLK1(2)<------ ->ANAC58         ----------------->AGL1 <------ZmHOX2a(1)--------->ANAC46   --------->ARR14(2) <----   gtggcatggactttggtcttaccaaactggtcgaggtacttaaggaactcaaggacgtgtgcgccactacaacgagacagattcagaggtggcttgtggt  23663200                                                                             ------>NtERF2                                                                             <---------At4g35610    --------->ARR11(3)                                                       --------->At4g35610<----    <---------GLK1(2)                                  <---------LBD16 --------->HSFB2a(1)   --------  ----------->ARR10                              --------->RAP2.6(3)   <---------HSFB2a(1)   <------- ----->ZmHOX2a(1)                                --------->DEAR3(2)  --------->ARR14(2)  <------NtERF2 --------ANAC46                                 --------->SPL7       --------->ARR11(3)  <---------At4g35610 ------->TOE2(3)                                --------->MYB52(1)   <---------ARR14(2) <---------ERF1 ---->ARR14(2)                                <---------SPL7     <------ZmHOX2a(1)<----------DOF2 ---MYB46(3)      --------->ALFIN1          --------------->AtSPL3   <-----------ARR10 <---------DEAR3(1) -----ARR14(2)---------->DOF2      <----------DOF2  --------->ZAT2  <------ZmHOX2a(1)  <---------RAP2.3(3)   tccttagatactgaaggaaagtgttccagtctcgcctcttttgagactcgtaccggctcggggatgaggaggaacttgccgctgctttggctgcggtttc  23663300                                         <---------AHL20(1)                               <---------ANAC58                               --------->HSFB2a(1)                                        <---------ANAC58                             <------ZmHOX2a(1)                                            ------>ZmHOX2a(2)                           >>>>>>>GRF7   --------->AHL20(1)                               <---------ANAC46                        <-----------HVH21<---------ARR11(3)                             --------->ARR14(2)                       <---------bZIP60(1)                                         --------->ALFIN1       <----------DOF2 --------->bZIP60(1)--------->CCA1(2)                <---------ANAC58 -------GT1    ------>ZmHOX2a(1)         --------->ARR11(3)                <---------ANAC46 ->ARR14(2)  ------>ZmHOX2a(2) <---------HSFB2a(1)        <----------DOF2  <---------ANAC58 --ARR14(2)  =======================HOX2a_HOX2a<---------TOE2(3)       <----------DOF2  <---------ARR14(2)   tccctccatctttgatcctatggttatgtcaggacgttcttaagatattagggttcttgactttgttttgagtctttgtgtgtgtgtgtggatcgtgtgc  23663400                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                       <---------At4g35610                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  --------->TGA1a                                                                  --------->ANAC46                             ---------->DOF2                 ------->GAMYB                          <------NtERF2                      ===============MYC_MYB                 <                      ------------------------>ANAC81  --------->YAB1  --------->At4g35610       ----             ---------->DOF2 ===============================================bZIP_DOF        <--------   ctgagagagagagaagaaagagagaggcagagaaagagaagaagagtttatgttcagtcacaactcacaagtcagaagcaacaagttggatttgattatt  23663500                                                                    <---------ICU4                                                                  <---------AHL20(1)                                                                 --------->YAB1                                                              --------->YAB1                                                             <---------ATHB12                                                      --------->ANAC46                                                      <---------ANAC58 <---------AHL20(2)                                                      --------->ANAC55(2)    --------->At4g35610                                                     --------------->AtSPL8  <---------At4g35610 ------------CBF                                    <-----------GT1--------->ICU4       --------->ANAC58 ----->YAB1                  <-----------GT1    <----------DOF2 <---------YAB1          --------->ANAC58 -YAB1            <----------DOF2    <---------GLK1(2)<---------ANAC58 --------->AHL20(2)   catattgtagtttctcacttcttttttttttttacttcagtttctcacttctttttacgtcccatcataatatttatttatctgactaccaagaaaatgg  23663600                 <-----------GT1         ------>MYB83         ------>MYB46(1)       <---------MYB59                                              <---------GLK1(1)      --------->ANAC58                                         <----------DOF2      --------->ANAC58                                <----------DOF2              <---------AHL20(2)   aaaacgagacccaactaatttccgattcacactgtattagactattactctattagctttgatcactttgatttctgtaaatgattttttttttttttta  23663700                                                                           ---------->DOF2                         ---------->DOF2                                 --------->DOF5.7(2)                      --------->ANAC55(2)                               <----------DOF2                      <---------ANAC55(2)                              <---------ANAC46                   <---------MYB52(1)                               --------->ANAC46                  --------->TOE2(3)                                <---------LBD16                  --------->TOE1(3)                      <---------TOE2(3) <---------DOF5.7(2)                 ----------->GT1                   <------MYB83    <---------At5g28300              <---------CCA1(2)                    <------MYB46(1)<---------ICU4             <---------SPL7                  <---------AHL20(2)--------->YAB1               ---------            <---------ANAC58                <---------AHL20(2) <---------ICU4             <----------            <---------ANAC58                --------->AHL20(2)--------->ICU4   <------ZmHOX2a(1)  <--   gttttcgatttgggtcgtatcgttaagtaaagaatcacatctatttttaaatttggtttaagaaataatcacggcgttaaaggacatatttttcacgaag  23663800  Previous    Next  AGI:  At5g58500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21405.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60458.1); contains InterPro domain Protein of unknown function DUF640 (InterPro:IPR006936) Range:  from: 23662761    to: 23663309    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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