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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                           --------->YAB1
                                                           <---------ICU4
                                                           -------->ATHB1
                                                           --------->ATHB12     --------->ANAC58
                                                           <--------HAHB4       --------->ANAC46
                                                          <---------ATHB12   <---------WRKY38(1)
                                                          --------->ICU4 <------MYB46(1)
                                                        --------->WOX13(1)   <---------WRKY12
                                                 --------->AHL20(1)      <------MYB83
                                                 <---------AHL20(2)     --------->ALFIN1
    <---------At4g35610                          --------->AHL20(2)    --------->ALFIN1
    --------->At4g35610                         --------->AHL20(2)     <--------P------->GAMYB
  --------->MYB46(3) <---------ANAC55(2)        <---------AHL20(2)    <-------GAMYB  --------->ARR14(2)
----->GLK1(1)   <---------ICU4---------->DOF2   <---------ATHB51 <---------LBD16--------->ANAC58 ---
>DOF2          --------->AHL20(2)               <---------ATHB12----------->RAV1(2)  <---------ARR14(2)
 
attcaacagctaattcaattcattacatatgcagaaagaatggaatcccaaataatttgcaatcattacctggggttgggacaacgccaatctccatctc  23657700
        <---------ALFIN1
       <------NtERF2
      <---------ATERF1(1)
      ------>NtERF2
      --------->ABI4(1)
     --------->RAP2.6(2)
     --------->DEAR3(1)
     --------->ANAC58
     --------->ANAC46
     --------->RAP2.3(2)
     <---------ATERF1(2)
     --------->ANAC58
     --------->DREB2C(2)
     --------->RRTF1(2)
     --------->RRTF1(3)
     --------->RAP2.3(3)
     --------->ATERF1(2)
    --------->ORA47(2)
    --------->ATERF1(1)
    --------->RRTF1(1)                                  --------->DREB2C(2)
    --------->ERF1                                      ------->GAMYB
    --------->RAP2.6(1)                                 --------->DEAR3(1)
    --------->RAP2.3(1)                                --------->MYB46(3)
   --------->ABI4(1)                                   --------->ORA47(2)
   --------->At4g35610                                <---------ATERF1(1)
   <---------At4g35610                               --------->AtMYB61
   <---------ATERF1(1)                               <---------ALFIN1
   --------->LBD16                                --------->AtMYB61
   ------>NtERF2            <------ZmHOX2a(2)  --------->DEAR3(1)
  --------->DEAR3(1)       <-----------HVH21   <---------ALFIN1
  <---------ALFIN1      --------->LBD16        --------->AtMYB61
  --------->ANAC46     --------->DEAR3(1)   --------->ANAC46
 --------->ATERF1(1) <---------At5g28300   --------->MYB46(3)
<---------ATERF1(1) <---------ALFIN1    <---------GLK1(1)                  --------->YAB1          <
------>NtERF2  ------>ZmHOX2a(1)        --------->GLK1(1)------>NtERF2    <---------ATHB12         -
--->NtERF2     ====================HOX2a_HOX2a--------->MYB46(3) --------->YAB1                -----
 
tgcctccgccgccacttcctcttccaccgcgatcacctccttgatatccaccacctccaccgcctaaatcaaaacgaatcatcgaaatagtgagaaacta  23657800
                                                                        --------->MYB46(3)
                                                                      ----------->RAV1(1)
                                                                  ------>ZmHOX2a(2)
                                                                <---------ARR14(2)
                                                                <---------AGP1
                                                                --------->ARR14(2)
                                                                --------->ARR11(3)
                                                                --------->AGP1
                                                               <---------CCA1(2)
                                                             --------->YAB1 --------->YAB1
                     --------->ANAC58           <---------TOE1(3)--------->CCA1(2)
       ---------->DOF2     ----------->GT1      <---------TOE2(3)<------ZmHOX2a(2)
   <-----------GT1   --------->ANAC58           --------->DAG2----------->ARR10
---------ARR11(3) <---------ZAT2            --------->YAB1  <---------ATHB12>>>>>>>>>RAP2.2        -
-------->ARR11(3) --------->ZAT2     ---------->DOF2      --------->WOX13(1)--------->TOE2(3) <-----
----->DOF2   --------->At4g35610--------->GLK1(1)----------->GT1<---------ARR11(3)       --------->TOE2(3)
 
aagatttaacaaaagtagctcagcaaggaatggagaaatctaaagaatcataaggttatatcaatcagatctgcaacaatctaaatcacaaacctcgatt  23657900
                   <---------ARR14(2)
                   --------->ARR14(2)
             <---------ALFIN1     --------->RAP2.6(2)
            --------->MYB46(3)    --------->RAP2.3(2)
           ------>NtERF2        --------->LBD16------>NtERF2
          --------->DEAR3(1)    ------>NtERF2  ----------->RAV1(1)
        <---------ATERF1(1)     <------NtERF2  <-----------HVH21
        --------->ABI4(1)    <---------ATERF1(1)
        ------>NtERF2 --------->AtMYB61<---------MYB111(1)
       --------->DREB2C(2)  <---------SPL7     --------->LBD16
       ------->GAMYB  <---------ALFIN1 --------->MYB46(3) --------->DEAR3(1)                     <--
       <---------ALFIN1     <-----------HVH21 --------->ANAC58                                  ----
       --------->DEAR3(1)--------->DEAR3(1)   --------->ANAC58        <---------ARR14(2)        ----
      --------->DEAR4(2) <---------ALFIN1  --------->AtMYB61         <---------CCA1(2)        ------
    --------->AtMYB61 ------->GAMYB--------->At5g28300   --------->ATERF1(1)               ---------
    <---------ALFIN1<--------------OsCBT -------->P   <---------ABI4(2)           <---------ALFIN1
   <---------MYB55(2)<---------MYB55(2)<---------MYB46(2)<------NtERF2--------->ARR14(2)   <--------
   --------->MYB46(3)--------->MYB46(3)<------------MYB.PH3(2)     --------->AtMYB61 --------->AtMYB61
----->ZmHOX2a(1) --------->At5g28300   <---------MYB111(2)<---------ALFIN1        --------->AtMYB61
----GLK1(1)<---------ATERF1(1)--------->SPL7  --------->ANAC46 --------->SPL7     --------->DEAR3(1)
 
tcctctaccaccgcctccaccgtaaccaccgcgtccgccgtaactacctccgccagaggcaccgcgtccaccatatccagcatcaccacctccataacct  23658000
                                                    <---------RAP2.6(3)
                                                   --------->DEAR3(1)
                                                   --------->RAP2.3(2)
                                                   --------->RAP2.3(3)
                                                  --------->ATERF1(1)
                                                  --------->ORA47(2)
                                                  --------->DEAR4(2)
                                                  <------NtERF2
                                                 <---------ATERF1(1)
                                                 ------>NtERF2
                                                 --------->ABI4(1)
                                                --------->ATERF1(2)
                                                --------->DREB2C(2)
                                                --------->RAP2.6(2)
                                                --------->DEAR3(1)
                                                --------->RRTF1(3)
                                                <---------DEAR3(1)
                                                --------->RRTF1(2)
                                                --------->RAP2.3(2)
                                                --------->RAP2.3(3)
                                               --------->RRTF1(1)
                                               --------->ERF1
                                               --------->DEAR4(2)
                                               --------->ATERF1(1)
                                               --------->RAP2.6(1)
                                               --------->RAP2.3(1)
                                               --------->ORA47(2)
                                              --------->At4g35610
                                              --------->ABI4(1)
                                              --------->LBD16
                  ------------------>SPL14    <---------ATERF1(1)
         <---------ARR11(1)                   <---------At4g35610
       <---------SPL7                         ------>NtERF2
    ------>NtERF2 --------->DEAR3(1)         --------->DEAR3(1)
    --------->LBD16     --------->SPL7    <---------ALFIN1
   --------->DEAR3(1)  --------->SPL1(1) <---------ZAT2
   --------->ANAC46    <---------SPL1(1) --------->ZAT2    <---------------AtSPL8
  --------->SPL7  --------->AtMYB61     ------->TEIL------>NtERF2
 <---------ATERF1(1)  <---------SPL7   <---------ALFIN1  --------->ATHB12       <---------STY1(1)
<---------ALFIN1  <---------ALFIN1    --------->ZAT18   <---------YAB1          --------->STY1(1)
-------ALFIN1    --------->MYB46(3)   <---------ZAT18   --------->ICU4      <---------WRKY18(1)
-->MYB46(1) --------->ANAC46--------->ANAC58 --------->ANAC46              ----------->HVH21
-->MYB83<---------CCA1(2)----------->HVH21--------->AtMYB61--------------->AtSPL8
--->AtMYB61 --------->WOX13(1)  ---------->TaMYB80--------->RAP2.3(1) --------->ANAC58             -
>ARR14(2)<---------ARR14(2) --------->ANAC58 <---------ALFIN1         --------->ANAC58           ---
-ARR14(2)--------->ARR14(2)<---------LBD16--------->DEAR3(1)          --------->ANAC46           ---
 
ccccctccgccgtatccatcaccaccgtacgacggaataggcgcacctccgccgccgtcttgattgtacatcccagccatgacctagggtttgcgataaa  23658100
                                                                     --------->AHL20(2)
                                                                     <---------AHL20(2)
                                                               <----------DOF2
                        <-----------HVH21             --------->GLK1(2)
    --------->AtMYB61<---------ANAC58                 --------->ARR11(3)
------->GAMYB --------->MYB52(1)                      <---------ARR11(3)
-------->MYB46(3)    <---------ANAC58                --------->CCA1(1)                         <----
------>MYB52(1)    <---------ARR14(2)        *TSS    --------->RVE1(1)                         <----
-------->RAV1(1)   ------->TEIL  <----------DOF2 --------->AHL20(2)<-----------TBP  --------->YAB1 <
 
caacagaccaaaactcttaacgaatcgtgtgagagcctttttagacgtagaataaaaaatctcgcgttttatttatatttctctcaaaaatagtggaact  23658200
                                                       --------->ARR14(2)
                                                  ------>MYB46(1)
                                                  ------>MYB83
                                                  -------->P
                                                  --------->MYB52(1)
                                                 --------->MYB55(1)
            --------->TOE2(3)                   <---------MYB46(2)
 <------------CBF  --------->TOE1(3)            ----------->HVH21             <----------DOF2
<---------ICU4     --------->TOE2(3)            --------->MYB46(3)            <---------DAG2
--------->ATHB12 --------->ARR11(3)            --------->DEAR3(2)             --------------->AGL15
--------->ATHB51 <---------ARR11(3)       <----------DOF2                    <---------ANAC58
-----DAG2   --------->TOE1(3)  <-----------GT1<---------At5g28300 --------->MYB52(1)
------DOF2  --------->YAB1  <----------DOF2  <-----------GT1      <-----------GT1
---------YAB1   <---------CCA1(2)     <---------CCA1(2)<---------ARR14(2)    <---------ANAC58
 
ttattattgcatttatcttaaatcttaaattcttttacatcttatcttttaccgaccggtttcccaaaataactggacttgctttttttatcaaataaga  23658300
                                                                 --------->ANAC55(2)
                                                                 --------->ANAC46
                                                                 <---------ANAC55(2)
                             <----------DOF2                     <---------ANAC58
                            --------->TOE1(3)          <---------MYB52(1)
                            --------->TOE2(3)     --------->MYB52(1)
                      --------->At4g35610         --------->YAB1 <---------ANAC58
                    --------->YAB1           ----------------->AGL2
                 <---------ICU4          <---------ALFIN1       <---------TOE2(3)
                 --------->YAB1          --------->ATERF1(1)   <-----------GT1          <-----------RAV1(1)
 
caacatggttctaaggcccataatcatctaacctttacgaaggcccagcccaataacagttattttttacgtagcccaatacagttttgaaatgtggcta  23658400
                                                          <---------LBD16                       ----
                                                   ---------->DOF2                        <---------At4g35610
                                               --------->TOE2(3)                          --------->At4g35610
                        --------->AtMYB61      --------->TOE1(3)     <------ZmHOX2a(1)    <---------ZAT2
                  <---------ARR14(2)           <----------DOF2--------->SPL7     <------ZmHOX2a(1)
                  --------->ARR14(2)       --------->REM1(1)--------->LBD16 --------->YAB1--------->ZAT2
 
ttagagagaaattagaggcaaaatccaccaaaattttgctataactacaactttaaaagagtccggacagtaggaacaataagaggagaggccagctctg  23658500
                                                               ------>ZmHOX2a(1)
                                                               ================HOX2a_HOX2a
                                                              --------->TOE2(3)
                                                          --------->YAB1
                                                         <---------ATHB12
                                                         --------->ICU4
                                                    --------->LBD16               <---------ZAT6
                                                  --------->DEAR3(2)              --------->ICU4
                                                <---------ARR14(2)          --------->ZAT6
   >>>>>>>>>SARD1               <-----------HVH21--------->MYB52(1)       ----------->RAV1(1)      -
   >>>>>>>>>CBP60g       --------->YAB1         --------->ARR14(2)      <------ZmHOX2a(2)       ----
------>DOF2         <---------YAB1           <---------HSFB2a(2)      <------ZmHOX2a(1)         <---
 
aaagaaatttggagtttgcgaagatgaatgagaagtgtcaagttgaatcgagaaccggcaattatcctcagaaggatcaacagtagtgatcaaaccaagt  23658600
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AGI:  At5g58470.1   
Description:  TAF15b (TBP-ASSOCIATED FACTOR 15b); binding. similar to TAF15 (TBP-ASSOCIATED FACTOR 15), RNA binding [Arabidopsis thaliana] (TAIR:AT1G50300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41174.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876)
Range:  from: 23654933    to: 23658146    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g58480.1   
Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 9 precursor [Arabidopsis Thaliana] (GB:Q9FGH4); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G17180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41173.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781)
Range:  from: 23658368    to: 23660079    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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