Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <------MYB46(1)                             <---------YAB1  <---------ANAC46              <---------AHL20(2)  <------MYB83                  --------->AHL20(2)                                         --------->ICU4 --------->MYB111(2)            --------->AHL20(1)                                         <---------ATHB12 --------->MYB46(2)   <---------WOX13(1)    --------->YAB1                            --------->ANAC58 -----AHL20(2)      --------->ATHB12       <---------ATHB12                           --------->ANAC46 --ICU4     --------->GLK1(2)   <---------AHL20(1)   ---------->DOF2                  --------->ANAC58   agtttggtgagaagaatttgagtcattgacataataaattttgaaatcatgtttgaaaaggagactataagctagtatcggtccctagacgaaatgatgc  23372300                                                                                              -------                                 <-----------GT1                                         <---------WOX13(1)                            <----------DOF2                                           <---------YAB1                   --------->AHL20(2)                                             <---------DDF1                   <---------AHL20(2)                                             >>>>>>>>>>DREB1A         --------->ANAC46<-----------GT1                                          >>>>>>>>>>DREB2A      --------->TOE1(2)<---------AHL20(2)          --------->AHL20(2)             <---------RAP2.6(3)      --------->TOE2(2)--------->AHL20(2)--------->TOE2(3)                --------->AHL20(2)>>>>>>>>>GATA-1   ctcaagaacatacgaagtttattaattaaactttatttctattcattaacaaataaaacagccaaaacaaaactaattcaataccgacatgatagataaa  23372400                                                               <---------ARR11(3)                                                --------->ARR11(3)                                                --------->AHL20(1)                                                <---------AHL20(1)                                              <---------AHL20(2)                                              <---------AHL20(1)            ---------->DOF2          --------->TOE1(3)                   --------->AHL20(1)      ------>ZmHOX2a(1)          --------->TOE2(3)                --------->AHL20(1)  <---------GLK1(2)    --------->YAB1                         --------->AHL20(2)  --------->ARR14(2)           <--------  --------->AtLEC2                         <---------AHL20(2)  <---------ARR14(2)         <---------- -->AHL20(2)                      --------->MYB52(1)           --------->ARR11(3)     --------->AHL20(2)   atccattcaaaacctcaaacaaatttgttttggagttaacagaaataaaatattttgaatttgtagatactcctacatgaaagaaaaatgaattacgata  23372500                  <---------AHL20(2)                  <---------AHL20(1)                  --------->AHL20(2)               --------->AHL20(1)              --------->AHL20(2)              --------->ATHB51                         <---------ARR14(2)              <---------AHL20(2)                       <---------ARR11(3)              <---------ICU4                           --------->ARR11(3)  --------->AHL20(2)             --------->ICU4                  --------->HSFB2a(2)      --------->AHL20(2)         <---------MYB59                     <---------HSFB2a(2)      <---------AHL20(2)  <------ZmHOX2a(1)                   <---------YAB1   --------->ARR14(2)  <---------AHL20(2)     --- -YAB1 ------>MYB83                  <-----------GT1  <---------CCA1(2)  <---------YAB1           <-- -GT1  ------>MYB46(1)         <---------MYB59 --------->ANAC46  <---------YAB1         <---------ATHB12   tcaaggaccagcctaattattttattttgttagcctaattttcatttctacaaaacatatctccatcacgattttattaaaacaaatcccataattcgat  23372600                          <-----------HVH21                        -------->ABF1                        ------->MYC3                        ------->MYC4                        <-------MYC4                        <-------MYC2                        ------->MYC2                        <-------MYC3                       <---------ANAC55(2)                       <---------O2                                                         ---------                       --------->O2                                                         ---------                       --------->ANAC46                                                     ---------                       --------->ANAC55(2)                                                *TSS                       --------->TGA1a      --------->AHL20(2)                      --------->ARR11(3)               <---------YAB1      <---------YAB1                                   <---------ARR11(3)               --------->ICU4     ------------>CBF                            ----------->HVH21    --    <---------ANAC46   <---------TGA1a   --------->TOE2(3)                  <---------AtLEC2--------- ------>AHL20(2)    <---------REM1(2)   ----------->GT1             ----------->HVH21<------ZmHOX2a(2) -------AHL20(2)<---------ICU4   <-----------GT1                 <-----------HVH21 <---------At4g35610   tttattatgtggatgtcatgtttacacgtgtcatattacaattcgttaaaatacagtgtctcttctctgtccgactgggcatgacagatcatccaagcaa  23372700                   ------->MYC2                   <-------MYC2                   <-------MYC3                   ------->MYC3                  --------->ANAC58      <---------MYB59     --------->ANAC58                                                         --------->AHL20(2)     --------->ANAC58                                                    --------->AHL20(2)     --------->ANAC46                                                  --------->ANAC58 >AtLEC2          --------->ANAC58                                     --------->ANAC58      <------- >ANAC46        <---------ALFIN1                                --------->ZAT18          <---------YAB1 >ANAC58------>MYB83                                            <---------ZAT18    --------->DAG2 ------->AHL20(2)<---------TOE1(2)                              --------->ZAT14   ---------->DOF2   < >ANAC58------>MYB46(1)               ---------->DOF2        <---------ANAC46--------->AHL20(2)     -   atcaaatacccaactctcacacgttctcaaacaaaaacttcaaagagagagagagagagagttttgtgaactcaagaaaataaaaaaagttatagttaat  23372800                                                   --------->ABI4(2)                                                   ------>NtERF2                                                  <---------ANAC46                                                 <------NtERF2                                                ------>NtERF2                                                <---------DEAR3(2)                                                <---------ATERF1(1)                                                <---------ORA47(2)                                                <---------RAP2.6(1)                                               <---------RAP2.3(3)                                               <---------RRTF1(2)                                               <---------RAP2.3(2)                                               --------->ATERF1(2)                                               <---------DEAR3(1)                                               <---------ATERF1(2)                                               --------->DEAR3(1)                                               --------->ALFIN1                           --------->ZAT14                                              <------NtERF2                            <---------ANAC46                                              --------->ATERF1(1)                     --------->ATERF1(1)                                              <---------ABI4(1)                       <------NtERF2                                              ------>NtERF2                          ------>NtERF2                                             --------->DEAR3(1)                      --------->ABI4(1)                                             <---------ATERF1(1)                    --------->RAP2.3(2)                                            --------->ATERF1(1)                     --------->DREB2C(2)                                            --------->ALFIN1                        --------->RAP2.3(3)                                           --------->ATERF1(1)                      --------->DEAR3(1)                                           ------>NtERF2                            --------->RRTF1(3)                                           <---------ABI4(1)                        --------->ATERF1(2)                                          <---------ATERF1(1)                       <---------DEAR3(1)                                          <---------DEAR3(1)                        --------->RRTF1(2)                                          <---------ANAC58                          --------->RAP2.6(2)                                          --------->ALFIN1                         --------->ERF1                                          <---------ANAC46                         --------->RAP2.3(1)                                         --------->ATERF1(1)                       --------->ORA47(2)                                     --------->ALFIN1<----------DOF2               --------->RAP2.6(1)                                    <---------ARR14(2)                             --------->RRTF1(1)                                   <-------GAMYB<---------RRTF1(1)                 --------->DEAR4(2)                                   <------NtERF2<---------RAP2.3(1)                --------->ATERF1(1)                                  <---------SPL7<---------ERF1                    ------>NtERF2                                  <---------MYB46(3)<------NtERF2                 --------->ABI4(1)                                 <---------ANAC46--------->ATERF1(1)             --------->DEAR3(1)                                <---------LBD16<---------RRTF1(3)                --------->ANAC46                               --------->LBD16--------->RAP2.3(1)               --------->DEAR3(2)                               ------>NtERF2<------NtERF2   ----------->HVH21   --------->MYB46(3)                              <---------DEAR3(1)<---------DEAR4(2)     --------->WOX13(1) <---------ZAT14 --AHL20(2)                  <---------LBD16<---------DEAR3(1)     ----------->GT1<---------ATERF1(1) ---------ARR14(2)      --------->WOX13(1)<---------ANAC58  ----------->TGA1   <---------DOF5.7(2) -------->ARR14(2)    <---------ATHB12 <---------RAP2.3(3)------>ZmHOX2a(1)    <---------At5g28300   gggattcggcttagagagtatcaaatcaatctccggcggatggggcgcggcggcgcgttcctgtgacgcttgtaaatcagttaccgccgccgtgttctgt  23372900                                                                                                    -                                                                     --------->ALFIN1               -                                                                   --------->ALFIN1                 -                                                                  ------->MYC3                      -                                                                  <-------MYC2                      -                                                                  ------->MYC2                      -                                                                  <-------MYC3                      <                                                                 <---------ANAC46                   -                                                                 <---------ANAC58                  --                                                                 <---------ANAC58                  --                                       --------->GLK1(2)    <-------PIF5                           <-           <----------DOF2          --------->ANAC58        ------->PIF5                          ---         --------->At4g35610        --------->ANAC58       <---------TGA1a                       ----         --------->ZAT2      ----------->HVH21             --------->TGA1a                      <----         <---------ZAT2     ------->MYC3                  ------>NtERF2                      --------         <---------At4g35610<-------MYC3              --------->ANAC58                       --------  --------->WRKY38(1)    <---------ANAC58             --------->ANAC46                      ---------  --------->WRKY12       <---------ANAC58             --------->ANAC58                      ---------   cgagttgactcagctttcttatgcatagcatgtgacacaagaatccattccttcactcgccacgagcgcgtgtgggtttgtgaagtttgtgaacaagctc  23373000      <------NtERF2      <---------MYB52(1)     <-----------HVH21     ------>NtERF2     <---------RAP2.6(3)    --------->RAP2.6(2)    --------->RRTF1(2)    --------->ATERF1(2)    --------->bZIP60(1)    --------->O2    --------->RRTF1(3)    --------->ANAC46        --------->DEAR3(1)    --------->RAP2.3(2)    <------NtERF2    <---------ATERF1(2)    --------->RAP2.3(1)    --------->RAP2.3(3)    --------->ATERF1(1)    --------->DEAR3(1)     --------->DEAR4(2)   --------->RRTF1(1)     --------->ABI4(1)   --------->RAP2.3(1)    <---------ATERF1(1)   <------NtERF2          ------>NtERF2   --------->ATERF1(1)    <---------RAP2.3(1)   --------->ERF1        --------->DEAR3(1)  ------>NtERF2          <---------DEAR3(1)  --------->ABI4(1)      --------->ANAC46  <---------ATERF1(1)    --------->RAP2.3(2) --------->RRTF1(3)      --------->RAP2.3(3) --------->RRTF1(2)     --------->ATERF1(1) --------->DEAR3(1)     <------NtERF2 <---------DEAR3(1)     --------->DEAR4(2) --------->DREB2C(2)    --------->RRTF1(1) --------->RAP2.3(2)    --------->ORA47(2) --------->ATERF1(2)    --------->RAP2.3(1) --------->RAP2.6(2)    --------->ERF1 --------->RAP2.3(3)    --------->RAP2.6(1) -------->RRTF1(1)     ------>NtERF2 -------->ERF1         <---------ATERF1(1)                                                     <----- -------->DEAR4(2)     <---------RRTF1(1)                                                    <-------MYC3 -------->RAP2.3(1)    <---------RAP2.3(1)                                                   <-------MYC2 -------->ORA47(2)    --------->DEAR3(1)                                                     ------->MYC2 -------->ATERF1(1)   <---------DEAR3(1)                                                     ------->MYC3 ------NtERF2         <---------O2                                                          <-------- -------->RAP2.6(1)   --------->ANAC46    <-------GAMYB                                     <-------- ---->NtERF2          --------->O2        --------->At4g35610                           <---------MYB52(2) ------->LBD16       --------->ATERF1(1) --------->MYB52(2)                             --------->ANAC58 --------ATERF1(1)   <------NtERF2    <-----------HVH21                                 --------->ANAC58 ------>ANAC46       --------->SPL7   <-----------TGA1                               <------NtERF2 ----->MYB46(3)     <---------ATERF1(1) <-----------RAV1(2)<-----------GT1          <-----------HVH21 -----ATERF1(1)     ------>NtERF2<----------DOF2      <---------MYB52(1)            <-----------TGA1- ->ZAT2            --------->DEAR3(1)<---------ANAC58 --------->ARR14(2)           --------->RAP2.6(2) ->At4g35610       ----------->HVH21 <---------ANAC58 <---------ARR14(2)           --------->ANAC46<- >ANAC58          --------->DEAR3(2) <---------ANAC46<---------RAP2.6(3) ------>ZmHOX2a(1) ------->TEIL >ANAC58      ---------->DOF2------>NtERF2<---------At4g35610    <---------At4g35610<---------RAP2.6(3)   ccgccgccgtcacttgcaaagccgacgccgccgctctttgcgtcagttgtgatgccgatattcactctgctaatcctctcgctagccgtcacgaacgtgt  23373100                                      <------NtERF2                                     ------>NtERF2                                    <---------ETT(2)                                    --------->DEAR3(1)                                   --------->ATERF1(1)                                   <------NtERF2                                  <---------ATERF1(1)                                  ------>NtERF2                                  <-----------HVH21                                 --------->RAP2.3(2)                                 --------->O2                                 <---------O2                                 --------->DEAR3(1)                                --------->ERF1                                --------->RAP2.3(1)                                --------->RRTF1(1)                              --------->DEAR3(1)                                                <----                              ------->GAMYB                                              <---------MYB52(1)                             <------------AtMYB77                                   --------->DEAR3(1)                             --------->DEAR3(2)                                     <---------ALFIN1       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------GLK1(2)                 --------->AtMYB61 --------->LBD16             --------->MYB46(3)  <---------At4g35610               <---------MYB55(2) <-----------HVH21         <---------ARR14(2)    <---------ZAT2                    --------->MYB46(3) ------HVH21               --------->ARR14(2)    --------->At4g35610             --------->ANAC46<--- -ANAC58                --------->RAP2.6(2)--------->ARR11(3)         XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P -ANAC58              --------->At4g35610  <---------ARR11(3)      --------->ARR14(2)   ------------- -------->ANAC46      <---------At4g35610  <-----------ARR10       <---------ARR14(2)   <-------GAMYB -----NtERF2        <-----------RAV1(2)   <---------GLK1(2) <----------DOF2     --------->MYB46(3)---   ccccgtcgaaactttcttcgactcagccgaaaccgccgtcgccaaaatctcagcttcttcgacttttggtatccttggctcatccaccaccgttgattta  23373200  Previous    Next  AGI:  At5g57660.1    Description:  zinc finger (B-box type) family protein. Identical to Zinc finger protein CONSTANS-LIKE 5 (COL5) [Arabidopsis Thaliana] (GB:Q9FHH8;GB:Q8L9H4;GB:Q93ZC8); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT5G24930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14549.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 23372690    to: 23374215    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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