Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->HSFB2a(1)              ---------                                                           --------->HSFC1(2)               <--------                                                          --------->ARR14(2)       --------->ANAC46                                                         <---------GLK1(2)         --------->ANAC58                              <---------At4g35610        --------->ARR14(2)   <---------At4g35610                              --------->At4g35610        <---------ARR14(2)   <------NtERF2--------->ANAC46                              --------->ZAT2           --------->DEAR3(1)     --------->LBD16                          --------->ALFIN1          --------->DEAR3(1)        --------->At4g35610                        <---------TOE2(1)          -------->ZAP1             --------->ANAC58             <---------HSFB2a(2)                   --------->DEAR3(2)        --------->ANAC58 <------    ----------->GT1     <---------TOE1(1)          --------->MYB46(3)        --------->RAP2.6(2)    <---------MYB46(3)<------ZmHOX2a(1)          <---------WRKY18(1)  <----------DOF2     --------->LBD16 ----->ZmHOX2a(2)  <------ZmHOX2a(1)            --------->WRKY38(1)   <---------DAG2  ------->TEIL  - -->TOE2(3)  --------->HSFB2a(2)                --------->WRKY12<---------ALFIN1   --------->ANAC58 < --GT1      <---------LBD16 <------ZmHOX2a(1)   ----------->HVH21 <-----------------AGL1 --------->ANAC46   gatcgattgttaattctgggaggaggacgaggagctgaagaccgaaacgcttgaccgccgattcttccaccgcttttggccgcaaacgcatccccaacac  23247500                  --------->MYB46(3)                 -------->P                 ------>MYB83                --------->MYB55(1)                ------>NtERF2               --------->DEAR3(1)            --------->ANAC58    --------->ANAC58                                    <---------YAB1    --------->ANAC58     <---------ANAC58              <-----------GT1  ---------->DOF2------>MYB46(1)                --------->ZAT2    ------>ZmHOX2a(1) -->RAV1(1) --------->ANAC46                    --------->At4g35610         >>>>>>>>>GATA-1 -ALFIN1    --------->ANAC58                    <---------At4g35610  <---------ATHB12 ---ALFIN1---------->DOF2<---------ANAC58       <---------ZAT2 ---------->ID1                      <- -------->HSFB2a(2)  <---------MYB52(1)        ------>NtERF2  <-----------GT1      ---------->DOF2 -- ---------HSFB2a(2)------->GAMYB              <-----------RAV1(2)<---------MYB59  --------->AHL20(2)   ttcccaaagccaaaacgccaaccgctagcgtcgcgattgccaacttcgccagctgattttcatttttcctaatcaatagataaataaaagattgaataag  23247600                                                                                       --------->CCA1(2)                                                                               <---------ANAC58                                                                               <---------ANAC58                        --------->AHL20(2)                                <---------ANAC46  ---------                        <---------AHL20(2)    <---------ICU4             <------NtERF2<---------ARR14(2)      --------->LBD16  --------->AHL20(2)    --------->ICU4         <---------ANAC46  --------->ARR14(2) ------>MYB46(1)  ----------->GT1          --------->YAB1           <---------ANAC58  --------->ARR11(3) ------>MYB83  --------->GLK1(2)          --------->AHL20(2)        <---------ANAC58  <---------ARR11(3) --------MYB59<---------GLK1(2)     ----------->GT1         --------->GLK1(2)  <---------ANAC46 ------->AtMYB61 ----------->GT1 ---------->DOF2  <---------At5g28300  <---------DEAR3(1)<-----------GT1   accaaacccgagtttagaatcggaaaaaaattttctaaaggtaaataaaaattaccgagaagaatcagtttcgtcgtcgtggtgtgaagatttacaacag  23247700                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                            --------->ARR14(2)                                   <---------ANAC46<---                ----------->GT1                                                  <---------ANAC58<---       <------ZmHOX2a(1)    <---------ARR14(2)                                   <---------ANAC58----      <----------ID1 <---------TOE2(3)                                      <----------DOF2      <---     --------->MYB59 <---------YAB1          <-----------RAV1(1)        --------->DAG2           <--- -->RAV1(1)    <---------TOE2(3)             --------->ALFIN1          ---------->DOF2           <---   attgaattaggacgagtgaggttaacattggatttgggtttaaaactgtgttggaaactgaaattgtttgacaaaaagctttgtcgtgaagaagctatgg  23247800      <-------TEIL -----NtERF2 ------->RAP2.3(1) -------RAP2.3(1) -------ORA47(2) -------ATERF1(1) -------ERF1                                                      ------>ZmHOX2a(1) --->NtERF2                                                     <---------HSFC1(2) ------DREB2C(2)                                                *TSS ------RRTF1(3)                                                 --------->HSFC1(2) ------RRTF1(2)                                                <------ZmHOX2a(2) ------ANAC46                                                 <---------GLK1(2) ------RAP2.3(3)                          --------->ARR11(3)  <---------ARR14(2) ------RAP2.3(2)                      ---------->DOF2         --------->ARR11(3) ----->ATERF1(2)                 <------MYB46(1)          ---------->DOF2 ------ATERF1(2)                 <------MYB83<----------DOF2  --------->ARR14(2)                 <--- ------DEAR3(1)                 --------->MYB59  <-----------GT1------>ZmHOX2a(2)              <----- ------RAP2.6(2)       <---------ANAC46   <---------ARR11(3)  <---------ARR11(3)        <-----------TBP   cggcgaaatacatttttgttttgtttctggtgatttggtctaaagctcttttttctctgttaaagatccttctcgtcttcttggttttgtttttgtagct  23247900                        <-------MYC2                        <-------MYC3                        <-------MYC4                        ------->MYC4                        ------->PIF5                        <-------PIF5                        ------->MYC3                        ------->MYC2                       <---------TGA1a                                          <---------GLK1(1)                       --------->O2                                             --------->GLK1(1)                       <---------PIF3(3)                                       --------->ARR11(3)                       <<<<<<<<<<HY5                                          --------->YAB1                       <---------ANAC46   <---------ANAC58           --------->ANAC58 --------->ANAC58                       --------->PIF3(3)  <---------ANAC58           --------->ANAC46 --------->ANAC58                       --------->TGA1a  <---------ZAT18              --------->ANAC58 --------->ANAC46                <---------ANAC58 <-----------GT1                    <---------LBD16  --------->LBD16      <---------YAB1   <---------O2     --------->ZAT18             --------->LBD16  <---------LBD16 ------LBD16    <---------ANAC58<---------YAB1             <-------MYC3     <---------TOE2(3) ----AGP1 --------->AHL20(2)  --------->YAB1               ------->MYC3    --------->YAB1 <------ZmHOX2a(2)   ctgggtttgtgataaaatgcttgccacgtggattataactagtggcctactcaagaacacacatgtattccacggattaatgatatccacggatcaaatc  23248000                                      ------->TEIL                                --------->MYB52(1)                                   --------->YAB1                                <-----------GT1                          <---------AHL20(2)                               ----------->HVH21                     <---------RVE1(1)                      <---------ARR14(2)    --------->ARR14(2)       <---------CCA1(1)          --------->AHL20(2) <---------At4g35610                    --------->ARR11(3)          <---------AHL20(2) --------->At4g35610  <----------DOF2   <---------ARR11(3)    --------->bZIP60(1)    --------->ANAC58  --------->ARR14(2)    <---------ARR14(2)      <---------ARR14(2)    <---------bZIP60(1)    --------->ANAC58  <---------MYB52(1)   <---------CCA1(2)  --------->YAB1        --------->ICU4 ----------->HVH21   <---------MYB52(1) <---------MYB59   <---------AHL20(2)      ---------->DOF2 ----------->TGA1   ----------->GT1 --------->LBD16       --------->AHL20(2)   ----------->GT1   ggtctgacgaaattaatcgaaccggttattcatctaaccggacctaaatctgcttttggtttaattagaagatattttaagtagtaaagatgatatcatc  23248100                        <---------YAB1                                     --------->YAB1              ----------->GT1                                           <----------DOF2             --------->DAG2               --------->ANAC55(2)--------->ARR11(3)                   ---           ---------->DOF2                --------->ANAC46   <---------ARR11(3)                   ---   tcataagaaaattgaaaggtgaatttataaatattgttatgttcacataatatccaaaaacaatatctattgaacttttataaaacataaacgtattaaa  23248200           --------->ARR11(3)           <---------ARR11(3)           <-----------ARR10                                  <---------AHL20(2)           <---------ARR14(2)                                 --------->AHL20(2)           --------->ARR14(2)                                <---------YAB1   <---------ARR11(3)                                      --------->YAB1   --------->ARR11(3)                                     <---------YAB1  --------->YAB1                                          --------->ICU4 <---------YAB1                      ----------->GT1 ----------->GT1                 <------ZmHOX2a(1) ------>TOE2(2)        <---------AHL20(2)          ------->MYC3              <---------YAB1---------- ------>TOE1(2)    <----------DOF2--------->ALFIN1 <-------MYC3---------->DOF2     <---------TOE2(3)   cctatgatattagtatcttctcttttttattcaagagaggggaaacaaaaacacatggttataattaaagtctaaaaccatgaataaggaaggaagaaaa  23248300                                                                         --------->YAB1                                                                        <---------YAB1                                                                      <---------ICU4                                                                     --------->ICU4               <<<                                                                     <---------YAB1          ========                                                                   <--------HAHB4            ------>ZmHOX2a(2)                                                                   <---------ICU4           =========                                                                   --------->YAB1          <---------ARR11(3)                                                                  <---------YAB1           <---------ARR14(2)                                                                  --------->ICU4           --------->ARR11(3)                                                                --------->YAB1             --------->ARR14(2)              <------ZmHOX2a(1)                                 <---------ICU4             <---------    <------ZmHOX2a(1)                   --------->TOE1(3)      <---------YAB1              <---------ARR14(3)  --------->LBD16                       --------->TOE2(3)    <---------ICU4                --------->ARR14(3) <---------LBD16             ----------->GT1                 --------->YAB1               <------ZmHOX2a(1) <-----------RAV1(2)        --------->ANAC46             <---------AHL20(2)           ---------->DOF2 ->GT1  <---------ZAT14  <-------TEIL<-----------GT1    --------->AHL20(2) <---------CCA1(2)<------ZmHOX2a(2)   accccaggagtttagaggaacttaacatacacagaaaaaaaaccttattctcttgttataaaatcatcatcattatcatctcttaaacaaaaggatcttc  23248400  Previous    Next  AGI:  At5g57345.1    Description:  similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96592.1) Range:  from: 23246633    to: 23247864    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g57350.1    Description:  AHA3 (Arabidopsis H(+)-ATPase 3); ATPase. Identical to ATPase 3, plasma membrane-type (AHA3) [Arabidopsis Thaliana] (GB:P20431); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to AHA1 (ARABIDOPSIS H+ ATPASE 1), ATPase [Arabidopsis thaliana] (TAIR:AT2G18960.1); similar to AHA9 (Arabidopsis H(+)-ATPase 9), hydrogen-exporting ATPase, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G80660.1); similar to Plasma membrane ATPase 4 (Proton pump 4) (GB:Q03194); similar to plasma membrane H+-ATPase [Lycopersicon esculentum] (GB:AAB17186.1); similar to H(+)-transporting ATPase [Solanum t Range:  from: 23248105    to: 23253798    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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