Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          -------->ATHB1                                                                        <--------HAHB4                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        <---------ICU4                                                     <---------YAB1     --------->ATHB51                                          <---------HSFB2a(2)          <---------ATHB12                --------->ATHB12          --------->HSFB2a(2)          <---------ATHB51                <---------ICU4        ------>ZmHOX2a(2)           --------->ANAC46               <---------YAB1       --------->ARR11(3)         ------->GAMYB     --------->AHL20(1)             <---------ARR11(3) <---------AHL20(2)     <---------AHL20(2)        ==============HOX2a_HOX2a      <---------ALFIN1     <---------AHL20(1)        ------>ZmHOX2a(1)    --------->AHL20(2) --------->ICU4     --------->AHL20(2)    --------->ARR14(2)   <---------AHL20(2)--------->ANAC58  <---------AHL20(2)       <---------ARR14(2)  --------->AHL20(2) --------->ANAC58   <---------ALFIN1   gtattattttattgttcatcatttgtccaaatcctcttgatcttctcgatttaatattatatcaacacacccaattatttcaaacccccacttatatgta  23242900                          <-----------ARR10                          --------->GLK1(2)                          --------->ARR11(3)                          --------->ANAC55(2)                --------->AHL20(2)              <---------GLK1(2)     --------->ANAC55(1)           -             --------->YAB1                    <------ZmHOX2a(1)      <---------ANAC55(2)           <             --------->ANAC46                <---------TOE2(3)      --------->ZAT6                  <             --------->ANAC55(2)   <---------HSFB2a(2)       <---------YAB1                      <---         --------->AHL20(2)        --------->HSFB2a(2)    <---------AHL20(2) <---------ANAC55(2) ----      --------->YAB1      <---------ARR11(3) <---------TOE2(2)--------->ZAT6 ----------->GT1   ------   taaaccaaaaattatacataatatacaaaatctacttccataagacttaggattctatattttatcagtaacacttaatatgtaaattcttgaacatatt  23243000                                                <----------DOF2                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------ARR11(3)                            <---------AHL20(2)                                             <---------ARR14(3)                        --------->ATHB12                                             --------->AGP1                            <---------ICU4                                             --------->ARR14(2)                       <---------ATHB12                                             --------->ARR11(3)                       --------->ICU4         <----------DOF2                     <-----------ARR10                        <---------YAB1     --------->WOX13(1)                      --------->ARR14(3)                      <---------TOE2(3) -------->AHL20(1)                           <---------ARR14(2)                     --------->YAB1 ---------AHL20(2)                         ----------->ARR10                      <---------AHL20(2) ---------AHL20(1)                   <---------ARR11(3)                          --------->YAB1 ------AHL20(2)                      --------->ARR11(3) <-----------GT1       --------->YAB1 ----->AHL20(2)                ----------->GT1<---------RVE1(1)               --------->AHL20(2) --->AHL20(2)       --------->ZAT6 ----------->ARR10 <----------DOF2          <---------AHL20(2)   aatatatcaatcttttgagttaatactacagcatggtaagatactaagatcttttcttttactatttcatatagtggcatttatattaatgatttttttt  23243100                                                      <---------ANAC55(2)                                                 <---------ICU4                                                --------->AHL20(1)                                                <---------AHL20(1)                --------->AHL20(2)                                                <---------AHL20(2)           --------->AHL20(2)                                                --------->AHL20(2)      --------->ANAC58                                             <---------AHL20(2)  <---------ARR14(2)--------->AHL20(2)                                  --------->ANAC58    --------->ANAC55(2) --------->YAB1                                  --------->ANAC58  <-----------GT1     --------->ANAC58                      ---------->DOF2    ----------->GT1    ----------->GT1  <---------AHL20(2)         <---------DAG2   <------ZmHOX2a(1)  --------->AHL20(2)  --------->ARR14(2)<---------AHL20(2)   taaaaacatcaccttctcagagaataaaggactctcaagtaagagattaaaatattacatactagtaaatccacaagaattatataaaattagctattgt  23243200                                                                                  ------>NtERF2                                                                            <---------ANAC58                                                                            <---------ANAC58                    ------------>CBF            <-----------GT1       <----------DOF2        <-------GAMYB                 ---------->DOF2                 <---------DAG2 ------>ZmHOX2a(1)       <---------MYB46(3)          --------->AtLEC2                 <---------At4g35610             <   tttgtctgtctgttagagagagaacaattagatggacatacaaagctaatttagcatatgaaaacctctcagctttttccttgcctccttccttcacaaa  23243300                                                                                              -------                                                                                              -------                                                                                           ------>ZmHOX2a(1)                                                                                          --------->TOE2(3)                                                                                      --------->GLK1(1)                                                                <---------YAB1      <---------ICU4                                                  <---------AHL20(1)             <-----------GT1 ----            --------->ICU4         <-----------GT1--------->AHL20(2)       --------->AHL20(2) <------            *TSS                  <---------AHL20(2) <---------AHL20(2)    <---------AHL20(2) <------          <<<<<<<<<WRKY18         <-----------GT1 <---------ARR11(3)   <----------DOF2<---------GLK1(1) -----------GT1      <----------DOF2              --------->AHL20(1)   ------>ZmHOX2a(1)  --------->TOE1(3)   tatcacagcctgtcaaaattagcctttaagaactatttaacttccatcactatatattatttgtttattaatcctttttaatttaagcatttccttagct  23243400    --------->ANAC46 --------->ARR14(2) <---------ARR14(2) -->ZAT2                                                                                   <---------MYB46(3) -->At4g35610                                                                    ------>ZmHOX2a(1) ----->At5g28300                 <----------DOF2                         <----------DOF2  <---------WOX13(1) ---At4g35610               <----------DOF2   <---------ARR11(3)   <---------ALFIN1      >>>>>>>>>ARR2 ---ZAT2               ------>ZmHOX2a(1)      --------->ARR11(3)   --------->ANAC46    <---------AHL20(2)   gtgaataccccattatccctctctccttctctttcctttctctctgaatatctctctatctcttcttccacacagctttagtcctatatttgattgttga  23243500                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                       <----------DOF2                           --------->ALFIN1                        <---------At4g35610                                <--------P            --------->YAB1          <---------YAB1      ---------->DOF2 <---------TOE2(3)   ---------->DOF2      --------->At4g35610          ----------->GT1    --------->MYB59   caaaacaaagcctatagtaatctctcagctattggattatgctttgaagctaaattggtaaagaagcatatagtaaggtaagtgtgcgtcttgaagaatt  23243600                                                                                              -------                                                                                       --------->ANAC55(2)                                                                                       ----------->GT1                         <---------ZAT14                                              <---------TOE1(3)                    --------->ICU4                                                    <---------TOE2(3)                  <---------ANAC46                                       <---------ALFIN1     <------                  <---------ANAC58      --------->WOX13(1)            <---------WRKY18(1)    <-------                  <---------ANAC58    <---------YAB1              --------->ZAT2     <-----------RAV1(2)             <-----------RAV1(1)--------->TOE1(2) <----------DOF2 <---------ZAT2 <----------DOF2   tctcttaagtgagttttgtggcatgagtatagaacatgtgatcaatgagcttctttggagaaaatcacagcttgaccactcttcttttcaggtaatttat  23243700                                                        <-----------RAV1(1)                                                       <---------ANAC58                                                       <---------ANAC58                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                               --------->LBD16                                              <---------ANAC46                                              <---------HSFB2a(2)                                             <---------LBD16                        <-----------GT1                                           --------->ARR14(2)                  <---------ARR11(3)                                           --------->GLK1(2)                   <---------AHL20(1)       <----------DOF2                     <---------ARR14(2)                  --------->AHL20(1) <---------GLK1(2)              ----------------->AGL2 <---------ANAC46        --------->ARR11(3) -->AHL20(2)       <---------ANAC58       <---------GLK1(2)   <----------DOF2 --------->CCA1(2) ---AHL20(2)       <---------ANAC46       <---------ARR14(2) <---------ANAC58<---------ARR11(3) --AHL20(2)        <---------ANAC58       --------->ARR14(2) <---------ANAC58--------->ARR11(3) -----   atagaatttctttatatgtattcgtgtatatatgtccataaacagattccggatattgctggtgctttctatttagatagatatattttctatatatgta  23243800  Previous    Next  AGI:  At5g57340.1    Description:  similar to hypothetical protein MtrDRAFT_AC155282g59v2 [Medicago truncatula] (GB:ABN08100.1) Range:  from: 23243312    to: 23246508    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version