Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->DOF5.7(1)                                                                --------->ANAC58                                                                --------->ANAC58                                                                --------->ANAC46                                     ------>ZmHOX2a(2)     <---------At4g35610                             <---------YAB1        <---------ANAC58    --------->ANAC46                           <---------ZAT6          <---------ANAC58    --------->ANAC58                     <---------TOE2(3)<----------DOF2      --------->At4g35610      <---------YAB5   <---------KAN1    >>>>>>>>>MYB98<---------ARR11(3)      --------->ZAT2   --------->DOF5.7(1)    <- -->ANAC58          <-----------GT1<---------RVE1(2)<----------DOF2    --------->ANAC58      -------- -->ANAC58       --------->WOX13(2)--------->ARR11(3)      <---------ZAT2 ---------->DOF2   ---------   aaggagtatcgctagacctatttaacatagtcttattgatctttgtttctattgcttttgcagctcaagaaacacacaaagagggcatcatacatttatt  23235000                                     --------->AHL12(1)                                     --------->AHL25(2)               <---------ICU4                                     <---------AHL25(2)               --------->YAB1                                     <---------AHL25(3)              --------->ICU4                                     <---------AHL12(1)              <---------YAB5                                     <---------AHL25(1)              <---------YAB1                                     --------->AHL20(2)             --------->AHL20(3)                                     --------->AHL20(1)             --------->WOX13(2)                                 --------->AHL20(2)                 <---------AHL20(3)                                 <---------AHL25(3)                 <---------WOX13(2)                     --------->YAB1 --------->AHL12(3)             --------->YAB1                    <---------AHL20(2)                            --------->AHL25(1)                    --------->AHL12(1)                            <---------AHL20(3)                    <---------AHL12(1)                            <---------AHL12(3)                   <---------AHL12(2)<---------AHL20(2)           <---------AHL25(1)                  <---------AHL12(2)<---------AHL12(1)            --------->AHL20(2)                 --------->AHL20(2) --------->AHL12(1)            <---------AHL20(2)                -                 <---------AHL25(3) <---------AHL25(2)            --------->AHL12(3)               --                --------->AHL25(3)  <---------AHL12(3)            --------->AHL20(3)               <-                --------->AHL20(2) <---------AHL12(2)             <---------AHL12(1)              ---                <---------AHL25(1) --------->AHL12(2)             --------->AHL12(1)              <--    <---------ZAT2--------->AHL12(2)--------->AHL25(3)        --------->AHL20(2)                 ----    --------->At4g35610          --------->AHL25(3)         <----------DOF2  --------->KAN1      <---    <---------At4g35610   --------->ANAC58                 <---------DOF5.7(1)                  <---- ---------DOF2  <---------AHL20(2)--------->AHL12(2)  <---------GLK1(2)  <-----------GT1       ------ ->KAN1--------->At4g35610--------->ANAC58       --------->YAB1   <---------YAB1              <------ >AHL25(3)      --------->AHL25(1)--------->AHL12(3) --------->KAN1--------->YAB5     --------->GLK1(2)   cctttgagctgcttacaaataaataatcaagcacataaattttttgaaaaatcatatattctctttatataattataacatattcaagtttctgttttga  23235100        <---------AHL20(3)       --------->AHL12(1)      <---------RVE1(1)    <------ZmHOX2a(1)    ==================================HOX2a_HOX2a --------->YAB1 -------->ICU4 ------->WOX13(2) --------WOX13(2) ------>YAB5                            <---------KAN1                                          <---- -------ICU4                       --------->ANAC55(2)             ----------->RAV1(2)     <---------ANAC58 ----->ICU4                    ------>ZmHOX2a(2)                <----------DOF2            <---------ANAC46 ------YAB1                  <---------ARR11(3)             <----------DOF2                <---------ANAC58 -----RVE1(2)                --------->ARR11(3)          --------->GLK1(2)      --------->GLK1(2)  <- --->YAB1                  <---------YAB5               <---------GLK1(2)     --------->KAN1<-------- ---YAB1<---------AHL20(2) <---------YAB1              --------->KAN1------>ZmHOX2a(1)  <---------WOX13(1)   taattaggatttttttgtttgtttgttttatgatctcacataatatgtctggctgtaagattctttctttcctggccttgaaattctctaattgctttta  23235200                                    <---------YAB5                        <---------ARR11(3)                        <---------GATA12                        --------->ARR11(3)                        --------->GATA12                      <---------AHL20(2)                      <---------AHL25(3)                     --------->AHL25(2)                     <---------AHL25(1)                     --------->AHL25(1)                     --------->AHL20(2)                     <---------AHL20(2)                     --------->AHL12(3)          --------->KAN1                     <---------AHL12(3)         <---------AHL20(2)                     --------->AHL25(3)         <---------YAB1                     <---------AHL25(3)         --------->AHL12(3)                   <---------WOX13(2)           --------->AHL20(3)          --------->MYB46(3)<---------CCA1(2)   <---------AHL20(3)    <---------ICU4 -----TOE2(3) ----------->GT1   <----------DOF2 <---------AHL25(1)    --------->YAB1   <---------DAG2 --------AHL20(2)  --------->WOX13(2)--------->YAB1         --------->ETT(2)     --------->TOE2(3)  - --DOF2  >>>>>>>>>>>>>>>>>LFY <---------YAB1  --------->AHL12(2)     <---------YAB5    <----------DOF2   tgttattgaagaaccaatgtaaattaaatcttatctttatcatgtgttatattattctatggtcgtcagtaatcttcactaatccataactttatttctc  23235300                             --------->AHL20(2)                                                  ----                             <---------AHL20(2)                                            --------->GLK1(2)         --------->YAB1    <---------WOX13(2)                                              --------->ARR11(3)        <---------YAB1  <---------YAB5                                                     --------->RVE1(2)    <----------DOF2     ---------->ID1                                            --------->AtMYB61<-    <---------DAG2<---------DAG2            ----------->GT1             --------->YAB1     <---------GATA12 <-----------GT1  <----------DOF2     <-----------HVH21                <---------YAB1      <---------ARR11(3) --------->ID1 <-----------GT1 ---------->DOF2                      <---------AHL12(1)     --------->GATA12   ttgtcactttatgatataaactttttgtcatttaaaagtctgtcagaggtaaaaacaaaaacaaaaacaaaaaatcatagtaaaccaaaacaaaatctag  23235400                                                                         <---------DOF5.7(1)                                                                      -------->P                                                                   <---------At4g35610                                                                   --------->At4g35610                                                                --------->At4g35610                                                         --------->DOF5.7(1)                                         --------->RAP2.6(3)    <---------ZAT2                  -----                                        --------->DOF5.7(1)     <---------At4g35610    <---------ANAC46                                        --------->MYB52(1) --------->DOF5.7(1)         <---------AtLEC2                                        *TSS             --------->DAG2 <---------DOF5.7(1)     <----                              <---------ARR11(2)        --------->DOF5.7(1)            <---------ANAC58                              --------->ARR11(2)       --------->DOF5.7(1)<---------DOF5.7(1)   -----      --------->MYB52(1)--------->ARR11(2) ----------->GT1--------->DAG2<---------DAG2 <---------ANAC58 ----->YAB1             <---------ARR14(2)<----------ID1---------->DOF2 --------->TOE2(3)----------->HVH21 --------KAN1     --------->DOF5.7(1)  --------->DOF5.7(1)--------->DOF5.7(1)<-----------GT1   ------   aataaacaaaacggagtcgtaagagagaaccggttcgaacaaaaacggcaaaaaaaaaaaaaggggagcagcaacctttttccaattttgcgtgaagcag  23235500                                                                              <---------RVE1(2)                                                                              <---------ARR11(2)                                                                              <---------ARR14(2)                                                                              --------->ARR11(2)                                                                        --------->ARR14(2)            ----------->GT1                                            <------ZmHOX2a(1)            <----------ID1                                           <---------TOE1(2)           ----------->GT1                                       <---------KAN1<------ZmHOX2a(2)           ------------------------>ANAC81                      <-----------ARR10         ---------->DOF2                                        --------->GLK1(2)         --------->DOF5.7(1)                                    <---------GATA12                    <        --------->DOF5.7(1)                                     --------->RVE1(2)                <---   ----------->GT1                                             <---------GLK1(2)  ------>ZmHOX2a(1) < --------->ZAT14                                           --------->LBD16    --------->GATA12  <---- <---------ZAT14   --------->DOF5.7(1)                    --------->ANAC46    <---------GATA12  <---- ---->ZAT2--------->DOF5.7(1)                            <---------LBD16<---------ARR14(2)      <---- -----At4g35610    --------->DAG2                      --------->ARR11(2)--------->GLK1(1)      <---- ---->At4g35610   ---------->DOF2                     --------->CCA1(2)===============HOX2a_HOX2a---- ----->RAV1(1)    --------->DOF5.7(1)--------->YAB5   --------->KAN1<---------LBD16           <------   cagtgaagaaaaaaaggaaaaaaagtgagtgagagaagaagattagaaacgacgatatatacggagaatctcaggatttcgatcctgtttttgttttttc  23235600                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                               ------                                                                                              -------                                                                                             <-------                                                                                      <---------KAN1                                                                                 ------>NtERF2-------                                                                                 --------->LBD16-----                                                                                --------->ANAC46<---- ---------DAG2                 <---------YAB1                                  <---------LBD16<------ ------------AGL15             <---------YAB5                             --------->KAN4(2)  ------>NtERF2 ----------DOF2      <---------DEAR3(1)                                  ------>ZmHOX2a(2)   <------NtERF2 -------------AGL3  --------->ATERF1(1)  <---------ANAC58               <------ZmHOX2a(2)    -------- -------------AGL2  <------NtERF2        <---------ANAC58              <---------ARR11(3)    -------- -------------AG   ------>NtERF2<---------ICU4                         --------->GATA12      <------- -------------AGL1--------->ETT(2)      <---------At4g35610            --------->ARR11(3)   <-------- ----------->AGL15<---------DEAR3(1)   <---------RVE1(2)             --------->DOF5.7(1)    --------- -----GT1    <---------AtLEC2  --------->ICU4  ---------->DOF2--------------------->WRI1  <---------LBD16   tacttttggtactctccatggcgacggagcgtcatcattttgagcttgctaaaggcatcaatggccttgataagatcgttctccgcgagtctcgcggccg  23235700                          <---------ANAC58                          <---------ANAC58                          <---------ANAC46                         --------->ALFIN1                         --------->ATERF1(1)      ----------->GT1    <------NtERF2 --------->ZAT14        ------>NtERF2 --------->At4g35610   <---------ANAC46 <---------ZAT14       --------->DEAR3(1) <---------At4g35610   <---------DEAR3(1) ----->ARR14(2)       --------->ATERF1(1) ------ARR14(2)       <------NtERF2 -----At4g35610       --------->RAP2.3(1) -----RAP2.6(3)       ------>NtERF2 --->RAP2.6(2)       <---------ATERF1(1) -->SPL7(1)         <---------DEAR3(1)                    --------->GATA12 --DREB2C(1)       <---------LBD16                  <---------GATA12 -->ATERF1(1)     --------->ANAC46                  --------->GATA12       <------ZmHOX2a(2) ---->At4g35610   --------->O2                 ------>ZmHOX2a(2)          <---------GATA12 --NtERF2         <---------O2                --------->At4g35610   <---------WOX13(1) ---DEAR3(1)     <---------LBD16             <---------GATA12      <---------RVE1(2)              --- ->ATERF1(1)    <-----------GT1              <---------AGP1<------ZmHOX2a(2)                    <---- ->DREB2C(1)<---------AHL12(1)      --------->ZAT6  <---------RVE1(2)     --------->GATA12 --------->YAB1 --ATERF1(1)--------->AHL12(1) <----------DOF2<---------At4g35610 --------->ATHB12         --------->YAB5 -ATERF1(1)<---------AHL12(2)--------->ZAT18 <---------RVE1(2)   <---------YAB1            --------->ATHB12 >DEAR3(1) --------->AHL12(2)<---------ZAT18 --------->GATA12    <---------AHL20(2)       <---------YAB1   ctctgcagaggtaaattttcacgcggcgtcgtgctctatctctagttgatctgagatttagatcaatttgattggagatcgatttttgtagtatgattac  23235800                                                                                             <-------                                                                                             <-------                                                                                          ------>ZmHOX2a(2)                                                                                         <---------KAN1                                                                                         --------->KAN1                                                                                         --------->GLK1(1)                                                                                         <---------GLK1(1)                                                                                         --------->At4g35610                                                                                         <------ZmHOX2a(2)                                                                                         <---------At4g35610                                                                                        --------->ARR11(2)                                                                                        <---------ARR11(2)                                                                                        <---------GATA12                 ------>ZmHOX2a(2)                                                      --------->GATA12                <------ZmHOX2a(2)                                                       <---------ARR14(2)               --------->ARR11(2)                                                       <-----------ARR10               <---------ARR14(2)                                                       --------->ARR14(2)               <---------GATA12                                                         <---------RVE1(2)               --------->AGP1                                                           --------->RVE1(2)               --------->GATA12                                                         <---------AGP1               --------->ARR14(2)                                                       <---------ARR11(3)               <---------RVE1(2)                                                       <---------ARR14(1)               <---------ARR11(3)                                                      <---------CCA1(2)      <---------ARR14(2)                                                              --------->LBD16      <---------GATA12                                                             --------->MYB52(1)      --------->ARR14(2)                                                          --------->ARR14(2)      --------->GATA12                                                            <---------ARR11(2)      --------->RVE1(2)                                                           --------->ARR11(2)     <---------CCA1(2)        --------->ZAT6                                      <---------ARR14(2) ------>GATA12 --------->ARR11(3)     <---------YAB1                       <---------WOX13(2)<------- -----YAB1     <---------ARR11(2)   <---------ZAT6                    <---------ZAT6<---------LBD16<-   gatttgcaaatctcttagatccttgggttttagctctagtgttattgagttctgtatttgtttatgcaatttgtgttaatggaagaaccggatctgcgtg  23235900  Previous    Next  AGI:  At5g57330.1    Description:  aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43213.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718) Range:  from: 23235440    to: 23238315    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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