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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<----------
DOF2
--------->
ANAC46
------>
ZmHOX2a(2)
--------->
At4g35610
<---------
YAB1
<---------
ANAC58
--------->
ANAC58
<---------
ZAT6
<---------
ANAC58
--------->
ANAC58
<---------
TOE2(3)
<----------
DOF2
<---------
ZAT2
-->
ANAC58
>>>>>>>>>
MYB98
<---------
ARR11(3)
<---------
At4g35610
-->
ANAC58
<-----------
GT1
--------->
ARR11(3)
--------->
ZAT2
---------->
DOF2
<-
aaggagtatcgctagacctatttaacatagtcttattgatctttgtttctattgcttttgcagctcaagaaacacacaaagagggcatcatacatttatt
23235000
--------->
YAB1
<---------
ICU4
--------->
ICU4
--------->
YAB1
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
-
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
<--
--------->
At4g35610
--------->
AHL20(2)
--------->
AHL20(2)
----
--------->
At4g35610
--------->
ANAC58
--------->
AHL20(2)
<---
<---------
At4g35610
--------->
ANAC58
<---------
GLK1(2)
<-----------
GT1
------
<---------
ZAT2
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<------
---------
DOF2
<---------
AHL20(2)
--------->
AHL20(1)
<----------
DOF2
--------->
GLK1(2)
cctttgagctgcttacaaataaataatcaagcacataaattttttgaaaaatcatatattctctttatataattataacatattcaagtttctgttttga
23235100
<---------
RVE1(1)
==================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
--------->
YAB1
<----
-------->
ICU4
------>
ZmHOX2a(1)
<--------
-------
ICU4
--------->
ANAC55(2)
----------->
RAV1(2)
<---------
ANAC46
----->
ICU4
------>
ZmHOX2a(2)
<----------
DOF2
<---------
ANAC58
------
YAB1
<---------
ARR11(3)
<----------
DOF2
<---------
ANAC58
--->
YAB1
--------->
ARR11(3)
--------->
GLK1(2)
<---------
WOX13(1)
---
YAB1
<---------
AHL20(2)
<---------
YAB1
<---------
GLK1(2)
--------->
GLK1(2)
<-
taattaggatttttttgtttgtttgttttatgatctcacataatatgtctggctgtaagattctttctttcctggccttgaaattctctaattgctttta
23235200
--------->
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
MYB46(3)
<---------
CCA1(2)
-----
TOE2(3)
----------->
GT1
<----------
DOF2
--------->
ETT(2)
--------->
TOE2(3)
-
--
DOF2
>>>>>>>>>>>>>>>>>
LFY
<---------
YAB1
<---------
YAB1
<---------
ICU4
<---------
DAG2
--------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
<----------
DOF2
tgttattgaagaaccaatgtaaattaaatcttatctttatcatgtgttatattattctatggtcgtcagtaatcttcactaatccataactttatttctc
23235300
--------->
YAB1
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
----
<---------
DAG2
<---------
DAG2
--------->
GLK1(2)
<----------
DOF2
---------->
ID1
----------->
GT1
--------->
AtMYB61
<-----------
GT1
<----------
DOF2
<-----------
HVH21
--------->
YAB1
<---------
ARR11(3)
--------->
ID1
<-----------
GT1
---------->
DOF2
<---------
YAB1
--------->
ARR11(3)
ttgtcactttatgatataaactttttgtcatttaaaagtctgtcagaggtaaaaacaaaaacaaaaacaaaaaatcatagtaaaccaaaacaaaatctag
23235400
-------->
P
-----
--------->
At4g35610
-----
<---------
At4g35610
<----
--------->
At4g35610
<---------
ANAC58
----------->
GT1
<---------
At4g35610
<---------
ANAC58
--------->
RAP2.6(3)
<---------
ZAT2
<---------
AtLEC2
--------->
MYB52(1)
--------->
DAG2
<-----------
GT1
------
--------->
MYB52(1)
*
TSS
--------->
DAG2
--------->
TOE2(3)
----------->
HVH21
----->
YAB1
<---------
ARR14(2)
<----------
ID1
---------->
DOF2
<---------
DAG2
<---------
ANAC46
aataaacaaaacggagtcgtaagagagaaccggttcgaa
caaaaacggcaaaaaaaaaaaaaggggagcagcaacctttttccaattttgcgtgaagcag
23235500
--------->
GLK1(1)
<----------
ID1
<---------
ARR14(2)
----------->
GT1
<------
ZmHOX2a(1)
----------->
GT1
<---------
TOE1(2)
<
---------->
DOF2
<---------
LBD16
<---
----------->
GT1
--------->
GLK1(2)
<----
--------->
ZAT14
<-----------
ARR10
<----
<---------
ZAT14
<---------
GLK1(2)
------>
ZmHOX2a(1)
<
---->
ZAT2
------------------------>
ANAC81
--------->
LBD16
<------
ZmHOX2a(2)
<----
---->
At4g35610
--------->
ANAC46
<---------
ARR14(2)
<----
-----
At4g35610
--------->
DAG2
<---------
LBD16
--------->
ARR14(2)
<------
----->
RAV1(1)
---------->
DOF2
--------->
CCA1(2)
===============
HOX2a_HOX2a
----
cagtgaagaaaaaaaggaaaaaaagtgagtgagagaagaagattagaaacgacgatatatacggagaatctcaggatttcgatcctgtttttgttttttc
23235600
----
<---
<----
-----
------
-------
<-------
--------
<------
NtERF2
--------->
LBD16
<----
----------
DOF2
------>
NtERF2
-------
------------
AGL15
--------->
ICU4
--------->
ANAC46
<----
-------------
AGL2
<---------
DEAR3(1)
<---------
LBD16
<------
-------------
AGL3
--------->
ATERF1(1)
--------->
KAN4(2)
--------
---------
DAG2
<------
NtERF2
<---------
ANAC58
------>
ZmHOX2a(2)
------>
NtERF2
-------------
AG
------>
NtERF2
<---------
ICU4
<------
ZmHOX2a(2)
<-------
-------------
AGL1
--------->
ETT(2)
<---------
ANAC58
--------->
ARR11(3)
---------
-----
GT1
<---------
AtLEC2
<---------
YAB1
---------->
DOF2
<---------
ARR11(3)
<--------
----------->
AGL15
<---------
DEAR3(1)
<---------
At4g35610
--------------------->
WRI1
<---------
LBD16
tacttttggtactctcc
atggcgacggagcgtcatcattttgagcttgctaaaggcatcaatggccttgataagatcgttctccgcgagtctcgcggccg
23235700
--------->
ZAT18
<---------
ZAT18
<---------
ANAC46
----------->
GT1
<---------
ANAC58
--------->
ZAT14
<---------
ANAC58
--------->
At4g35610
--------->
ALFIN1
<---------
At4g35610
<------
NtERF2
<---------
ZAT14
--------->
ATERF1(1)
----->
ARR14(2)
------>
NtERF2
------
ARR14(2)
--------->
DEAR3(1)
-----
At4g35610
<---------
DEAR3(1)
---->
At4g35610
<---------
ANAC46
--->
RAP2.6(2)
------>
NtERF2
-->
ATERF1(1)
--------->
ATERF1(1)
--
ATERF1(1)
--------->
RAP2.3(1)
->
ATERF1(1)
<------
NtERF2
-----
RAP2.6(3)
<---------
ATERF1(1)
-->
SPL7
<---------
DEAR3(1)
--
NtERF2
<---------
LBD16
<------
ZmHOX2a(2)
---
DEAR3(1)
<---------
O2
------>
ZmHOX2a(2)
<---------
WOX13(1)
->
DREB2C(1)
--------->
ANAC46
--------->
At4g35610
--------->
ATHB12
<----
--
DREB2C(1)
--------->
O2
<---------
AGP1
<---------
AHL20(2)
--------->
ATHB12
>
DEAR3(1)
<---------
LBD16
--------->
ZAT6
<------
ZmHOX2a(2)
--------->
YAB1
-
ATERF1(1)
<-----------
GT1
<----------
DOF2
<---------
At4g35610
<---------
YAB1
<---------
YAB1
ctctgcagag
gtaaattttcacgcggcgtcgtgctctatctctagttgatctgagatttagatcaatttgattggagatcgatttttgtagtatgattac
23235800
<-------
<-------
<-------
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
At4g35610
<---------
GLK1(1)
--------->
GLK1(1)
<-----------
ARR10
<---------
ARR11(3)
------>
ZmHOX2a(2)
<---------
AGP1
<------
ZmHOX2a(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
AGP1
<---------
ARR14(1)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
ARR11(3)
--------->
LBD16
--------->
ARR14(2)
--------->
MYB52(1)
<---------
ARR14(2)
<---------
YAB1
--------->
ARR14(2)
<---------
CCA1(2)
--------->
ZAT6
<---------
ARR14(2)
-----
YAB1
--------->
ARR11(3)
<---------
ZAT6
<---------
ZAT6
<---------
LBD16
<-
gatttgcaaatctcttagatccttgggttttagctctagtgttattgagttctgtatttgtttatgcaatttgtgttaatggaagaaccggatctgcgtg
23235900
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AGI:
At5g57330.1
Description:
aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43213.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718)
Range:
from: 23235440
to: 23238315
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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