Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
DOF5.7(1)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
------>
ZmHOX2a(2)
<---------
At4g35610
<---------
YAB1
<---------
ANAC58
--------->
ANAC46
<---------
ZAT6
<---------
ANAC58
--------->
ANAC58
<---------
TOE2(3)
<----------
DOF2
--------->
At4g35610
<---------
YAB5
<---------
KAN1
>>>>>>>>>
MYB98
<---------
ARR11(3)
--------->
ZAT2
--------->
DOF5.7(1)
<-
-->
ANAC58
<-----------
GT1
<---------
RVE1(2)
<----------
DOF2
--------->
ANAC58
--------
-->
ANAC58
--------->
WOX13(2)
--------->
ARR11(3)
<---------
ZAT2
---------->
DOF2
---------
aaggagtatcgctagacctatttaacatagtcttattgatctttgtttctattgcttttgcagctcaagaaacacacaaagagggcatcatacatttatt
23235000
--------->
AHL12(1)
--------->
AHL25(2)
<---------
ICU4
<---------
AHL25(2)
--------->
YAB1
<---------
AHL25(3)
--------->
ICU4
<---------
AHL12(1)
<---------
YAB5
<---------
AHL25(1)
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(3)
--------->
AHL20(1)
--------->
WOX13(2)
--------->
AHL20(2)
<---------
AHL20(3)
<---------
AHL25(3)
<---------
WOX13(2)
--------->
YAB1
--------->
AHL12(3)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL25(1)
--------->
AHL12(1)
<---------
AHL20(3)
<---------
AHL12(1)
<---------
AHL12(3)
<---------
AHL12(2)
<---------
AHL20(2)
<---------
AHL25(1)
<---------
AHL12(2)
<---------
AHL12(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL12(1)
<---------
AHL20(2)
-
<---------
AHL25(3)
<---------
AHL25(2)
--------->
AHL12(3)
--
--------->
AHL25(3)
<---------
AHL12(3)
--------->
AHL20(3)
<-
--------->
AHL20(2)
<---------
AHL12(2)
<---------
AHL12(1)
---
<---------
AHL25(1)
--------->
AHL12(2)
--------->
AHL12(1)
<--
<---------
ZAT2
--------->
AHL12(2)
--------->
AHL25(3)
--------->
AHL20(2)
----
--------->
At4g35610
--------->
AHL25(3)
<----------
DOF2
--------->
KAN1
<---
<---------
At4g35610
--------->
ANAC58
<---------
DOF5.7(1)
<----
---------
DOF2
<---------
AHL20(2)
--------->
AHL12(2)
<---------
GLK1(2)
<-----------
GT1
------
->
KAN1
--------->
At4g35610
--------->
ANAC58
--------->
YAB1
<---------
YAB1
<------
>
AHL25(3)
--------->
AHL25(1)
--------->
AHL12(3)
--------->
KAN1
--------->
YAB5
--------->
GLK1(2)
cctttgagctgcttacaaataaataatcaagcacataaattttttgaaaaatcatatattctctttatataattataacatattcaagtttctgttttga
23235100
<---------
AHL20(3)
--------->
AHL12(1)
<---------
RVE1(1)
<------
ZmHOX2a(1)
==================================
HOX2a_HOX2a
--------->
YAB1
-------->
ICU4
------->
WOX13(2)
--------
WOX13(2)
------>
YAB5
<---------
KAN1
<----
-------
ICU4
--------->
ANAC55(2)
----------->
RAV1(2)
<---------
ANAC58
----->
ICU4
------>
ZmHOX2a(2)
<----------
DOF2
<---------
ANAC46
------
YAB1
<---------
ARR11(3)
<----------
DOF2
<---------
ANAC58
-----
RVE1(2)
--------->
ARR11(3)
--------->
GLK1(2)
--------->
GLK1(2)
<-
--->
YAB1
<---------
YAB5
<---------
GLK1(2)
--------->
KAN1
<--------
---
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
KAN1
------>
ZmHOX2a(1)
<---------
WOX13(1)
taattaggatttttttgtttgtttgttttatgatctcacataatatgtctggctgtaagattctttctttcctggccttgaaattctctaattgctttta
23235200
<---------
YAB5
<---------
ARR11(3)
<---------
GATA12
--------->
ARR11(3)
--------->
GATA12
<---------
AHL20(2)
<---------
AHL25(3)
--------->
AHL25(2)
<---------
AHL25(1)
--------->
AHL25(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL12(3)
--------->
KAN1
<---------
AHL12(3)
<---------
AHL20(2)
--------->
AHL25(3)
<---------
YAB1
<---------
AHL25(3)
--------->
AHL12(3)
<---------
WOX13(2)
--------->
AHL20(3)
--------->
MYB46(3)
<---------
CCA1(2)
<---------
AHL20(3)
<---------
ICU4
-----
TOE2(3)
----------->
GT1
<----------
DOF2
<---------
AHL25(1)
--------->
YAB1
<---------
DAG2
--------
AHL20(2)
--------->
WOX13(2)
--------->
YAB1
--------->
ETT(2)
--------->
TOE2(3)
-
--
DOF2
>>>>>>>>>>>>>>>>>
LFY
<---------
YAB1
--------->
AHL12(2)
<---------
YAB5
<----------
DOF2
tgttattgaagaaccaatgtaaattaaatcttatctttatcatgtgttatattattctatggtcgtcagtaatcttcactaatccataactttatttctc
23235300
--------->
AHL20(2)
----
<---------
AHL20(2)
--------->
GLK1(2)
--------->
YAB1
<---------
WOX13(2)
--------->
ARR11(3)
<---------
YAB1
<---------
YAB5
--------->
RVE1(2)
<----------
DOF2
---------->
ID1
--------->
AtMYB61
<-
<---------
DAG2
<---------
DAG2
----------->
GT1
--------->
YAB1
<---------
GATA12
<-----------
GT1
<----------
DOF2
<-----------
HVH21
<---------
YAB1
<---------
ARR11(3)
--------->
ID1
<-----------
GT1
---------->
DOF2
<---------
AHL12(1)
--------->
GATA12
ttgtcactttatgatataaactttttgtcatttaaaagtctgtcagaggtaaaaacaaaaacaaaaacaaaaaatcatagtaaaccaaaacaaaatctag
23235400
<---------
DOF5.7(1)
-------->
P
<---------
At4g35610
--------->
At4g35610
--------->
At4g35610
--------->
DOF5.7(1)
--------->
RAP2.6(3)
<---------
ZAT2
-----
--------->
DOF5.7(1)
<---------
At4g35610
<---------
ANAC46
--------->
MYB52(1)
--------->
DOF5.7(1)
<---------
AtLEC2
*
TSS
--------->
DAG2
<---------
DOF5.7(1)
<----
<---------
ARR11(2)
--------->
DOF5.7(1)
<---------
ANAC58
--------->
ARR11(2)
--------->
DOF5.7(1)
<---------
DOF5.7(1)
-----
--------->
MYB52(1)
--------->
ARR11(2)
----------->
GT1
--------->
DAG2
<---------
DAG2
<---------
ANAC58
----->
YAB1
<---------
ARR14(2)
<----------
ID1
---------->
DOF2
--------->
TOE2(3)
----------->
HVH21
--------
KAN1
--------->
DOF5.7(1)
--------->
DOF5.7(1)
--------->
DOF5.7(1)
<-----------
GT1
------
aataaacaaaacggagtcgtaagagagaaccggttcgaa
caaaaacggcaaaaaaaaaaaaaggggagcagcaacctttttccaattttgcgtgaagcag
23235500
<---------
RVE1(2)
<---------
ARR11(2)
<---------
ARR14(2)
--------->
ARR11(2)
--------->
ARR14(2)
----------->
GT1
<------
ZmHOX2a(1)
<----------
ID1
<---------
TOE1(2)
----------->
GT1
<---------
KAN1
<------
ZmHOX2a(2)
------------------------>
ANAC81
<-----------
ARR10
---------->
DOF2
--------->
GLK1(2)
--------->
DOF5.7(1)
<---------
GATA12
<
--------->
DOF5.7(1)
--------->
RVE1(2)
<---
----------->
GT1
<---------
GLK1(2)
------>
ZmHOX2a(1)
<
--------->
ZAT14
--------->
LBD16
--------->
GATA12
<----
<---------
ZAT14
--------->
DOF5.7(1)
--------->
ANAC46
<---------
GATA12
<----
---->
ZAT2
--------->
DOF5.7(1)
<---------
LBD16
<---------
ARR14(2)
<----
-----
At4g35610
--------->
DAG2
--------->
ARR11(2)
--------->
GLK1(1)
<----
---->
At4g35610
---------->
DOF2
--------->
CCA1(2)
===============
HOX2a_HOX2a
----
----->
RAV1(1)
--------->
DOF5.7(1)
--------->
YAB5
--------->
KAN1
<---------
LBD16
<------
cagtgaagaaaaaaaggaaaaaaagtgagtgagagaagaagattagaaacgacgatatatacggagaatctcaggatttcgatcctgtttttgttttttc
23235600
----
<---
<----
<----
------
-------
<-------
<---------
KAN1
------>
NtERF2
-------
--------->
LBD16
-----
--------->
ANAC46
<----
---------
DAG2
<---------
YAB1
<---------
LBD16
<------
------------
AGL15
<---------
YAB5
--------->
KAN4(2)
------>
NtERF2
----------
DOF2
<---------
DEAR3(1)
------>
ZmHOX2a(2)
<------
NtERF2
-------------
AGL3
--------->
ATERF1(1)
<---------
ANAC58
<------
ZmHOX2a(2)
--------
-------------
AGL2
<------
NtERF2
<---------
ANAC58
<---------
ARR11(3)
--------
-------------
AG
------>
NtERF2
<---------
ICU4
--------->
GATA12
<-------
-------------
AGL1
--------->
ETT(2)
<---------
At4g35610
--------->
ARR11(3)
<--------
----------->
AGL15
<---------
DEAR3(1)
<---------
RVE1(2)
--------->
DOF5.7(1)
---------
-----
GT1
<---------
AtLEC2
--------->
ICU4
---------->
DOF2
--------------------->
WRI1
<---------
LBD16
tacttttggtactctcc
atggcgacggagcgtcatcattttgagcttgctaaaggcatcaatggccttgataagatcgttctccgcgagtctcgcggccg
23235700
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
ALFIN1
--------->
ATERF1(1)
----------->
GT1
<------
NtERF2
--------->
ZAT14
------>
NtERF2
--------->
At4g35610
<---------
ANAC46
<---------
ZAT14
--------->
DEAR3(1)
<---------
At4g35610
<---------
DEAR3(1)
----->
ARR14(2)
--------->
ATERF1(1)
------
ARR14(2)
<------
NtERF2
-----
At4g35610
--------->
RAP2.3(1)
-----
RAP2.6(3)
------>
NtERF2
--->
RAP2.6(2)
<---------
ATERF1(1)
-->
SPL7(1)
<---------
DEAR3(1)
--------->
GATA12
--
DREB2C(1)
<---------
LBD16
<---------
GATA12
-->
ATERF1(1)
--------->
ANAC46
--------->
GATA12
<------
ZmHOX2a(2)
---->
At4g35610
--------->
O2
------>
ZmHOX2a(2)
<---------
GATA12
--
NtERF2
<---------
O2
--------->
At4g35610
<---------
WOX13(1)
---
DEAR3(1)
<---------
LBD16
<---------
GATA12
<---------
RVE1(2)
---
->
ATERF1(1)
<-----------
GT1
<---------
AGP1
<------
ZmHOX2a(2)
<----
->
DREB2C(1)
<---------
AHL12(1)
--------->
ZAT6
<---------
RVE1(2)
--------->
GATA12
--------->
YAB1
--
ATERF1(1)
--------->
AHL12(1)
<----------
DOF2
<---------
At4g35610
--------->
ATHB12
--------->
YAB5
-
ATERF1(1)
<---------
AHL12(2)
--------->
ZAT18
<---------
RVE1(2)
<---------
YAB1
--------->
ATHB12
>
DEAR3(1)
--------->
AHL12(2)
<---------
ZAT18
--------->
GATA12
<---------
AHL20(2)
<---------
YAB1
ctctgcagag
gtaaattttcacgcggcgtcgtgctctatctctagttgatctgagatttagatcaatttgattggagatcgatttttgtagtatgattac
23235800
<-------
<-------
------>
ZmHOX2a(2)
<---------
KAN1
--------->
KAN1
--------->
GLK1(1)
<---------
GLK1(1)
--------->
At4g35610
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
ARR11(2)
<---------
ARR11(2)
<---------
GATA12
------>
ZmHOX2a(2)
--------->
GATA12
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR11(2)
<-----------
ARR10
<---------
ARR14(2)
--------->
ARR14(2)
<---------
GATA12
<---------
RVE1(2)
--------->
AGP1
--------->
RVE1(2)
--------->
GATA12
<---------
AGP1
--------->
ARR14(2)
<---------
ARR11(3)
<---------
RVE1(2)
<---------
ARR14(1)
<---------
ARR11(3)
<---------
CCA1(2)
<---------
ARR14(2)
--------->
LBD16
<---------
GATA12
--------->
MYB52(1)
--------->
ARR14(2)
--------->
ARR14(2)
--------->
GATA12
<---------
ARR11(2)
--------->
RVE1(2)
--------->
ARR11(2)
<---------
CCA1(2)
--------->
ZAT6
<---------
ARR14(2)
------>
GATA12
--------->
ARR11(3)
<---------
YAB1
<---------
WOX13(2)
<-------
-----
YAB1
<---------
ARR11(2)
<---------
ZAT6
<---------
ZAT6
<---------
LBD16
<-
gatttgcaaatctcttagatccttgggttttagctctagtgttattgagttctgtatttgtttatgcaatttgtgttaatggaagaaccggatctgcgtg
23235900
Previous
Next
AGI:
At5g57330.1
Description:
aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43213.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718)
Range:
from: 23235440
to: 23238315
Orientation: Forward
Links:
TAIR
MIPS
AIP
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version