Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->YAB1                ----------->GT1             --------->MYB52(1)             ------------>MYB.PH3(1)            <---------ARR14(2)                                               --------->WRKY38(1)  <-- ---------ARR11(3)       <---------ATHB12                                 --------->TOE1(1)       <-- -------->ARR11(3)   <---------YAB1                    ---------->DOF2<---------At5g28300         <-- -ID1  ---------->DOF2 --------->WOX13(1)        ---------->DOF2     <-----------GT1          <------   gagatgtttcaaaggaaacggttatcaatcatagaagtcgaaatcgaaattgaaagtaaaagttttgaaatttacctcgttcaccagcatcactgtcttt  23125600        <------ZmHOX2a(2)       <---------ARR11(3)       --------->ARR14(2)       <---------ARR14(2)       --------->ARR14(3)       --------->ARR11(3)       <---------ARR14(3)       --------->GLK1(2)                                                        --------->DAG2       <-----------ARR10                            <-----------HVH21          ---------->DOF2      <------ZmHOX2a(1)                          <---------ANAC58    <---------ANAC46    <---------TOE2(3)                            <---------ANAC58    <---------ANAC58 -------ANAC46          <---------HSFB2a(2)     <---------TOE1(2)    <---------ANAC58 -------ANAC58          --------->HSFB2a(2)<---------ARR11(3)   <-----------RAV1(1)               --- -------ANAC58    --------->ARR11(3)       --------->ARR11(3)   <---------MYB46(3)                --- ----DOF2------>ZmHOX2a(2)         <---------ARR11(3)           --------->MYB52(2)  <----------DOF2<-   gcgtttgaggatcttcttcacatcttgtcgaagccaagaactaaacatcttaggtgtcagtaacatttgttgcttgtttcaaaaagctttttagtttgag  23125700                                                                               --------->ALFIN1                                                                   <---------DAG2                                                                   <----------DOF2                                                     ----------->GT1        --------->DAG2                                                --------->O2      <---------------AGL15                 --------->ANAC58               <---------ALFIN1  --------------->AGL15   --------->ARR14(2)                         <---------ALFIN1   ----------------->AGL1   <---------ARR14(2)     <------ZmHOX2a(1)--------->PCF2        ----------------->AGL2 ------>GLK1(2)  --------->ANAC46        ----------->HVH21       ----------------->AGL3     --------- ------>CCA1(2)  --------->ANAC58     --------->ZAT6<---------HSFB2a(2)    ---------->DOF2 ---------- ------TEIL  --------->YAB1     --------->GLK1(1)   --------->HSFB2a(2)<---------YAB1--------->GLK1(2)   attcgaattcgaaactcataagccaagaggagagaaatcaacactgacccacatctcgaaaaatcgttcctttatgagaaagtggagaatcgaaaaaggg  23125800                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                             ------->PIF5                                                                                             ------->MYC4                                                                                             --------                                                                                             ------->MYC3                                                                                             <-------MYC4                                                                                             ------->MYC2                                                                                             <-------MYC3                                                                                             <-------PIF5                                                                                             <-------MYC2                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                <---------SPL7                                                              ---------                --------->ZAT18      <------MYB46(1)                            --------->DAG2-------              <---------------AtSPL8 <---------MYB46(3)                        ======================              <---------------AtSPL3 <------MYB83                        <----------ID1     ---------           --------->ALFIN1      <---------MYB46(3)<---------TOE2(3)---------->DOF2        ---------- >DAG2   --------->ALFIN1     <-----------RAV1(1)  <---------TOE1(3)================================= >DOF2   <-----------RAV1(1) <---------TOE2(3)     <---------YAB1>>>>>>>>>TBF1 ---------->DOF2-------   tctctctgtgtgtgtgggggtactgactactgatgttgttggtttctgagattaagattagggagaagaagaaaggagacaaaaagagagaaacacgtgg  23125900 -----NtERF2 ------>LBD16 ------ANAC58 ------ANAC46 ------ANAC58 --NtERF2 -----LBD16 >ABF1 -O2                                                                         --------->AHL20(2) >ANAC55(2)                                                            ------>MYB46(1) -ANAC55(2)                                                          --------->DREB2C(2) -TGA1a                                                              --------->DEAR3(1) >ANAC46                                                             --------->DEAR4(1) >TGA1a                                                              <---------MYB55(2) -->ALFIN1                                                           <---------MYB46(2) =bZIP_DOF                                                           --------->MYB46(3) >O2--------->MYB52(1)             <---------YAB1                   --------->DEAR3(2) -->OsbHLH66                      <---------AHL20(2)   --------->MYB52(1)   --------->AHL20(2) =bZIP_DOF                      <---------YAB1         <-----------GT1 ------>MYB83               <-- ---->HVH21                 ----------->GT1           <---------ATHB12--------->ORA47(1)          <--   cggagataacgggaagatggagattgaagagagtattattttggtgatttgagcaaatcacggtttcttcaccgaccattaaaaaaaacacagaggtagt  23126000                                                                                              <------                                                                                            ---------                     *TSS                         --------->ZAT14                       <-----------HVH21           <-----------HVH21     --------->ICU4  <----------DOF2                       <----------DOF2 -------ANAC58      ---------->DOF2         ------>MYB46(1)                           <---------ANAC58 -------ANAC58 <---------ANAC55(2)          ------>MYB83           <---------ZAT14    <---------ANAC58   gagtgtctggctctgtcacttgaaaaggagagggaatgagtaaaccaaacactttagtagtctctagactctactgtctcttcttcttgctttcacgcgt  23126100             --------->AHL20(2)                           ----------->GT1             <---------AHL20(1)                 <---------YAB1                <-----------GT1       --------->ANAC55(2)                   --------->AHL20(2)              --------->AHL20(2)     <-----------GT1          <----------DOF2<---------AHL20(2)              <---------AHL20(2) <---------AHL20(2)   <---------LBD16       --------->AHL20(1)           --------->AHL20(2) --------->AHL20(2) <-----------GT1         --------->AHL20(2)           <---------AHL20(2)         - ---ANAC46   <---------AHL20(2)             <---------AHL20(1)         --------->TOE2(3)       ------ >ANAC46<---------MYB59 --------->LBD16     <---------AHL20(2)   <---------ICU4          ------->GAMYB   gaattttttacctattttattttttccgcgttctttattttcaaaataaaattatagaatgggataaacattacattaattaactattcaaccgagaaaa  23126200                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                  <---------YAB1                                                                                  --------->ICU4                                                                                --------->YAB1 ------                                                                         <---------ARR14(2)  <-------                                                                         --------->ARR14(2)  <-------                                                                        <---------CCA1(2)    <-------                     --------->ETT(2)                                  --------->LBD16       --------            --------->YAB1                                            <---------ANAC58       --------            <---------ICU4                                            <---------ANAC55(2)    <-------         --------->YAB1                                               <---------ANAC58       <-------        <---------AHL20(2)                          <----------DOF2   --------->ANAC55(2)    --------        <---------YAB1                             <---------ANAC58  ----------------->AG    <-------       --------->AHL20(1)                    <----------DOF2         ================================       --------->AHL20(2)                 <---------ARR11(3)         ----------------->AGL1 ---------       <---------AHL20(1)                 --------->ARR11(3)      --------->GLK1(1)       ----------- --------->DOF2      <---------ETT(2) ---------->DOF2             <---------GLK1(1)       ----------- ---->DOF2  --------->AHL20(2)   ---------->DOF2   <---------ANAC58  <---------LBD16 ------->TEIL   agaaaagaatataataatatcagtcgacagaaaaacaaaggaaagctcttttggcttttcatcgagtgatttccgtatccgataatgaatatatgacgtg  23126300 <---------ALFIN1 ->ANAC55(2) --ANAC55(2)          <---------MYB59 --ANAC58             <-----------------AGL3 --->ALFIN1        <------ZmHOX2a(1) --ANAC46      --------->TOE1(2) --bZIP60(1)  --------->O2 --bZIP60(2)  <---------O2 ->bZIP60(1)  --------->ANAC58 ->O2         --------->ANAC58 --ANAC58     --------->TGA1a<---------TOE2(3) --TGA1a      --------->ANAC46 ->TGA1a      <---------TGA1a<---------TOE1(3) --O2         --------->ANAC55(2)       <-----------GT1                           <---------WOX13(1) =======================================MADS_MADS                      <---------ANAC58 -->STF1      <---------ANAC55(2)     <---------MYB52(1)               <---------ANAC46 >HVH21  ----------->HVH21  <---------At5g28300           <---------DEAR3(2)    --------->ATHB12 >TGA1<-----------HVH21    <-----------GT1     <---------MYB46(3)      <---------ANAC58      ------>ZmHOX2a(1)   gccaaacctgtctgacacgtaggacctatttacggtttctgttaaccagttgttcacagtctgttcgatgtttgtgtggaattgattgatgtctccttac  23126400                 --------->ALFIN1                 <---------MYB46(3)              --------->LBD16             <---------ANAC58                                                                      --             <---------ANAC58                                                                    ----             <---------ANAC46                                                <--------P        ------            <---------LBD16                      <---------MYB52(1)         <-------GAMYB <----------      <-------TEIL<-------GAMYB                 --------->LBD16 --------->TOE2(3)   <---------AHL20(2)    --------->ARR14(2)                        <---------LBD16   --------->TOE1(3)   --------->AHL20(2)    <---------GLK1(2)               --------->YAB1--------->ALFIN1         <---------MYB46(3)  <-----    <---------ARR14(2)             --------->AHL20(2)           --------->YAB1<---------MYB46(3)-----   attccagattcatatgcgggtgttgaattgttcgacattaaaaatgtttccggtgttcgacattaatcttaaaatcgtggttgtttttaattttacaaca  23126500  Previous    Next  AGI:  At5g57100.1    Description:  transporter-related. similar to transporter-related [Arabidopsis thaliana] (TAIR:AT5G55950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43193.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 23123528    to: 23126021    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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