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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                               ------->TEIL                             <--------ATHB1
                                            <---------ATHB12                            <---------ICU4
                 ---------->DOF2    <---------ARR14(2)                                  --------->YAB1
      --------->AHL20(2)            --------->ARR11(3)                                  --------->ATHB12
      ---------->DOF2               --------->ARR14(2)                                 <---------ATHB12
      <---------AHL20(2)            <---------ARR11(3)   --------->AHL20(2)       --------->TOE2(3)
     <---------ATHB12              --------->RVE1(1)    <---------YAB1          --------->GLK1(2)
-------->At4g35610                 --------->CCA1(1)  --------->YAB1           <---------GLK1(2)<---
---------At4g35610      --------->LBD16 <---------------------WRI1    <---------ANAC58 --------->ICU4
-MYB52(1)     ----------->GT1  --------->AHL20(2)    <---------ATHB12 <---------ANAC58 <---------YAB1
 
taagctcaataaatcaccagtaaaacccccaaaaaaaaatatctgcaatgaactcaatgataatatacaaattgccttctaagaatctcaatgattagat  23082200
                                                                                                <---
                                                                                             -------
                                                      --------->TOE2(3)                    <--------
                                                     ------>ZmHOX2a(2)                    ----------
                                                <---------WOX13(1)                     --------->TOE2(3)
                                              --------->ATHB12                        <--------HAHB4
                                             <---------AHL20(2)                       --------->ATHB12
                                             <---------YAB1                           <---------ICU4
                                         <---------ICU4                              --------->ICU4
                                         <---------AHL20(2)                          <---------YAB1
                    --------->WOX13(1)   --------->ATHB51                          --------->YAB1
                  <---------ATHB12       <--------ATHB1------>ZmHOX2a(1)           <---------ICU4
                 ------>MYB46(1)         --------->AHL20(2)                    --------->AHL20(2)
                 ------>MYB83           <---------ATHB12                       <---------AHL20(2)---
                --------->WOX13(1)      <---------ATHB51           ----------->GT1<---------ATHB12
----TEIL   ---------->DOF2              --------->ICU4--------->TOE1(3)       <---------ATHB12 <----
 
tcatacattcaccataaaccaatcaatcgcagaagagaaaacaataatttgattgatccttaaataacttcagtaaaactaataaatcatcattaaaccc  23082300
           --------->ARR11(3)
   ----------->GT1
  >>>>>>>>>TBF1                                                                                   --
--------RAV1(2)                                                                                  ---
-->ANAC46  <---------ARR11(3)                                                                    <--
---GT1    --------->CCA1(1)                                                                    -----
>DOF2 >>>>>>>>>>GT-3b   --------->YAB1                                            <---------ARR14(2)
------>LBD16   --------->At4g35610                    ----------->GT1             --------->ARR14(2)
-----LBD16--------->RVE1(1)                  --------->AHL20(2)          <------ZmHOX2a(1)    <-----
 
cagaagaagaaaaatatcatctcaaaatcagaataaacacaaaatcaatttaagaacgagaaaaaaatcaaatcgaggatgagagaattcgatggaatta  23082400
              --------->At4g35610
              <---------At4g35610
       --------->REM1(2)
 --------->GLK1(2)
<---------GLK1(2)       --------->At4g35610
------->ANAC46--------->ZAT14
------>HSFB2a(2)        <---------At4g35610    <---------KAN4(2)
-------HSFB2a(2)    <-----------TGA1<----------DOF2                                               --
---->MYB52(1) <---------ZAT14      <---------ANAC58    <---------ARR14(2)              <---------AHL20(2)
------GT1----------->HVH21         <---------ANAC58    --------->ARR14(2)             <----------DOF2
 
ccagaaactgtgttgacagcagtcgtcatcttcgtcttgctttagacgagaatgagcaaattcgatggaatttagggattttgtaggggttttattgtga  23082500
                                           <---------ANAC58
                                           <---------AtLEC2
                                      <---------ICU4
                                     <---------YAB1
                                    --------->AHL20(2)
                                    <---------AHL20(1)
                    <---------MYB52(1)--------->ATHB51  --------->ANAC46
               <---------ARR14(2)   --------->AHL20(1)  --------->ANAC58
               --------->ARR14(2)   <---------AHL20(2)  --------->ANAC58     ------>ZmHOX2a(1)
        ----------->GT1            --------->YAB1   --------->ANAC46        <---------MYB59
<-----------------AGL1         --------->ICU4<---------YAB1                *TSS
<-----------------AGL2    ----------->GT1  <---------ANAC58 ----------->RAV1(1)
------->GLK1(2)--------->GLK1(2)<---------ICU4--------->ATHB12<---------ALFIN1
 
gagtctgaatttgggaaaaatccgttgagaggtaaaaattataattgcatgattcccacaaggcaacactggaattggtcctaatttgaaacatcgccag  23082600
                                                                                                ----
                                                                                          <---------DOF5.7(2)
                                                                                        --------->DOF5.7(2)
                     <---------ALFIN1                                                  --------->TOE1(3)
                  <---------TCP20                                                      --------->TOE2(3)
                  <---------TCP15(1)                                                  --------->ANAC58
                  --------->PCF2                                                      --------->bZIP60(2)
                 <---------PCF2                                                       --------->ANAC58
                <---------ANAC58                                                      --------->O2
                <---------ANAC58                                                    <---------ALFIN1
            <------------CBF                                          <----------DOF2------>NtERF2
          <---------YAB1                                         <----------DOF2 --------->ANAC58
      --------->TOE2(3)                                     ------>ZmHOX2a(1)    --------->ANAC46
     <---------At4g35610<---------DAG2<---------YAB1  <---------AHL20(2)         --------->ANAC58<--
     --------->At4g35610<----------DOF2              --------->AHL20(2)          --------->RAP2.6(2)
 
actgttttagcttaatattgggtcccacttttatatgttttatgctaattaagtcattaaatccttctcttttctttgtttagaccgccacgttaactat  23082700
                                                    <---------YAB1
                                               --------->YAB1
                                            --------->YAB1
                                           --------->ICU4                                        ---
                                           <---------YAB1                                       <---
                                       --------->TOE2(3)                                   ---------
      <---------PCF2                  --------->ANAC55(2)                                <---------LBD16
<---------YAB1                        <---------ANAC55(2)                        --------->TOE1(3)
----->AHL20(2)     <---------YAB1    <---------TOE2(2)    ---------->ID1         --------->TOE2(3)
-------AHL20(2)   --------->AHL20(1) <---------TOE1(2)<----------DOF2            <----------DOF2----
 
tttataatgggcccttacaaatattatggcccatgggtcttacgttataatggtcatctttgttttttttttggttcagtctaactttaacatgcggaga  23082800
                                                                                                  --
                                                                                                 <--
                                                                                                ----
                                                                                             <------
                                                                                           <--------
                                                                                          --------->ARR11(3)
                                                                                          <---------ARR11(3)
          <---------ARR11(3)                                                              --------->AHL20(1)
          <---------GLK1(2)                                                               <---------AHL20(1)
          --------->ARR11(3)                                                              <---------AHL20(2)
------>ZAT6                                                 --------->At4g35610           --------->AHL20(2)
------ZAT14                                                 <---------At4g35610      --------->AHL20(2)
>LBD16  ----------->ARR10                   <------ZmHOX2a(2)                        <---------AHL20(2)
----->ZAT18    <-----------GT1<----------DOF2     --------->YAB1       <----------DOF2   --------->AHL20(2)
 
acactattggatagatttttactcaagagtcgacttttatgaaatcgatccattcatattttgagttgccatttctttcttatatgaataaaatatattt  23082900
                                                                                   --------->ANAC58
                                                                                   <---------O2
                                                                                   --------->O2
                              <---------ICU4                                       --------->ANAC46
       ----------->GT1        --------->YAB1                                     <---------ALFIN1
 <---------ICU4              --------->ICU4                                     <-------TEIL
------->YAB1            --------->YAB1                                         --------->CCA1(2)
-------AHL20(2)        --------->AHL20(2)                                     --------->ARR14(2)
----->AHL20(2)   ----------->GT1<---------YAB1        <-----------GT1         <---------ARR14(2)
---AHL20(2)    --------->MYB52(1)        ----------->GT1--------->ANAC46 --------->CCA1(2)    ------
-AHL20(2)   --------->YAB1   <---------ATHB12  <---------AHL20(2)--------->TOE2(3) --------->ANAC58
 
ttaataactatggaaaaataacgaaaataaaaatcattatagaatagtattttttttatacaaaactacataaatgatatggatacacgtctagcaaaat  23083000
             <-----------GT1              <---------ANAC46
             --------->ZAT6       --------->ANAC58
       --------->AHL20(2)         --------->ANAC46
       <---------AHL20(2)         --------->ANAC58
      <---------AHL20(2)  <---------TOE2(3)
  <---------MYB52(1)     ---------->DOF2  <---------ANAC58
 <-------GAMYB        <----------DOF2     <---------ANAC58    <---------ZAT18                -------
----------->GT1      --------->TOE2(3) <---------CCA1(2)--------->MYB52(1)                 ---------
---->DOF2  <-----------GT1<---------TOE1(3)       ----------->HVH21                        ---------
 
agcccgttatttatttacactcttcctttaaagttgcaagtcatatcgtgtctctgacttatcggtgcaattttagacaatacagtttcaaactttgacc  23083100
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AGI:  At5g57000.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65331.1)
Range:  from: 23080978    to: 23082576    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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