Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <----------DOF2                                                                            <-------TEIL   --------->ANAC46                                                                           --------->ARR14(1)                                                                           --------->CCA1(2)                                                           <---------HSFB2a(2)       <---------DAG2                                                           --------->HSFB2a(2)   <------ZmHOX2a(2)                                                     <---------------AGL15--------->ARR11(1)                                                     --------------->AGL15<---------ARR14(2)                      <----------DOF2               =================================================                 --------->YAB1     ------------>CBF----------------->AGL3<---------GLK1(2)--------->YAB1                <---------YAB1      --------->MYB46(3)   <---------AHL20(2)--------->GLK1(2)        <<<<<<<<<TBF1<---------ANAC58            --------->ZAT18          --------->ARR14(2)     <<<<<<<<<TBF1   <---------ANAC58    --------->YAB1<-----------TBP  ----------->ARR10  --------->ANAC55(2)   tagtttcttcttcttcttatgatgcttttgtgatttcaaccaatgggaatggccactatttatagaagaagagagagattcggatcactttatacataat  22989800                                                                                    <---------TOE2(3)                                                                                    <---------TOE1(3)                  --------->TOE2(3)                                               <---------AHL20(2)        <-----------GT1                      <---------YAB1              ---------->DOF2   <---------AHL20(1)                       <---------TOE2(3)          --------->ANAC58   --------->AHL20(1)                  --------------->AGL15           --------->ANAC58   <---------AHL20(2)                  <----------DOF2       <---------ZAT2      <---------AHL20(2)   --------->AHL20(2)           <---------ICU4               --------->At4g35610 --------->AHL20(1)  <---------AHL20(2)            <--------HAHB4               --------->ZAT2----------->GT1  --------->AHL20(2)           <---------ATHB12              <---------At4g35610 --------->AHL20(2) ======================================================MADS_MADS<-------TEIL     <---------AHL20(1)   ccaaataaatttacgaataacatcaacttgcccatcattttctttttatgttagatttgttccagcttcattcaagaaagtaatttaatgttagagtttt  22989900                                                      ----------->GT1                                                   --------->GLK1(2)                                          --------->ATHB51                                          --------->ATHB12                     --------->ANAC58                                          <---------ICU4                       --------->ANAC58                                          -------->ATHB1                       --------->ANAC46                                         --------->AHL20(2)                    --------->ANAC55(1)                                         <---------AHL20(2)                 <---------REM1(2)             ------------------------>ANAC81       <---------ARR14(2)   --------------->AtSPL8        ------->GAMYB                    --------->ICU4                 --------------->AtSPL3     --------->MYB52(1)                  <---------ATHB51               <---------------AtSPL8      <     ----------->RAV1(1)           --------->TOE2(3)  <---------ANAC55(2) <---------SPL7         ---- --------->ANAC58                 ----------->GT1  --------->ARR14(2)--------->DAG2             ----- --------->ANAC58                 <----------ID1<---------ANAC46    ---------->DOF2     <---------ARR11(3)   agcaagacaacagagtatcaaacaaactaatagaaaacgtcaaattattggcgaatatgtaaaaaacaaaaaaagtcgtacacgcaagaagataactatc  22990000                      ------->GAMYB                      --------->RAP2.6(2)                      --------->DEAR3(1)                      ----------->HVH21                     --------->ATERF1(1)                     --------->DEAR3(2)                    <------NtERF2                    --------->ZAT2                    <---------ATERF1(1)                           <-----------GT1                    <---------At4g35610                        --------->AHL20(1)               --------->ANAC46                     <---------AHL20(2)         --------->YAB1------>NtERF2     <------ZmHOX2a(1)     <---------AHL20(1)    ------------>CBF--------->At4g35610 --------->ANAC58       <---------ARR11(3) ------------CBF    <---------ZAT2      --------->ANAC58--------->YAB1           <---------ARR11(3) -------->CBF<---------DOF5.7(2)      <-----------RAV1(2)      --------->ARR11(3)--------->ARR11(3) ---->YAB1   --------->MYB52(1)---------->DOF2     --------->AHL20(2) ------>ZmHOX2a(1)   gcaattgccaatagtaaacggcagccgacccaaaaaagaggcaggaaaacttatttaatgagaaatattttcctctgttttgaaatcttcttgtggtcat  22990100                                                                                                    <                                                                                                    <                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      --------->GLK1(1)                                                 <---------AHL20(2)                   --------->CCA1(2)                                                --------->AHL20(2)                    <---------GLK1(1)                                               <---------YAB1            <---------ARR11(3)        --                                              --------->AHL20(2)         --------->AHL20(2)        <-             <------ZmHOX2a(1)              <---------TOE2(3)            --------->AHL20(1)        <-            ----------->HVH21               <---------YAB1              <---------CCA1(2)        <---           --------->LBD16                 <---------AHL20(2)       <------ZmHOX2a(2)--------->ARR14(2)          <-----------RAV1(2)              --------->AHL20(2)   <---------TOE1(2)    <---------ARR14(2)      ------>NtERF2  <---------WRKY38(1)   --------->YAB1      <-----------GT1       --------->ARR11(3)     --------->DEAR3(1)               --------->ICU4         <---------ANAC58        <---------ARR11(3)   <---------ATERF1(1)  --------->ANAC46 <---------YAB1      <---------ANAC58<-----------GT1     <---   ttggacgacgacccaggacatggtctacgctcttctactacttattaatattatatatgagtttcttacgatccatatattacatcagatatccgtttta  22990200                                                            --------->ATHB12                                                        --------->WOX13(1)                                                   <------NtERF2                                                  <-----------HVH21                                                  <---------RAP2.6(3)                                                  <-----------TGA1  <---------AHL20(2)                              ------>NtERF2 ---------CCA1(1)                                <---------ANAC46 ---------RVE1(1)                                --------->bZIP60(1) ------->ARR11(3)                                <---------bZIP60(1)                    <---------GLK1(1) --------ARR11(3)                                --------->RAP2.3(3)             --------->ATHB12 --------GLK1(2)                                 --------->ATERF1(2)         --------->WOX13(1) ------TOE1(3)              --------->DAG2     --------->ZAT18             <---------YAB1 ------TOE2(3)             ---------->DOF2     <---------ZAT18            --------->TOE2(3)   <------   agatttttttaaaaatgttgacacaaaaaaaaagttttggacgactaagtgccgtcatcaatccattggattacatcatcaatccattggataacccttg  22990300                                                             <---------ANAC58                                                         <---------ANAC46                                                    -------------->OsCBT                                                   ------>NtERF2                                      ------>ZmHOX2a(2)  <---------ANAC58                                    ------->TEIL   --------->LBD16                                    <---------ARR14(2)   <---------ANAC58                                    --------->ARR14(2)  --------->ZAT2                          <---------ANAC58        <---------ANAC46                   <---------ARR14(2)<------ZmHOX2a(2)<---------CCA1(2)    ------>ZmHOX2a(2)     <---------ANAC46       <---------LBD16            <---------GLK1(2)  --------->ARR11(3)      <---------ANAC58  <---------ICU4   <---------ANAC46 ---MYB52(1)<---------TGA1a <---------ZAT6 <---------ATHB12  <---------ANAC58   gtttgatctctctgaggtgagtatcgagtcgtgttatggatcccaaacattgccgcgtagcttgcgtagtaggcattggaatctcaaaacattgaaactt  22990400                         <---------ANAC58                                                      <-----                         <---------ANAC46                                                      ------                         <---------ANAC58                                                <---------ARR14(2)                       <---------YAB1                                                    --------->ARR14(2)                --------->ARR14(2)                                                 <---------bZIP60(1)                <---------ARR14(2)                                                 <----------ID1            <---------LBD16                    --------->YAB1                      <---------ETT(2)           <---------ANAC58                 --------->WOX13(1)                  ----------->HVH21           <---------ANAC46         <---------ANAC46      ------->TEIL          ----------->TGA1  <--           <---------ANAC58    <-----------RAV1(1)    --------->ANAC46<---------MYB52(1) --------->GLK1(2)   aaaaaactaagtttcgtggatactgatgcttatatgtggtttgaatcactcaaaacactgcatcttctctctgtgaggttctctgacgacaaatctgttc  22990500                                                                              <---------YAB1                                                                     --------->KAN4(1)   <----------DOF2                                                   <---------KAN4(1) ----ZAT14                    --------->ARR11(3)                    <---------ARR14(2) --->ZAT14                    <---------ARR11(3) ----------->RAV1(1)<---------KAN4(2)------->TEIL -------At4g35610 --------->ANAC46          <---------MYB52(2)      --------->ARR14(2)           <---   agaggcttttaagtgtttgtccgaaacttgaagatttagttgtgaaacgaacaacatatgtcaatgtgagaatattcagtatcaatgtgcctagtttgag  22990600                           <---------ARR14(2)                           --------->ARR14(2)                         --------->At5g28300                         <------NtERF2                        <---------DEAR3(2)                       <---------DEAR3(1)                 <---------ANAC58             <---------AtLEC2              <---------TOE2(3)   <----                 <---------ANAC58            ------->TEIL                   <---------TOE1(3)  <-----               <---------YAB1                <-------TEIL            ================================             --------->KAN4(1)       --------->LBD16          <---------GLK1(2)            ----------             <---------KAN4(1)       <---------LBD16       <---------WOX13(1)   <-------TEIL   ------    <<<<<<<<<GATA-1 <---------DEAR3(1) --------->LBD16  <---------YAB1  <----------DOF2 --------->TOE2(3) ---ZmHOX2a(1)--------->KAN4(2)    <---------LBD16  <---------GLK1(1)------>ZmHOX2a(1)------->TEIL   gagtttatctatcgattattcgtgggcggtatctcgacccgcggatgtacatggatttgtgatagatgctccttctttgaggttcatgaacattaaagat  22990700  Previous    Next  AGI:  At5g56800.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 22990215    to: 22991534    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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