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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
bZIP60(1)
<---------
ANAC46
--------->
bZIP60(1)
<------
NtERF2
<-----------------------
TaNAC69(2)
------>
NtERF2
--------->
ALFIN1
----------->
TGA1
<---------
MYB46(3)
<---------
DEAR3(1)
------>
ZmHOX2a(2)
==================================
HOX2a_HOX2a
--------->
CCA1(2)
<------
ZmHOX2a(2)
--------->
DAG2
===================================
HOX2a_HOX2a
--------->
ANAC58
<---------
AGP1
<---------
ANAC58
---------->
DOF2
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ANAC58
===================
<---------
ARR11(3)
<---------
ARR11(3)
===================
--------->
ARR11(3)
<---------
ARR14(2)
<------
ZmHOX2a(1)
=================================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(1)
--------->
ARR11(3)
<---------
ARR14(2)
==================================
HOX2a_HOX2a
--------->
ARR14(2)
--------->
YAB1
--------->
ARR14(2)
===========================
--------->
ANAC46
<---------
CCA1(2)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
ANAC46
<---------
DEAR3(1)
===========================
--------->
ANAC58
<---------
ANAC46
<---------
DEAR3(2)
<---------
HSFC1(2)
<-------
TEIL
--------->
ANAC58
----------->
ARR10
<---------
HSFB2a(1)
--------->
CCA1(2)
--------->
ZAT2
----------->
HVH21
--------->
HSFC1(2)
atgagagaacgagatacaagcaggatcacgaacacgagcagcgcgtagatctgcgacggtggcgttacgaagagaaggatcggaggaaaaagtgtttaag
22979500
----------->
GT1
--------->
ALFIN1
---------->
DOF2
----------->
GT1
====================================
HOX2a_HOX2a
------>
ZmHOX2a(2)
=====================================
HOX2a_HOX2a
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ARR14(2)
--------->
HSFB2a(2)
<---------
ARR11(3)
<---------
HSFB2a(2)
<---------
ARR14(2)
<---------
ANAC58
--------->
CCA1(2)
==========
HOX2a_HOX2a
<---------
ANAC58
------>
ZmHOX2a(2)
=========
HOX2a_HOX2a
<------
ZmHOX2a(1)
==========================
HOX2a_HOX2a
--------
==========
HOX2a_HOX2a
<---------
TOE2(3)
------>
ZmHOX2a(1)
--------->
ARR11(3)
<--------
=========
HOX2a_HOX2a
---------->
DOF2
---------->
DOF2
<---------
ARR11(3)
---------->
DOF2
aacagatcgtataaaagtgtggataaaagcgttgaggaacaaagcttgtttcctagatgaaacgagatagatcgttcaagagacgaatgagaaagaatcg
22979600
---
-----
----------->
RAV1(2)
<---------
At4g35610
--------->
ARR14(2)
--------->
LBD16
<---------
ARR14(2)
------>
NtERF2
------->
TEIL
<---------
ALFIN1
--------->
LBD16
--------->
DEAR3(1)
<---------
LBD16
--------->
ATERF1(1)
<------
NtERF2
<-----
<---------
RAP2.3(1)
--------->
HSFB2a(1)
-
<---------
ATERF1(1)
<---------
HSFC1(2)
---
<---------
ARR14(2)
--------->
HSFC1(2)
<--
--------->
ARR14(2)
<---------
HSFB2a(1)
<
--------->
ATERF1(1)
<---------
ZAT2
------
<---------
ATERF1(1)
------>
NtERF2
--------->
At4g35610
=
<---------
At4g35610
<---------
At4g35610
<---------
At4g35610
--
--------->
ZAT2
--------->
ZAT2
--------->
LBD16
======
---------->
DOF2
--------->
MYB52(1)
--------->
ANAC46
------
--------->
At4g35610
<-----------
HVH21
<---------
ARR11(3)
<---------
MYB52(1)
------
<---------
STY1(2)
--------->
At4g35610
<---------
AGP1
<---------
LBD16
--------->
At4g35610
->
GLK1(2)
--------->
STY1(2)
--------->
DEAR4(2)
<---------
ZAT2
------>
ZmHOX2a(2)
--------->
ZAT2
<-----
-
GLK1(2)
<---------
STY1(2)
<------
NtERF2
--------->
At4g35610
--------->
GLK1(2)
============
tcgaatatagatagctagctaaagctggctccgcctcagcatcacggcgagcttccgccttgatctgtgtccataatccggcagcttccgcatctgcagc
22979700
----------->
RAV1(2)
<---------
At4g35610
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<------
NtERF2
<---------
At4g35610
--------->
LBD16
<---
------>
NtERF2
<----
------>
At4g35610
<----
---->
ATERF1(1)
<----
----
At4g35610
-----
---------->
RAV1(1)
<---------
ARR11(3)
-----
--->
NtERF2
--------->
At4g35610
------->
GAMYB
------
-------
ATERF1(1)
<---------
ANAC58
------>
NtERF2
---------
ANAC46
<---------
ARR14(2)
<-------
--->
ZAT2
--------->
ZAT2
<----------
DOF2
<---------
DOF5.7(2)
<---------
LBD16
========================
RAV
--------->
At4g35610
--------->
ANAC58
--------->
GLK1(1)
------->
RAP2.3(1)
<---------
At4g35610
--------->
MYB52(1)
<---------
GLK1(1)
===========
RAV
<---------
At4g35610
<---------
ANAC58
<------
NtERF2
<---
----->
RAV1(2)
<---------
At4g35610
--------->
ARR14(2)
<---------
ANAC46
--->
At4g35610
----------->
TGA1
<---------
At4g35610
--------->
ARR11(3)
--------->
ETT(1)
-
----
ZAT2
<---------
ZAT2
<---------
At4g35610
--------->
ANAC58
<---------
WOX13(1)
------>
NtERF2
===========
RAV
----------->
HVH21
<-----------------
AGL1
<----------
DOF2
<-----------
RAV1(1)
<--
tgccgcagatatcgctgctgacgctgcttctgcttcatcggattgggtaacggaagatagtttctcctttgatggagattgatgtcggagttctccggcc
22979800
<---------
DEAR3(1)
<-----------
GT1
<---------
ANAC46
<------
NtERF2
<-------
TEIL
----------->
GT1
------
DEAR3(2)
--------->
ARR14(1)
---------->
DOF2
-----
DEAR3(1)
--------->
ARR14(2)
--------->
YAB1
-----
ATERF1(2)
<---------
GLK1(2)
<---------------
AGL15
-----
MYB46(3)
<------
NtERF2
--------------->
AGL15
<---------
LBD16
---->
ATERF1(2)
--------->
ARR11(1)
----------------->
AGL3
<----------
DOF2
---->
MYB55(2)
------>
NtERF2
------>
MYB46(1)
--------->
ANAC58
--------->
ICU4
--->
SPL7
<---------
LBD16
-------->
P
--------->
ANAC58
*
TSS
---------
--
SPL7
---------->
DOF2
--------->
CCA1(2)
------>
MYB83
<---------
AHL20(2)
<---------
AHL20(2)
<--------
------
ATERF1(1)
<---------
ARR14(2)
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
----------->
GT1
----->
NtERF2
--------->
LBD16
<---------
MYB111(2)
--------->
HSFB2a(2)
--------->
LBD16
-------
MYB52(1)
----------->
ARR10
------>
ZmHOX2a(1)
<-----------
GT1
--------->
SPL7
ggtggcat
attaacgcggcgataagattcgatttctatctcctcctacctataaaagttaattttcgagacgctctttaatcgtgc
ggaaatttttaaat
22979900
<---------
MYB52(1)
<------
NtERF2
<---------
RAP2.6(3)
<-----------
HVH21
<---------
ANAC46
>>>>>>>>>
AtERF-4
--------->
ANAC55(2)
>>>>>>>>>
AtERF-3
<---------
ANAC58
<------
NtERF2
<---------
ANAC55(2)
--------->
RAP2.3(1)
<---------
ZAT2
--------->
ANAC55(2)
--------->
ATERF1(1)
----------->
RAV1(2)
------>
NtERF2
<---------
DAG2
<---------
ALFIN1
<---------
TOE2(3)
<---------
ATERF1(1)
<--------
--------->
ZAT18
<-----------
GT1
<---------
ARR14(2)
------------>
CBF
<--------
ATHB1
<---------
ANAC58
--------->
AHL20(2)
<----------
DOF2
--------->
YAB1
<-------
TEIL
<---------
HSFB2a(2)
--------->
RAP2.3(2)
--------->
MYB52(1)
---------->
DOF2
<---------
ZAT18
<---------
WOX13(1)
<---------
AHL20(2)
<---------
YAB1
<----
>
AHL20(2)
<---------
YAB1
<---------
ANAC46
--------->
HSFB2a(2)
--------->
RAP2.3(3)
--------->
MYB46(3)
-
AHL20(2)
------------>
CBF
<-----------
RAV1(1)
--------->
ICU4
--------->
ARR14(2)
<---------
YAB1
ccatagattaaagacaatgatagtccacctggtgcgtgattaacgtgatttttagaaaataaaatcggagccgtcagttttatgctttatcaataaccgt
22980000
<---------
RAP2.6(3)
------>
NtERF2
<---------
ANAC58
<---------
DDF1
--------->
HSFB2a(2)
>>>>>>>>>>
AtTINY2
<---------
ANAC55(2)
<---------
ETT(2)
--------->
ANAC55(2)
<---------
ETT(1)
--------->
ANAC46
--------->
At1g77200
<---------
ANAC58
--------->
RAP2.6(2)
<---------
LBD16
<---------
At4g35610
<----------
DOF2
<---------
DEAR3(1)
------>
MYB46(1)
<---------
AtMYB61
------>
MYB83
<---------
MYB52(1)
--------->
At4g35610
<---------
DAG2
<-----------
GT1
<---------
DEAR3(1)
<---------
MYB46(2)
-
At5g28300
<----------
DOF2
--------->
ALFIN1
<---------
MYB59
-----
MYB52(1)
<-------
GAMYB
<---------
MYB46(3)
<-----------
GT1
--------->
LBD16
---------->
DOF2
tagattagatttatctttccgttaatcgacggtggtgattctgccgacattcttaccaaactttttccgtaacaaatttttgatcaaaaaaaaaaagaaa
22980100
<---------
WRKY18(1)
----------->
HVH21
--------->
WRKY12
<---------
ARR11(1)
--------->
ARR11(3)
<---------
ARR11(3)
<------
ZmHOX2a(1)
--------->
WRKY38(1)
<-------
GAMYB
<---------
AHL20(2)
--------->
ARR14(2)
<------
MYB83
<---------
AHL20(1)
--------->
ANAC58
----------->
GT1
<---------
AHL20(2)
<---------
ARR14(2)
--------->
ZAT6
<------
MYB46(1)
--------->
AHL20(2)
<---------
CCA1(2)
<-----------
GT1
<---------
ANAC55(2)
--------->
AHL20(2)
--------->
ANAC58
<
--------->
AHL20(2)
----------->
GT1
<---------
ATHB12
---------->
DOF2
-------->
ZAP1
ctatacaaattaactactaacactacaaatttgaaacgtgaataagtgggttacaatccaattaatttaggagaaacaaaagccatatctttgacctagt
22980200
<-----------
GT1
--------->
ALFIN1
--------->
LBD16
<---------
ZAT6
<---------
ICU4
<---------
LBD16
<---------
ANAC58
--------->
YAB1
<------
MYB46(1)
<---------
ANAC46
<---------
YAB1
<------
MYB83
------>
MYB46(1)
<---------
ANAC58
----------->
GT1
----------->
GT1
-
---------
REM1(1)
------>
MYB83
<----------
DOF2
<------
ZmHOX2a(1)
<----------
DOF2
<
cgatgtaggtttactccgg
ttaaccaaatggtctcatcactttgagtgttgaagtgaggaaagtataattactcttctctactttgatggtaacaacttg
22980300
--------->
HSFB2a(2)
<---------
ZAT2
--------->
DEAR3(1)
<---------
WRKY12
<------
NtERF2
<---------
WRKY38(1)
<---------
ANAC46
----------->
HVH21
<---------
ANAC58
--------->
ATERF1(1)
<---------
bZIP60(1)
-
<-----------
HVH21
<---------
ANAC58
<
-------->
HSFB2a(2)
<---------
LBD16
<---------
HSFB2a(2)
<---------
SPL7
<
---------
HSFB2a(2)
<----------
DOF2
<---------
LBD16
--------->
GLK1(2)
--------->
bZIP60(1)
-
gtctcgaatagaaggaactagcacttgtgactttctcttgctcataaactcggggtcaccgagcttctgtaactcaagatggcgtcgttccccattactg
22980400
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AGI:
At5g56760.1
Description:
AtSerat1;1 (SERINE ACETYLTRANSFERASE 52); serine O-acetyltransferase. Identical to Serine acetyltransferase 5 (SAT5) [Arabidopsis Thaliana] (GB:Q42538;GB:Q8LFG6); similar to AtSerat2,2 (SERINE ACETYLTRANSFERASE 1), serine O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT3G13110.1); similar to cytosolic serine acetyltransferase [Thlaspi goesingense] (GB:AAT38563.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Serine acetyltransferase, N-terminal; (InterPro:IPR010493); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004); contains InterPro domain Serine O-acet
Range:
from: 22978535
to: 22979886
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g56770.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56780.1); similar to transcripteion factor [Vicia faba var. minor] (GB:CAA66483.1)
Range:
from: 22980220
to: 22981215
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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