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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------------->
AGL15
<---------------
AGL15
--------->
GLK1(1)
----------------->
AGL2
<---------
GLK1(1)
<---------
ATHB12
<-----------------
AGL3
--------->
ANAC58
------
--------->
At5g28300
----------------->
AGL3
--------->
ANAC46
<-----
----------->
GT1
<-----------------
AGL2
--------->
ANAC46
--------->
AHL20(2)
--------->
At4g35610
<---------
WOX13(1)
<-------
TEIL
<----------
DOF2
<---------
At4g35610
--------->
YAB1
----------->
GT1
--------->
ANAC58
<------
ctaagtcttcagcagtaatttcgaaatcaagctccttgctatcagattg
ctataaatggaagataaaacacatacacaagaaatctcctttaattctctg
22923500
--------->
DOF5.7(2)
<---------
ANAC46
<---------
bZIP60(1)
===========================
bZIP_DOF
<---------
O2
--------->
O2
--------->
TGA1a
<---------
TGA1a
--------->
bZIP60(1)
<---------
TGA2(2)
----------->
TGA1
<---------
At4g35610
--------->
At4g35610
<---------
ANAC58
--------->
TOE2(3)
----------->
GT1
<---------
ANAC58
--------->
TOE1(3)
<-
=============================================
MYC_MYB
<-
<-------
GAMYB
<---------
WOX13(1)
<---------
WRKY12
<-
<---------
TOE2(3)
<---------
ANAC58
<---------
TGA2(1)
<--------
<---------
TOE2(3)
--------->
CCA1(2)
<---------
ANAC58
--------->
TGA2(1)
---------
--->
HSFB2a(2)
--------->
ARR11(3)
<---------
At5g28300
----------->
HVH21
<---------
YAB1
--
----
HSFB2a(2)
<---------
ARR11(3)
<-----------
GT1
----------->
RAV1(2)
<----------
DOF2
--
---
LBD16
--------->
YAB1
<---------
TOE1(3)
--------->
ATHB12
<-----------
STF1
<---------
DAG2
--
gaacattgaggtctctcataaaacaagatttagggttgaaaaatttac
ccttgattgcttctcatctgacgtcaaccttagccccttttgattcagaaga
22923600
--------
ARR14(2)
--------
ARR11(3)
----------
ARR10
--------->
GLK1(2)
-
At4g35610
--------->
HSFB2a(1)
--------->
ANAC46
>
At4g35610
<---------
HSFB2a(1)
--------->
AHL20(2)
------->
ARR11(3)
--------->
YAB1
<-
------->
ARR14(2)
------>
ZmHOX2a(1)
<-----------
GT1
<------
ZmHOX2a(2)
------->
GLK1(2)
<---------
ALFIN1
<---------
ATHB12
--------->
LBD16
<----------
aaatctccatcgtgaaatgttccactcgcagtc
ctgttttcaaattcaatgaaatttcacagaatcaattcaaacccagaaacaatggatcaaatctaat
22923700
---------->
DOF2
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------------->
AGL15
<-------
----------------->
AGL3
<-------
--------->
AGP1
--------
<---------
ARR14(2)
--------
--------->
ARR14(2)
--------->
GLK1(2)
--------->
ANAC58
--------->
CCA1(2)
<---------
ARR14(2)
--------
GLK1(2)
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
GLK1(2)
-
ARR10
<-----------
GT1
--------->
MYB52(1)
----------->
GT1
<------
ZmHOX2a(1)
--------->
ARR14(2)
cgattcttgtttacaatctcgccaaacaaaacagatccaagtaaagaaaggagaaatcgcgaaacttac
aggaaggaagagattggggattcttgagctg
22923800
--------->
At4g35610
<---------
AHL20(2)
<---------
ANAC46
--
At4g35610
<----------
DOF2
<-----------
GT1
<---------
ANAC58
--
ZAT2
--------->
At4g35610
------>
ZmHOX2a(2)
--------------------->
WRI1
->
At4g35610
<---------
At4g35610
<---------
ARR11(3)
<---------
ANAC58
*
TSS
->
ZAT2
--------->
At4g35610
--------->
ARR11(3)
<----------
DOF2
<----------
DOF2
gaacggagagcttaagctgcttcaagttcgatttgatcttcaccat
tttttttctttggtttcttccttgggattatcgctctcttt
ctagggtttctat
22923900
------->
GAMYB
------------>
CBF
--------->
SPL7
<---------
ATHB12
--------->
ANAC46
-
--------->
ANAC58
<---------
ANAC55(2)
-
---------->
DOF2
--------->
ANAC58
<---------
AHL20(2)
------
--------->
ANAC58
--------->
WOX13(1)
<---------
AHL20(2)
--------
--------->
ANAC58
------------>
CBF
--------->
AHL20(1)
--------->
LBD16
------------>
CBF
--------->
ALFIN1
--------->
ANAC58
<---------
AHL20(1)
--------->
LBD16
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
ANAC58
--------->
AHL20(2)
<---------
LBD16
--------->
ANAC46
--------->
MYB59
<---------------------
WRI1
--------->
AHL20(2)
<---------
LBD16
--------->
ANAC58
<---------
ZAT6
<----------
ID1
--------->
MYB52(1)
--------->
ANAC55(2)
<
ctaaataagcaatttcaagaaagtgttaggaagtggagagaagacgacgaagcaatcaataacggactaatttattttgaacgcgtaagaccgggaaaag
22924000
<----------
DOF2
<------
<---------
ANAC58
<------
--------->
AHL20(2)
<----------
DOF2
<---------
ANAC58
--------->
ANAC58
-------->
AHL20(2)
--------->
ATHB12
--------->
AHL20(2)
--------->
ANAC58
-------->
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
--------->
SPL7
----->
GT1
--------->
AHL20(2)
--------->
CCA1(2)
<---------------
AtSPL8
-->
DOF2
<---------
TOE2(3)
<---------
ATHB12
--------->
ARR11(3)
<---------------
AtSPL3
---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
----------->
GT1
<---------
SPL7
<----
aaaaaattatacattaagaaaaacaagaattaaatcatttgggctgtaagatttaaatgggcttgaattgataaatataagatggtacggcccattgctt
22924100
--------->
At4g35610
<---
----------->
RAV1(2)
<----------
DOF2
----
<---------
ZAT2
<-----------------
AGL3
<---
----------->
GT1
<------
NtERF2
<---------
WOX13(1)
----
---
ANAC58
--------->
ZAT2
<---------
YAB1
--------------->
AGL15
-----
---
ANAC58
----------->
HVH21
---------->
DOF2
<-----------
GT1
----------->
GT1
-----
CCA1(2)
<---------
At4g35610
--------->
ICU4
<---------------
AGL15
<---------
ANAC46
-----
atctctggtatatttgacagctggcgctaagaaaagtcttaattgattttctctttttttggtatcggaaaacgttttgtgtaaattggataaacgaatt
22924200
<----------
DOF2
<---------
ALFIN1
<---------
DAG2
<---------
AHL20(1)
<-----------
GT1
--------->
AHL20(1)
------->
TEIL
------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--
----->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC46
<-
------
AHL20(1)
<---------
MYB46(3)
<---------
ALFIN1
--------->
ANAC58
<---------
AHL20(1)
----->
AHL20(1)
<---------
DEAR3(2)
<-----------
GT1
--------->
ANAC58
--------->
AHL20(2)
---->
AHL20(2)
---------->
ID1
<---------
TOE2(3)
--------->
AHL20(2)
<---------
TOE2(3)
<---------
AHL20(2)
---->
YAB1
<-----------
GT1
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
--------->
AHL20(1)
atattacttttttttttcgatttgtcggtttgaaattaatatttttcccacactttaaatgtataagcaaattaatgtatttgatatcgaatttattaag
22924300
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
MYB52(1)
--------->
ZAT18
--------->
AHL20(2)
<--------
P
<---------
ARR14(2)
<---------
At4g35610
----------->
GT1
--------->
AHL20(1)
--------->
ARR14(2)
---------->
DOF2
<---------
PCF5
--------->
YAB1
--------->
HSFB2a(2)
---
--------->
GT1
--------->
TCP20
<---------
AHL20(2)
<---------
HSFB2a(2)
<---------
LBD16
--------
ANAC46
<---------
PCF2
--------->
AHL20(2)
--------->
HSFC1(1)
<---------
ANAC46
--
agcgtataaagctcacaaattcaattcaatgggaccagtttaatttaaattatattggggtagttttcgagaataggcataaataacgggggagtaatga
22924400
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AGI:
At5g56580.1
Description:
ATMKK6 (ARABIDOPSIS NQK1); kinase. Identical to Mitogen-activated protein kinase kinase 6 (MKK6) [Arabidopsis Thaliana] (GB:Q9FJV0); similar to ATMKK2 (MAP KINASE KINASE 2), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G29810.1); similar to double MYC-tagged mitogen activated protein kinase kinase 6 [synthetic construct] (GB:ABF55666.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro
Range:
from: 22921915
to: 22923887
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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