Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ANAC58                                                         --------->ANAC58                                                         --------->ANAC58           <------ZmHOX2a(1)              <----------ID1                             --------->ANAC46   <---------LBD16   ------>MYB46(1)                                     ---------->DOF2     --------->MYB52(1)   ------>MYB83                                   <---------------AGL15 --------->ANAC58 <---------MYB59                         <---------GLK1(2)   --------->ANAC58 --------->LBD16  ------ ------>P ---------->DOF2       <-----------HVH21 --------------->AGL15 --------->ANAC58       ------   ctaccaaattcaaaaagaaacaaaattcaaaccccatcaccaaaattctctaccgataaaagcaagcaaaaaacactcaccggagaggataaccagaacg  22757900                                                                                       --------->GLK1(1)                                                     --------->AHL20(2)            --------->ANAC58          <---------At4g35610             <---------ZAT14 --------->ARR11(3)       --------->ANAC58          --------->At4g35610             --------->ZAT14--------->RVE1(1)     <---------STY1(2) --->ANAC58                               --------->ZAT18--------->CCA1(1)--------->ZAT6 --->ANAC58                              <<<<<<<<<<<<<<<<<LFY --------->LBD16  --------->STY1(2)<----   caaactagtttcagcgaagaaaatggagtcccatggctcttgagaacactggagataaaatatccagagacgattaccactagctacgcatttccaggct  22758000                                                                         --------->At4g35610                                                <---------ARR14(2)       <---------At4g35610                                                --------->ARR14(2)       <---------ZAT2                                            <---------ICU4             <--------P                                           <---------YAB1     <---------ARR11(3)                               ---------->ID1   --------->GLK1(2)     <---------MYB52(1)         ----     ---------->DOF2      <----------DOF2--------->YAB1       --------->ARR14(2)             --------  --------->ANAC58     <---------ARR11(3)<---------ICU4       <---------ARR14(2)      ------->TEIL  --------->ANAC58    <---------GLK1(2) <---------YAB1       --------->GLK1(1)     --------->ANAC46  --------->ANAC46 --------->ANAC46   --------->YAB1        <---------KAN4(2)      --------->ANAC58 ------DOF2      <-----------GT1      <---------ICU4       <---------GLK1(2)       --------->ANAC58   ttgcacgttaagcccaatttcacagcatcttttggctccatcatcatcagtatctggactagaatatccatcggtagctgatcaaacgcaccaagagacg  22758100                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                               <---------ALFIN1                                                    --------->ARR14(2)         --------->ANAC46                                              <-----------GT1                <---------ALFIN1                     <------ZmHOX2a(1)   <---------YAB1<---------ANAC58   <---------ARR14(2)                     =================HOX2a_HOX2a   <---------ARR14(2)    --------->ARR14(2)                  <------ZmHOX2a(1)    <---------At4g35610                <---------TCP20                  ====================HOX2a_HOX2a  ------>MYB83         <---------DEAR3(2) -------------------->ANAC81           --------->YAB1  <---------ANAC58 <---------MYB46(3) ->CCA1(2) --------->MYB52(1)  ------>ZmHOX2a(2)   ------>MYB46(1)     ------>ZmHOX2a(2)   atgaagaagacaataacagaggaggaacatcgatcgctctctgatgattcaccaaatccttgccactattcgatcggttccacaccgatccccatacttt  22758200                    <---------ANAC58                    <---------ANAC58                   <---------LBD16   <---------HSFB2a(2)     <------ZmHOX2a(2)               --------->HSFB2a(2)    <---------ARR11(3) --------->ARR14(2)    --------->ARR14(2) <---------ARR14(2)                                <------ZmHOX2a(1)    --------->ARR11(3) <---------GLK1(2)    --------->YAB1--------->ANAC58   <------ZmHOX2a(1)<---------ANAC46 --------->HSFC1(1)   --------->ANAC58                  <-------- =========HOX2a_HOX2a--------->LBD16 <---------HSFC1(1)  *TSS           ----------->GT1  --------->ANAC46   cttcaggatcatcgtcgagtttgcggatttttgttttttctcgaaatcagaaattttcccaagaaaatcgaatcaggaaaatttgataaacacggcgttt  22758300           <---------TGA2(1)                                       ------->MYC3           --------->TGA2(1)                                       <-------MYC2           <---------O2                                            ------->MYC4           <---------TGA1a                       ----------->GT1   <-------MYC3           --------->O2                          <---------ZAT6    ------->MYC2           --------->TGA1a                   --------->ZAT14       <-------MYC4           <---------bZIP60(1)               <---------ZAT14      <---------O2           <---------bZIP60(2)               --------->ZAT18      --------->O2           <---------ANAC46               <---------ANAC58        --------->TGA1a           --------->bZIP60(1)            <---------ANAC46        <---------TGA1a          ----------->STF1                <---------ANAC55(1)     --------->ANAC55(2)        ----------->TGA1                  <---------bZIP60(2)     <---------ANAC55(2)       <-----------HVH21                  --------->TGA1a         <--------ABF1      <---------ANAC58                    <---------O2     --------->YAB1      <---------ANAC58                    --------->O2   --------->AHL20(1)    <---------ANAC58                      <---------TGA1a--------->AHL20(2)    <---------ANAC58                      <---------ANAC58<---------AHL20(2)               --------->MYB59 <----------DOF2                       ----------->TGA1  <---------AHL20(1)   <---------ANAC58 ====================bZIP_DOF          ----------->HVH21 <---------AHL20(2)   <---------ANAC46 -ANAC46----------->HVH21             <---------WOX13(1)--------->YAB1        <---------ANAC58   tttctttggtgtgacgtcgtttctagttgggatgagactgactgacgtgtactgtttaatataatgacacgtgttcaatagcgttgaagaattttggtac  22758400                                                                            <-------MYC3                                                                            <-------MYC2                                                                            ------->MYC2                                                                            <-------PIF5                                                                            <-------MYC4                                                                            ------->MYC4                                                                            ------->PIF5                                                                            <-------PIF4                                                                            ------->MYC3                                                                            ------->PIF4                                                                           <---------TGA1a                          <---------CCA1(1)                                --------->TGA1a                          <---------RVE1(1)                                <---------ANAC55(2)                         <---------ARR11(3)                                --------->ANAC55(2)                         --------->ARR11(3)                                <---------ANAC58                     --------->MYB52(1)                                    =====================bZIP_DOF                  --------->YAB1                                           <---------ANAC58                  <---------ICU4                                          ------------>OsbHLH66                 <---------YAB1                                        --------->ARR11(3)  <---------               <---------ICU4               ----------->GT1            <---------ARR11(3) <---------YAB1               --------->YAB1        ----------------->AGL1     ----------->GT1        <---------YAB1              <---------ATHB12      --------->At4g35610        --------->ALFIN1      <----------DOF2   tggctcactaatgtcaataatcataacgatattttgtgagcccaattggaaaaaaaaaactcgaagtggtcaatatcacgtgctcaacttttattgttgt  22758500                                                                            <---------ATERF1(1)                                         <---------ANAC55(2)               --------->ETT(2)                                        --------->YAB1                     <---------WRKY38(1)                                        <---------ICU4           <---------------AGL15                                       <---------ATHB12         --------->TOE2(3) --RAV1(1)                ----------->GT1--------->ANAC55(2)    <-----------------AGL1   tgttgtgaattacaaaatttcatagaaacagaaaaataccaataagtattgtttttagtggatttttcttaatctggtcgactccaaattttgttatttt  22758600                   <----------DOF2             ------>ZmHOX2a(1)                               ------>ZmHOX2a(1)                   <---           <---------ZAT18                               --------->ARR14(2)  <-----------GT1     ----      <---------ZAT14                                  <------MYB83       ----------->GT1        <---      --------->At4g35610                         --------->ATHB12 ---------->DOF2          ---------      --------->ZAT14                            <---------YAB1<----------DOF2        <---------At4g35610      <---------At4g35610            <-----------GT1   <------MYB46(1) --------->ALFIN1    <---------YAB1   gttgtgagagcagtcctcttcctttttaagagtgttttgttaccaggcctgatcatttggttcctctttaaaagtgttgttactaggcctctgatcattt  22758700                                       --------->ARR14(2)                                   <-------TEIL                                  --------->GLK1(2)                                  --------->ARR14(1)                                 <---------ARR14(2)  <---------ANAC46               --------->ARR14(2)  <---------ANAC58               <---------GLK1(2)                                <-----------GT1  <---------ANAC58     <---------ARR14(2)                                    <---------AHL20(2) --------->MYB52(2)    --------->ARR14(2)                                   --------->AHL20(2) ---MYB46(1)          <---------CCA1(2)<---------ARR14(2)                   <---------AHL20(2) ------->GT1        ------>ZmHOX2a(2)  <---------GLK1(2)                 --------->ARR11(3) ---MYB83  <---------YAB1        --------->ARR11(1)                      <---------ARR11(3)     <---- >ATHB12<------ZmHOX2a(2)   --------->AtLEC2                            <---------RVE1(1)       <----   ggttacttggatcatttttggatcgtatccattcagattcggattttgggtcttgggattttggttttgttaagagattttaattttcggtttcgatttg  22758800  Previous    Next  AGI:  At5g56180.1    Description:  ATARP8 (ACTIN-RELATED PROTEIN 8); structural constituent of cytoskeleton. Identical to Actin-related protein 8 (ARP8) [Arabidopsis Thaliana] (GB:Q9FKT0;GB:Q7PCC3;GB:Q84WA6;GB:Q8L8Z7;GB:Q8LKQ9); similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66838.1); contains InterPro domain Actin/actin-like; (InterPro:IPR004000); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 22754551    to: 22758257    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version