Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------MYB46(3)     ----------->GT1 --------->RAV1(1) >ZmHOX2a(2)                       <------MYB46(1) ->ARR11(3)                    <-----------RAV1(1) --ARR14(2)           ----------->GT1                                                    --------->At4g35610 ->AGP1           --------->ARR14(2)                                     ------>ZmHOX2a(1) ->ARR14(3)       <---------ARR14(2)                                   ----------------->AGL1 --ARR14(3)       --------->GLK1(2)<------MYB83                  --------->AHL20(2)      <---------At4g35610 ->ARR14(2)    <---------------AGL15      <---------ATHB12 ----------->GT1  --------->YAB1 --ARR11(3) <----------ID1    --------->ARR11(3)---------->DOF2  <---------AHL20(2) <----------DOF2   tcaacagtggttaaatgacaaatctggtaaaatatgttggtccaatggctcaaagacagttttgttataaatttcctatattgatactttctgctaaatt  22703600                                                              <-------TEIL                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                          <---------MYB46(3)                                                       <---------ANAC46                                                       <------MYB46(1)                    --------->MYB46(3)                 <------MYB83                               <--                  --------->ANAC58                  <---------ANAC58                      --------->At4g35610                  --------->ANAC46                  <---------ANAC58                     --------->MYB52(2)                  --------->ANAC58                  <---------ANAC46                   --------->DOF5.7(2)              <-----------GT1 <---------TOE2(3)     <---------AtLEC2                   <---------MYB52(1)             <---------ATHB12 <-----------------------TaNAC69(2)                <--------P<---------At4g35610   ggttcaaaacttcaaatcactagccactggatgaggtatggaacttgaagagttgcttggtggatacattctctaatctagggtaagtcgttagcttcaa  22703700                                             <---------TOE1(2)               <-----------GT1            --------->ANAC55(1)            --------->ATHB51              <---------ANAC55(2)          ----------------------->TaNAC69(2)            <--------HAHB4                --------->ANAC55(2)    --------->ZAT18            <---------ICU4                --------->ANAC58       --------->ZAT14            --------->YAB1                --------->ANAC46       <---------ZAT14            -------->ATHB1      ----------->GT1              <-----------GT1           --------->ICU4     ---------->DOF2------->TEIL   --------->ZAT18        <-------TEIL     <---------ZAT6         <---------YAB1--------->ANAC58  <---------ZAT14<-----------RAV1(1) -------ARR11(3)            <---------TOE2(3)<---------TOE2(2)<-----------------AGL1   tgtcttactgtgaattattacatcagaattaagaaagttattacacgtatgttttcactgagtttactacactggcaatgtggcatacatctcttactgc  22703800                                                                                       --------->WOX13(1)                         <----------DOF2                                             <---------ATHB12                      --------->ARR11(3)                    <-------TEIL            <-----------HVH21                      <---------ARR11(1)                  <---------ARR14(2)      <------NtERF2                     <---------CCA1(2)                    --------->ARR14(2)    --------->PCF2                   --------->YAB1                  <---------MYB52(1)<-----------------AGL3                  <---------ATHB12                <-------GAMYB<---------MYB52(1)<------NtERF2                --------->WOX13(1)              <-----------------AGL3         --------->PCF5              --------->WRKY18(1)               =======================================MADS_MADS            ----------->GT1                     <-----------------AGL2  --------->AHL20(2)   aaattgcagacaagtggtcaatcaaatcttttttagttgggcccaaaatgtctgttattggatacgttgggccttaaaatggcccccatcagtcaaaaac  22703900                  --------->HSFC1(1)                  --------->HSFB2a(2)                  <---------HSFB2a(2)                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <---------AGP1               <---------ARR14(2)               --------->ARR14(2)               --------->GLK1(2)               --------->ARR11(3)               <---------ARR11(3)              <------ZmHOX2a(1)                                   <------ZmHOX2a(2)             <---------HSFC1(2)                          ---------->DOF2    ----------->GT1             --------->HSFC1(2)                      <----------ID1 <---------HSFB2a(2)        --------->HSFB2a(2)                         <---------TOE2(3)     ---------->DOF2        <---------HSFB2a(2)                       ---------->DOF2<---------ARR11(3)    <---------ANAC46                              --------->MYB52(1)--------->HSFB2a(2)   ---------->DOF2    <---------ANAC58                        --------->YAB1       --------->ARR11(3) ---------->DOF2    <---------ANAC58                --------->MYB59 ----------->GT1 <---------HSFC1(1) <----------ID1   atcactgcttggagaaggatctagaaaaacttgcaagttagttcaaacaaaataaaggaaaaagaacgatctagaagaaagaaaaaaaaaggaaaagaaa  22704000                  <---------ALFIN1                  --------->AtMYB61               <---------ALFIN1               --------->ANAC58                           --------------->AtSPL3               --------->ANAC58                       --------->LBD16               --------->ANAC46                      --------->ANAC58             <---------ALFIN1 --------->YAB1         --------->ANAC46            --------->ARR11(3)          --------->PCF2     <---------AHL20(2)      --------->ANAC58            <---------ARR11(3)         <---------ARR14(2) --------->AHL20(2)------>ZmHOX2a(1)         --------->ZAT14         --------->ARR14(2) *TSS <-----------GT1    <---------LBD16     --------->At4g35610       <---------MYB46(3)----------->TBP------>ZmHOX2a(1) <---------ICU4<---------At4g35610   cccttatggaggttcccacaccactctatatataataacatccttctcctaaatcccgcatcagtacttctctctgctctcaagataattttgttctctc  22704100                                                    --------->SPL7                                                   --------->ATERF1(1)                                                   <------NtERF2                                                   ------>NtERF2                                                  ----------->HVH21                                                  <---------SPL7                  <------ZmHOX2a(2)                                                 <---------ANAC58                --------->ARR11(3)                                                 <---------RAP2.6(2)       <---------At4g35610                                        --------->ANAC46                   --------->At4g35610                                   --------->AGP1<---------ANAC58   <----------DOF2           <------                                   <---------ARR14(2)         --------->TOE2(3)  <---------ARR11(3)                                   --------->ARR14(2) <---------At4g35610  <---------ZAT2    <-------                  <---------ARR11(3)<------ZmHOX2a(2) --------->At4g35610  --------->ZAT2    <-------             --------->TOE2(3) <-----------GT1   <---------ANAC46  <---------ANAC58  -------->P      --------->TOE2(3)       <-----------GT1   <---------LBD16    <---------ANAC58 --------->WOX13(1)   aatttcattcttaaaccctagttcttcgattttttccgatctacgacaatggcggacgctgaaacctttgctttccaagctgagatcaaccagttgcttt  22704200                                            <---------ZAT14                                            --------->ZAT14                                            <---------ZAT18                                           <---------MYB52(1)                                       ------>ZmHOX2a(1)                                  ------>ZmHOX2a(2)                                 =============HOX2a_HOX2a                                <---------ARR14(2)                                --------->ARR14(2)                                --------->AGP1                                <-----------ARR10                                --------->ARR11(3)                                <---------ARR11(3)       <---------ICU4           <---------ARR14(3)      <---------YAB1            --------->ARR14(3)                         ------>ZmHOX2a(2)     --------->TOE2(3)         <---------GLK1(1)                          <------ZmHOX2a(2)    <---------ICU4  <---------------AGL15 --------->LBD16                --------->ARR11(3)    --------->YAB1  --------------->AGL15<---------ANAC46                <---------ARR11(3) ----DOF2          --------->ZAT6<------ZmHOX2a(2)                  <---------SPL7         <---------MYB59 --ANAC58     <----------DOF2  --------->GLK1(1)                  --------------->AtSPL3   --------->TOE2(3) --ANAC58  <---------ARR11(3) ----------->ARR10               <---------At4g35610          <---------DAG2   ccctcatcatcaataccttttactctaacaaggagatcttcctccgtgaactcatcagtaactcttctgatgtacgatctctatctctctctaccttatt  22704300                                    --------->ARR14(2)                                    <---------AGP1                                    ------->TEIL                               <-------GAMYB                              <---------MYB46(3)                              <---------SPL7               <---------TOE1(3)                             <---------ANAC46         <------MYB46(1)                       xxxxxxxxxxxxxxxx>smallRNA(i)   <------MYB83            <---------MYB52(1)<----                    <---------WOX13(1)               --------->MYB59         <-------GAMYB      -----                  --------->ATHB12  <---------ARR14(2)<---------MYB46(3)    <---------ANAC58    <----                 <---------YAB1<------NtERF2         <---------AtMYB61  <----------DOF2         <----         --------->ARR14(2)  <---------ANAC58   <---------TOE2(3)   <---------ZAT18        <---------MYB46(3)         ------->TEIL --------->ATHB12------>ZmHOX2a(2)    <---------TOE2(3)<---------ANAC58   ------         <---------ARR14(2)  <---------ANAC58   --------->MYB59    <---------ZAT6         <---------TOE2(3)        <---------CCA1(2)   <---------LBD16     <---------TOE1(3)<---------ANAC46     --------->GLK1(2)   gtatacttgtgtatctcgtttgattgatttggcggatggatctgtagatttaggtttggttagggtttagtgttctttccgttgggagaattttggttac  22704400                      --------->ZAT18                      <---------ZAT18                    --------------->AtSPL8                    <---------------AtSPL8         <---------ANAC58         <---------ANAC58 -----ANAC55(2)    <---------ANAC46            <---------ZAT6 ---->ANAC55(2)<---------DAG2                <---------ANAC46 -----ANAC58   <----------DOF2         --------->MYB59                    <---------ANAC58 -----ANAC58 --------->HSFC1(2)        <---------TOE1(3)                  <---------ANAC46 --->MYB52(2)<---------HSFC1(2)        <---------TOE2(3)--------->TOE1(2) <---------ANAC58   ttactgaagttgcgaagctttttgtgtacaaatctattgtttaggtttagtgttgataccaaggatttaagtagtttcttgttagattaccaagttttcg  22704500  Previous    Next  AGI:  At5g56020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45187.1); contains InterPro domain SFT2-like (InterPro:IPR011691) Range:  from: 22701631    to: 22703595    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g56030.1    Description:  HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8); ATP binding. Identical to Heat shock protein 81-2 (HSP81-2) [Arabidopsis Thaliana] (GB:P55737); similar to heat shock protein 81-4 (HSP81-4) [Arabidopsis thaliana] (TAIR:AT5G56000.1); similar to HSP81-1 (HEAT SHOCK PROTEIN 81-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G52640.1); similar to HSP81-3 (Heat shock protein 81-3), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56010.1); similar to Heat shock cognate protein 80 (GB:P36181); similar to hypothetical protein [Vitis vinifera] (GB:CAN62488.1); similar to molecular chaperone Hsp90-2 [Nicotiana benthamiana] (GB:AAR1 Range:  from: 22704028    to: 22706876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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