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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------
<------
<------
NtERF2
------>
NtERF2
--------->
ATERF1(2)
--------->
DREB2C(2)
--------->
RAP2.3(2)
--------->
RAP2.6(2)
--------->
RRTF1(3)
<---------
ATERF1(2)
--------->
DEAR3(1)
<-----------------------
TaNAC69(2)
--------->
RRTF1(2)
------>
ZmHOX2a(2)
--------->
RAP2.3(3)
--------->
CCA1(2)
<------
NtERF2
<------
ZmHOX2a(2)
--------->
DEAR4(2)
<---------
ARR14(3)
--------->
ERF1
--------->
GLK1(2)
--------->
RRTF1(1)
--------->
ARR11(3)
--------->
RAP2.3(1)
--------->
ARR14(3)
--------->
ATERF1(1)
<---------
AGP1
--------->
RAP2.6(1)
<---------
ARR11(3)
<---------
ATERF1(1)
<---------
ARR14(2)
--------->
AtLEC2
<---------
RAP2.3(1)
--------->
ARR14(2)
--------->
ANAC46
<---------
DEAR4(2)
----------->
ARR10
--------->
ANAC58
<---------
DEAR3(1)
<---------
YAB1
--------->
ANAC58
<---------
ABI4(2)
<---------
ZAT6
<------
ZmHOX2a(2)
--------->
ZAT18
<---------
At4g35610
--------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
LBD16
--->
DOF2
--------->
At4g35610
<---------
ARR11(3)
<-----------
ARR10
--------->
ORA47(2)
gcagataagaacccagtgagcggagagttatgaagatctgtagaaagatcagagactaagccatggaaacactgatctaagctcgagagcgccgccaaac
22542500
<---------
LBD16
--------->
WRKY38(1)
<-------
TEIL
--------->
ZAT18
--------->
CCA1(2)
--------->
ARR14(1)
<
--------->
ARR11(1)
--------->
ANAC58
--------->
ZAT2
<
<---------
ARR11(3)
----------->
TGA1
<---------
At4g35610
<
--------->
ARR14(2)
<---------
ICU4
--------->
At4g35610
-----
<---------
ARR14(2)
<---------
At4g35610
<---------
ZAT2
<--------
----------->
ARR10
--------->
At5g28300
--------->
ANAC58
<-----------
GT1
---------
--->
MYB46(3)
<---------
ZAT14
--------->
YAB1
<---------
At4g35610
<---------
GLK1(2)
---
ALFIN1
<----------
DOF2
--------->
At4g35610
--------->
At4g35610
<-----------
GT1
accaagatacgactttgactgcggtaatcagcttaagcatgacgaagacgaaatgggcatctcaaaattttcagcttagaatagatttataccgattcct
22542600
--------->
ZAT18
<---------------
AtSPL8
<------
ZmHOX2a(1)
---------
TOE1(3)
--------->
LBD16
--------->
ZAT14
<---------
ANAC46
---------
TOE2(3)
<-----------
RAV1(2)
<----------
DOF2
<------
NtERF2
---------
TOE1(2)
-------->
HAHB4
<---------
ZAT14
<---------
RAP2.3(1)
->
ZmHOX2a(1)
--------->
ATHB12
<---------
ZAT18
--------->
MYB52(1)
<----
-
ARR14(2)
<---------
ATHB12
--------->
DAG2
<---------
HSFC1(2)
<-----
>
ARR14(2)
--------->
MYB46(3)
---------->
DOF2
--------->
HSFC1(2)
<----------
ID1
<------
ZmHOX2a(2)
ctaaggtttgtacagaacaaacaaatgattcaggagaaaaaaaaagtgaactttagaagcttagaatagcggcgagaagacaaaatcgacgatcgatttc
22542700
<---------
TOE2(3)
<---------
TOE1(3)
<---------------
AGL15
--------------->
AGL15
------>
ZmHOX2a(2)
<---------
YAB1
--------->
ARR11(3)
<-----------------
AG
--------->
ARR11(3)
<---------
ARR11(3)
-----
ANAC46
>>>>>>>>>
TBF1
<-----------------
AGL1
<---------
TOE2(3)
<---------
YAB1
----
LBD16
>>>>>>>>>
TBF1
<-----------------
AGL2
--------->
MYB59
--------->
YAB1
ggagatggagaagaagaagaaaatgagttctgattaaggtaaacttggagaaaataaggtattcccatggatgatgatctctcttctctctctctctctc
22542800
<---------
AtMYB61
--------->
ANAC58
--------->
ZAT2
--------->
ANAC58
--------->
At4g35610
*
TSS
<---------
ICU4
<
--------->
ALFIN1
<----------
DOF2
<---------
ZAT18
----------->
TGA1
<-----------
RAV1(2)
<---------
At4g35610
--------->
ARR11(3)
----------->
HVH21
<-----------
HVH21
<---------
ZAT2
------------------------>
ANAC81
--------->
ANAC46
<---
---------->
DOF2
---------->
DOF2
<---------
REM1(1)
>>>>>>>>>
TBF1
--------->
ICU4
------
tctcaaagtcacaggggtttggcaaaagcagctgctttggtgaaggaagaagagagagagaagaagaaatt
gtgcaattactacgaaatgacgagaatat
22542900
<---------
GLK1(1)
<<<<<<<<<
GATA-4
----------->
GT1
<---
--------->
DAG2
======
---------->
DOF2
<-----
------->
GAMYB
<<<<<<<<<
GATA-2
--------->
MYB52(1)
<------
ZmHOX2a(2)
<------------
CBF
------>
NtERF2
<---------
WRKY12
<<<<<<<<<
GATA-3
--------->
ATHB12
--------->
ATERF1(1)
<---------
DOF5.7(2)
------>
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ATERF1(1)
<---------
WRKY38(1)
<<<<<<<<<
GATA-1
------
ZmHOX2a(1)
<---------
AHL20(2)
--------->
ALFIN1
<---------
WRKY45
<---------
ARR11(3)
------
LBD16
<-----------------
AGL3
<---------
At5g28300
--------->
DAG2
<---------
AGP1
--->
ARR11(3)
<----------
DOF2
----------->
HVH21
---------->
DOF2
--------->
ARR11(3)
caggaagttattgggccttatatgggtctttaatgggccttaaatgaccgtggccgactaaaaaaaaaagtcaacgaaaagtcaaatagatctctgtctt
22543000
<---------
DAG2
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<---------
AHL20(2)
--------->
YAB1
<---------
YAB1
-------->
ATHB1
<---------
AHL20(1)
<---------
ICU4
--------->
AHL20(1)
--------->
ATHB12
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<---------
CCA1(2)
--------->
GLK1(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
--------->
HSFB2a(2)
------
AHL20(2)
--------->
O2
<---------
TOE2(3)
<---------
HSFB2a(2)
=========================
bZIP_DOF
--------->
TOE1(3)
--------->
HSFB2a(2)
<-----
-----
DOF2
--------->
TGA1a
*
TSS
--------->
TOE2(3)
<---------
HSFB2a(2)
<---------
WOX13(1)
ttatttttttgttctctctcgtctctctggct
accgagaaaacagagaacgttaagaatcattgcttttctcgagaaaataatatttttaattgaatcga
22543100
--------->
ANAC46
------
<---------
ANAC55(2)
<---------
ATHB12
--------->
CCA1(2)
<---------
ICU4
<-----
<---------
TOE2(3)
<---------
WOX13(1)
<------
MYB83
--------->
TOE1(3)
--------->
ANAC58
--------->
ATHB12
<------
MYB46(1)
---------->
DOF2
--------->
TOE2(3)
--------->
ANAC58
<---------
YAB1
--------->
ZAT2
----
HSFB2a(2)
<-----------
GT1
--------->
CCA1(2)
--------->
ICU4
<---------
ZAT2
gaaactcttcaaagttgaattaagaagaatattacctcaattgagatttgagagacacgcatagagagattgattattgcatcgaatcaagcttggtttg
22543200
-----
<----
-----
------
------
-------
<------
NtERF2
-------
-------
<-------
<-------
------>
NtERF2
--------
---------
---------
---------
---------
<--------
<--------
---------
<--------
---------
---------
---------
--------->
ATERF1(1)
--------->
RRTF1(1)
--------->
ORA47(2)
--------->
RAP2.6(1)
--------->
RAP2.3(1)
--------->
ERF1
--------->
DEAR4(2)
------>
NtERF2
--------->
At4g35610
<---------
At4g35610
--------->
LBD16
<---------
ATERF1(1)
--------->
ABI4(1)
--------->
DEAR3(1)
--------->
ANAC46
------>
NtERF2
<---------
ATERF1(1)
<------
NtERF2
--------->
GLK1(1)
--------->
DEAR3(1)
--------->
LBD16
------>
ZmHOX2a(2)
<---------
ALFIN1
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
At4g35610
<---------
ALFIN1
<---------
ANAC58
<---------
AGP1
--------->
At4g35610
--------->
ATERF1(1)
<---------
ANAC46
--------->
ARR11(3)
<---------
ATHB12
--------->
ATERF1(1)
<---------
LBD16
--------->
AGP1
--------->
TOE2(3)
--------->
ANAC46
------>
NtERF2
<---------
ICU4
<---------
ARR11(3)
<---------
ALFIN1
--------->
LBD16
--->
MYB52(2)
--------->
ARR14(2)
--------->
ZAT14
<---------
ATERF1(1)
----
MYB46(3)
<----------
DOF2
<---------
GLK1(1)
--------->
ZAT14
<---------
LBD16
<--
ttagta
atggcgggaatagctttagttttagatctactgaagaaatctcaatctaagaacactctccactcatcttccttctattccgcctccgccgccg
22543300
--------->
RAP2.3(1)
--------->
ORA47(2)
<---------
At4g35610
<---------
ATERF1(1)
<---------
ZAT2
----------->
RAV1(2)
<---------
At4g35610
--------->
At4g35610
--------->
ZAT2
<-----------
RAV1(1)
->
NtERF2
--------->
ATERF1(1)
-----
At4g35610
---->
At4g35610
--->
RAP2.3(2)
--->
DEAR3(1)
-->
RAP2.3(1)
-->
ATERF1(1)
-->
DEAR4(2)
--
ATERF1(1)
--
RAP2.3(1)
->
ABI4(1)
--------->
ATERF1(2)
>
RAP2.3(3)
>
ATERF1(2)
>
RRTF1(3)
--------->
RAP2.6(2)
>
DEAR3(1)
--------->
RAP2.3(2)
-
ATERF1(2)
--------->
At4g35610
-
ALFIN1
------>
NtERF2
<----------
DOF2
>
RRTF1(2)
--------->
DEAR3(1)
-
DEAR3(1)
<---------
ATERF1(2)
--------->
ARR14(2)
>
ANAC46
--------->
At4g35610
<---------
ANAC58
<--------
P
<---------
ARR14(2)
>
RAP2.3(2)
<------
NtERF2
<---------
ANAC58
<---------
MYB52(1)
<---------
ANAC46
<-
>
RAP2.6(2)
------>
NtERF2
<---------
ANAC46
<---------
ANAC46
<---------
ZAT14
--
--------
DOF2
<---------
At4g35610
<---------
LBD16
--------->
ZAT14
<----------
DOF2
ctgtttctgctgccgcctctgctccttttgcgtctaggtttctcttcgg
gtatgtattctctctctctgtagtggatttggatttgttttgactttcact
22543400
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AGI:
At5g55600.1
Description:
agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein. similar to agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G68580.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO45102.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025)
Range:
from: 22539075
to: 22542871
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g55610.1
Description:
similar to unknown [Populus trichocarpa] (GB:ABK94457.1)
Range:
from: 22543033
to: 22545336
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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