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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(1)
<---------
AHL20(2)
<---------
YAB1
--------->
TOE2(3)
<---------
ICU4
----
------>
ZmHOX2a(1)
<-----------
GT1
--------->
AHL20(1)
<---------
YAB1
<----
<---------
ICU4
<----------
DOF2
--------->
TOE2(3)
<---------
AHL20(1)
<---------
ARR11(3)
<----
------>
ZmHOX2a(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
-----
--
GT1
--------->
ZAT6
<---------
AHL20(2)
<-----------
GT1
----------->
GT1
---------->
DOF2
attgatccttacagtatttctttgaatttttttatccttacaaatgttaccaaaaaatattaatttgtaagaagataattacaaacaaaagaaatgcaat
22536700
<-
--------
--------
<---------
ICU4
<-------
--------->
DAG2
--------->
ICU4
--------->
GLK1(1)
---------->
DOF2
--------->
AHL20(2)
--------->
CCA1(2)
----------->
GT1
<---------
AHL20(2)
--------->
ANAC55(2)
--------->
ARR14(2)
----->
YAB1
----------->
GT1
----------->
GT1
<------
ZmHOX2a(1)
<---------
AHL20(2)
---
-----
ATHB12
--------->
DAG2
--------->
ANAC58
--------->
AHL20(1)
<---------
ANAC55(2)
<---------
ARR14(2)
-----
YAB1
<---------
TOE2(3)
--------->
AHL20(2)
----------->
GT1
--------->
AHL20(2)
<-----
---->
ICU4
---------->
DOF2
--------->
ANAC58
--------->
AHL20(2)
<-----------
GT1
<------
ZmHOX2a(1)
gataaacaaaaaaaaaaaaaaggttaaaaagcgcaaacaaaaaaaatagaaattaattgtgaggataaatattacataattttatcttggaggatatgta
22536800
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
ARR11(3)
--------
ICU4
--------->
YAB1
->
ANAC55(2)
--------->
ANAC58
--->
GT1
<---------
AHL20(2)
--
ANAC55(2)
--------->
ANAC58
--------->
ICU4
<---------
YAB1
<-------
TEIL
------>
ICU4
--------->
YAB1
<---------
At4g35610
<---------
TOE2(3)
-
----
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
ICU4
<------
ZmHOX2a(1)
-
atttttattttttttattttgataagcatgatatatataatggagatgatggtaatgtttatgtttgaggaagttaagagctacatagagaggctccaag
22536900
<----------
DOF2
---------->
DOF2
--------->
ANAC46
--------->
YAB1
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
--------->
ANAC58
--------->
YAB1
--------->
TOE2(3)
-------->
AHL20(2)
--------->
ANAC46
---------->
DOF2
--------->
YAB1
<---------
ANAC55(2)
-------->
ICU4
<----------
DOF2
<-----------
HVH21
----------->
RAV1(1)
----------->
GT1
tatttattaaactcatctttctcacacgacctttcacctccaaagactcccaacaaaaatcataataaagaaatacaaaaacgtaaactttgccaagttt
22537000
===========
--------->
ANAC58
----------->
GT1
--------->
ANAC46
<---------
ANAC58
--------->
ANAC58
<---------
ANAC58
--------->
ANAC46
--------->
AtMYB61
--------->
ARR14(2)
<---------
ZAT14
--------->
TGA1a
<---------
ARR14(2)
<---------
ZAT18
--------->
bZIP60(2)
--------->
ANAC46
--------->
ZAT14
--------->
O2
<-----------
GT1
--------->
ANAC58
--------->
LBD16
--------->
ZAT2
<----------
DOF2
--------->
LBD16
<-----------
GT1
------>
NtERF2
<----------
DOF2
<---------
TOE1(2)
--------->
TOE1(3)
<---------
HSFB2a(2)
--------->
ANAC46
<-----------
GT1
--------->
ZAT6
--------->
ANAC58
--------->
TOE2(3)
--------->
HSFB2a(2)
<---------
ALFIN1
ttttttcttcctttctttaactctctcactcccacgaattcgtgagaagaaaccttaaaacgttttttttccagagcacgaaaaaactccccacctcact
22537100
<---------
MYB52(1)
<------
NtERF2
<-----------
RAV1(2)
--------->
LBD16
<---------
ANAC58
------>
NtERF2
<---------
ANAC58
--------->
ANAC46
<-----------
GT1
<----------
DOF2
<----------
DOF2
<----------
DOF2
<------
ZmHOX2a(1)
<---------
HSFC1(2)
<---------
DAG2
<---------
At4g35610
---------->
DOF2
<---------
LBD16
----
============
bZIP_DOF
<---------
ICU4
--------->
HSFC1(2)
<---------
AHL20(2)
<---------
YAB1
taaacttttttccttgtgcaggagacatcattcccc
atgaaagtcgaagcttttattcccgccgttttattgctctgttttggggtaatgttatgtttaa
22537200
--------->
YAB1
<---------
ICU4
----------->
GT1
<------
MYB46(1)
--------->
ANAC55(2)
--------->
CCA1(2)
<------
MYB83
--------->
ARR11(3)
<---------
ANAC55(2)
<---------
ARR11(3)
--------->
MYB59
--------->
At4g35610
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ARR14(2)
<-------
GAMYB
<---------
ATHB12
<---------
HSFB2a(1)
<---------
ANAC58
--------->
ICU4
<---------
ANAC55(2)
<---------
ANAC58
<---------
ATHB51
--------->
ANAC55(2)
<---------
HSFB2a(2)
--------->
ZAT18
--------->
YAB1
--------->
AHL20(2)
--------->
HSFB2a(2)
------>
DOF2
<---------
ARR14(2)
<---------
ICU4
----------->
ARR10
aaagctcgtgtgcgttgcagataggtaacaataatgagttgaagaattacataagttgggaagatttgagagttgtggaagatggaagaatagagagaag
22537300
--------->
TOE1(2)
--------->
O2
===========================
MYC_MYB
<---------
DOF5.7(2)
===========================
bZIP_DOF
---------->
DOF2
<---------
ANAC58
--------->
DOF5.7(2)
<---------
ANAC46
--------->
ANAC58
<---------
O2
--------->
ZAT6
=============================
MYC_MYB
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
--------->
TGA1a
<---------
MYB52(2)
--------->
ANAC58
===========================================
MYC_MYB
----------->
GT1
<---------
ANAC58
<---------
DOF5.7(2)
<---------
TGA1a
<--------
P
<---------
ANAC58
--------->
MYB52(1)
<---------
TOE2(3)
<---------
WOX13(1)
--------->
MYB59
--------->
DOF5.7(2)
<---------
MYB52(2)
<-------
GAMYB
--------->
YAB1
------->
GAMYB
--------->
TOE1(3)
--------->
MYB52(1)
<---------
MYB46(3)
<------
ZmHOX2a(1)
--------->
TOE2(3)
--------->
ANAC58
<---------
TOE2(3)
<---------
TOE2(3)
--------->
MYB46(3)
--------->
ANAC46
<---------
YAB1
<--
<----------
DOF2
--------->
ATHB12
--------->
ANAC58
--------->
SPL7
--------->
ATHB12
--------->
MYB52(1)
ttttagcattaaggagaatagtaattgggtaaccacaaacgctaacgctaacgcgaacgctactaacgtgagaagagtgattgtggttgataaaaacgga
22537400
--------->
ANAC46
----------
<---------
TOE1(2)
--------->
GLK1(2)
--------->
LBD16
<---------
GLK1(2)
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ANAC55(1)
--------->
ARR14(2)
------>
ZmHOX2a(1)
<---------
ARR11(3)
--------->
GLK1(1)
----------->
ARR10
<---------
MYB46(3)
----------->
GT1
<---------
LBD16
<------
ZmHOX2a(1)
<---------
At4g35610
----------->
GT1
--------->
TOE1(2)
----
ZmHOX2a(1)
--------->
At4g35610
<---------
ZAT6
----------->
RAV1(2)
ggaggagattctgttacagttcaaggagctgttgatatggttcctgattccaattcacagagagttaaaatcttcattcttcctgggatttacag
gtaac
22537500
--
--------->
CCA1(2)
<---------
ANAC46
<-
--------->
ARR11(3)
<----------
DOF2
--------->
ALFIN1
---
---------->
DOF2
<-----------
GT1
--------->
ALFIN1
------
->
GT1
<---------
ARR11(3)
---------->
ID1
<---------
YAB1
<----------
DOF2
<-------
ttacaaaaaaagatttaagacataaaccgtgtttgtttttttctttgtatgttattaatctttgagaaacgtctttgggagtgtggggttttgtttccga
22537600
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AGI:
At5g55590.1
Description:
QRT1 (QUARTET 1); pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74384.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050)
Range:
from: 22537137
to: 22539084
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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