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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                         <---------AHL20(2)
                                                        --------->AHL20(2)
                                 ------>ZmHOX2a(1)      <---------AHL20(2)
                              <---------YAB1          --------->TOE2(3) <---------ICU4          ----
    ------>ZmHOX2a(1)        <-----------GT1        --------->AHL20(1) <---------YAB1          <----
  <---------ICU4<----------DOF2 --------->TOE2(3)   <---------AHL20(1)<---------ARR11(3)       <----
  ------>ZmHOX2a(2)     --------->AHL20(2)       --------->AHL20(2)   --------->ARR11(3)       -----
--GT1  --------->ZAT6   <---------AHL20(2) <-----------GT1          ----------->GT1---------->DOF2
 
attgatccttacagtatttctttgaatttttttatccttacaaatgttaccaaaaaatattaatttgtaagaagataattacaaacaaaagaaatgcaat  22536700
                                                                                                  <-
                                                                                            --------
                                                                                            --------
                                                                 <---------ICU4             <-------
                        --------->DAG2                          --------->ICU4            --------->GLK1(1)
                       ---------->DOF2           --------->AHL20(2)                       --------->CCA1(2)
                  ----------->GT1                <---------AHL20(2)   --------->ANAC55(2)--------->ARR14(2)
----->YAB1       ----------->GT1           ----------->GT1 <------ZmHOX2a(1) <---------AHL20(2)  ---
-----ATHB12     --------->DAG2 --------->ANAC58  --------->AHL20(1)   <---------ANAC55(2)<---------ARR14(2)
-----YAB1       <---------TOE2(3)     --------->AHL20(2)  ----------->GT1   --------->AHL20(2)<-----
---->ICU4     ---------->DOF2  --------->ANAC58 --------->AHL20(2)  <-----------GT1     <------ZmHOX2a(1)
 
gataaacaaaaaaaaaaaaaaggttaaaaagcgcaaacaaaaaaaatagaaattaattgtgaggataaatattacataattttatcttggaggatatgta  22536800
          <---------AHL20(2)
     <---------AHL20(2)
 <---------AHL20(2)
<---------YAB1            <---------ARR11(3)
--------ICU4          --------->YAB1
->ANAC55(2)         --------->ANAC58
--->GT1  <---------AHL20(2)
--ANAC55(2)         --------->ANAC58      --------->ICU4 <---------YAB1       <-------TEIL
------>ICU4     --------->YAB1          <---------At4g35610    <---------TOE2(3)                   -
----AHL20(2)   <---------YAB1    <---------AHL20(2)--------->ICU4<------ZmHOX2a(1)                 -
 
atttttattttttttattttgataagcatgatatatataatggagatgatggtaatgtttatgtttgaggaagttaagagctacatagagaggctccaag  22536900
                           <----------DOF2                    ---------->DOF2
                      --------->ANAC46                     --------->YAB1
                      --------->ANAC58                    <---------YAB1
<---------AHL20(2)    --------->ANAC58                  --------->YAB1        --------->TOE2(3)
-------->AHL20(2)   --------->ANAC46 ---------->DOF2 --------->YAB1          <---------ANAC55(2)
-------->ICU4<----------DOF2<-----------HVH21  ----------->RAV1(1)           ----------->GT1
 
tatttattaaactcatctttctcacacgacctttcacctccaaagactcccaacaaaaatcataataaagaaatacaaaaacgtaaactttgccaagttt  22537000
                                                                                         ===========
                                                                          --------->ANAC58
                                                                          ----------->GT1--------->ANAC46
                                    <---------ANAC58                      --------->ANAC58
                                    <---------ANAC58                      --------->ANAC46--------->AtMYB61
                                 --------->ARR14(2)                    <---------ZAT14   --------->TGA1a
                                 <---------ARR14(2)                    <---------ZAT18   --------->bZIP60(2)
                              --------->ANAC46                         --------->ZAT14   --------->O2
              <-----------GT1 --------->ANAC58                      --------->LBD16      --------->ZAT2
           <----------DOF2   --------->LBD16                    <-----------GT1         ------>NtERF2
       <----------DOF2       <---------TOE1(2)   --------->TOE1(3) <---------HSFB2a(2) --------->ANAC46
<-----------GT1 --------->ZAT6--------->ANAC58   --------->TOE2(3) --------->HSFB2a(2) <---------ALFIN1
 
ttttttcttcctttctttaactctctcactcccacgaattcgtgagaagaaaccttaaaacgttttttttccagagcacgaaaaaactccccacctcact  22537100
                                                            <---------MYB52(1)
                                                         <------NtERF2
              <-----------RAV1(2)                       --------->LBD16
        <---------ANAC58                                ------>NtERF2
        <---------ANAC58                               --------->ANAC46
     <-----------GT1                          <----------DOF2<----------DOF2
 <----------DOF2 <------ZmHOX2a(1)          <---------HSFC1(2)
 <---------DAG2 <---------At4g35610---------->DOF2    <---------LBD16                           ----
============bZIP_DOF    <---------ICU4      --------->HSFC1(2)<---------AHL20(2)         <---------YAB1
 
taaacttttttccttgtgcaggagacatcattccccatgaaagtcgaagcttttattcccgccgttttattgctctgttttggggtaatgttatgtttaa  22537200
                            --------->YAB1
                            <---------ICU4
                   ----------->GT1
                   <------MYB46(1)
                   --------->ANAC55(2)                      --------->CCA1(2)
                   <------MYB83                            --------->ARR11(3)
                   <---------ANAC55(2)                     <---------ARR11(3)
                  --------->MYB59--------->At4g35610       --------->ARR14(2)
                --------->ARR14(2)                         <---------ARR14(2)
         <-------GAMYB     <---------ATHB12               <---------HSFB2a(1)
        <---------ANAC58   --------->ICU4    <---------ANAC55(2)
        <---------ANAC58   <---------ATHB51  --------->ANAC55(2)       <---------HSFB2a(2)
       --------->ZAT18   --------->YAB1    --------->AHL20(2)          --------->HSFB2a(2)
------>DOF2     <---------ARR14(2)      <---------ICU4   ----------->ARR10
 
aaagctcgtgtgcgttgcagataggtaacaataatgagttgaagaattacataagttgggaagatttgagagttgtggaagatggaagaatagagagaag  22537300
                                                               --------->TOE1(2)
                                                              --------->O2
                                                              ===========================MYC_MYB
                                             <---------DOF5.7(2)
                                             ===========================bZIP_DOF
                                             ---------->DOF2  <---------ANAC58
                                           --------->DOF5.7(2)<---------ANAC46
                                         --------->ANAC58     <---------O2
                                         --------->ZAT6       =============================MYC_MYB
                                         --------->ANAC58     <---------ANAC58
                                   --------->ANAC58           --------->TGA1a
                               <---------MYB52(2)    --------->ANAC58
                             ===========================================MYC_MYB     ----------->GT1
                       <---------ANAC58<---------DOF5.7(2)    <---------TGA1a     <--------P
                       <---------ANAC58--------->MYB52(1)    <---------TOE2(3)    <---------WOX13(1)
                      --------->MYB59--------->DOF5.7(2)  <---------MYB52(2)     <-------GAMYB
               --------->YAB1------->GAMYB--------->TOE1(3) --------->MYB52(1)  <---------MYB46(3)
         <------ZmHOX2a(1)   --------->TOE2(3)       --------->ANAC58          <---------TOE2(3)
       <---------TOE2(3)    --------->MYB46(3)       --------->ANAC46          <---------YAB1    <--
   <----------DOF2--------->ATHB12 --------->ANAC58 --------->SPL7        --------->ATHB12--------->MYB52(1)
 
ttttagcattaaggagaatagtaattgggtaaccacaaacgctaacgctaacgcgaacgctactaacgtgagaagagtgattgtggttgataaaaacgga  22537400
                                                                                          --------->ANAC46
                                                                                          ----------
                                                                                <---------TOE1(2)
    --------->GLK1(2)                                                          --------->LBD16
   <---------GLK1(2)                                                           ------>ZmHOX2a(1)
   <---------ARR14(2)                                            --------->ARR11(3)       --------->ANAC55(1)
   --------->ARR14(2)                   ------>ZmHOX2a(1)        <---------ARR11(3) --------->GLK1(1)
 ----------->ARR10       <---------MYB46(3)                ----------->GT1    <---------LBD16
<------ZmHOX2a(1)      <---------At4g35610                ----------->GT1     --------->TOE1(2)
----ZmHOX2a(1)         --------->At4g35610                <---------ZAT6     ----------->RAV1(2)
 
ggaggagattctgttacagttcaaggagctgttgatatggttcctgattccaattcacagagagttaaaatcttcattcttcctgggatttacaggtaac  22537500
                                                                                                  --
         --------->CCA1(2)                                                        <---------ANAC46<-
        --------->ARR11(3)             <----------DOF2                         --------->ALFIN1  ---
    ---------->DOF2                 <-----------GT1                          --------->ALFIN1 ------
->GT1   <---------ARR11(3)     ---------->ID1     <---------YAB1     <----------DOF2        <-------
 
ttacaaaaaaagatttaagacataaaccgtgtttgtttttttctttgtatgttattaatctttgagaaacgtctttgggagtgtggggttttgtttccga  22537600
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AGI:  At5g55590.1   
Description:  QRT1 (QUARTET 1); pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74384.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050)
Range:  from: 22537137    to: 22539084    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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