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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                        <---------AHL20(2)
                                                                                     --------->WOX13(1)
                                                                       <---------AHL20(2)
                                                                    <---------AHL20(1)  --------->AHL20(2)
                    --------->AHL20(2)                <---------AHL20(2)          >>>>>>>>>MYB2
           --------->YAB1            --------->ARR11(3)             --------->ARR11(3)  <---------AHL20(1)
          <---------YAB1<---------ICU4                --------->AHL20(2)    --------->HSFB2a(2)
      <<<<<<<<<GATA-1<---------AHL20(2)   ---------->DOF2           <---------ARR11(3)  --------->AHL20(1)
   <---------AHL20(2)<---------ICU4  <---------ARR11(3)             --------->AHL20(1) <---------ATHB12
---------GT1        <---------ATHB12 --------->GLK1(2)--------->AHL20(1)    <---------HSFB2a(2)   --
 
ttacaatttatctatgataactaataaatattgcatagaaaatctaaaagaatcaaattttttaaaacaaatattttttttagaaaaccaattaattaag  22530400
                                                                                                  <-
                                                                                               -----
                                                                                               -----
                                                       ----------->GT1                         <----
                             ---------->DOF2    ---------->DOF2                     <---------SPL7<-
                        ----------->GT1      --------->TOE2(3)                  <-----------RAV1(1)
--------->MYB52(1)  ---------->DOF2    <---------YAB1 ----------->GT1         <----------DOF2  -----
------->DEAR3(2) <----------DOF2       <---------AHL20(2) <---------AHL20(2)<---------YAB1     <----
 
aacagacggagtaatgtattctttaaagtgtttaaagagaatattatttcttaaagaatgttaaattgttagaaaacttatctttgtgggacgaagaaaa  22530500
      <----------DOF2
   <---------AHL20(2)                                                                       <-------
<---------AHL20(2)                                                             <---------ARR11(3)
--------YAB1                                                                   --------->ARR11(3)
---->AHL20(1)                                                    --------->ANAC58           <-------
---->ARR11(3)                                        --------->TOE2(3)         <-----------ARR10
-----ARR11(3)             ----------->GT1            <----------DOF2        <---------GLK1(2)
--------AHL20(2)          <---------ZAT6             --------->TOE1(3)  ---------->DOF2     <-------
---->ICU4      --------->DAG2                 --------->TOE2(3)  --------->ANAC58      <----------DOF2
-----AHL20(1) ---------->DOF2               <-------TEIL       ---------->DOF2--------->RVE1(1)  <--
 
tattattttcttttaaaaaaagttttgtattgttaaatctaaacatatacatcaaactttaaaaatcaaagcaaaaaaagaatatctctccttttgcatg  22530600
                                                                                                 <--
                                       ----------->GT1                                 xxxxxxxxxxxxx
                             --------------->AGL15                                  <---------ARR14(2)
                             <---------------AGL15         --------->ATHB12         --------->ARR14(2)
--AtLEC2      <---------AHL20(2)      <---------ARR11(3)  --------->ICU4        --------->DAG2   <--
--ANAC58     --------->AHL20(2)       --------->ARR11(3)  <---------YAB1       ---------->DOF2   <--
--ANAC58 <---------AHL20(2) --------->TOE2(3)           --------->YAB1   ----------->GT1        <---
--------DOF2 <---------AHL20(2)     <---------TOE2(3)  <-------TEIL   --------->MYB52(1)        <---
 
cttttgacatattgaatttaatagctaattttcttaattaagatgttaaacttatggattcatgatttgaacaaaactgaaaaaaagtatatggaagcgt  22530700
                                             --------->YAB1
                                        ------->GAMYB
                                      ------>MYB46(1)
                                      ------>MYB83
                                      -------->P
                                      --------->MYB52(1)
                                     --------->MYB55(1)
                                     --------->MYB52(1)
                                    <---------MYB55(2)
                                    --------->MYB46(3)
     <-------TEIL                   <---------MYB46(2)
-------MYB46(3)                     --------->AtMYB61                           --------->TOE2(3)
xxxxxxxxx>smallRNA(le3)             <---------MYB111(2) --------->MYB46(3)      --------->YAB1
----MYB83                           --------->DEAR3(1)  <---------MYB55(2)   <----------DOF2       <
----MYB46(1) ------>MYB46(1)    <------ZmHOX2a(2)      ------>MYB46(1)  <<<<<<<<<TBF1             --
------DEAR3(1) --------->YAB1 <------ZmHOX2a(1)        ------>MYB83 <-----------GT1              <--
------AtMYB61------>MYB83 ---------->DOF2    ----------->GT1      <---------AHL20(2)         <------
 
tggtgagattcatacctatcaaaatgaacaaaaggatcaccaaccgaatagtaaaaccaactactgtattttttcttcttctttcttaatttctctcttt  22530800
                                                                             <---------MYB52(2)
                                                                             --------->MYB46(3)
                                                                           ----------->RAV1(1)
                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                        --------->ANAC55(2)
                                                                        --------->ANAC58
                                                                        --------->ANAC46
                                                                     <---------SPL7
                                                                    --------->ALFIN1    --------->YAB1
                        --------->TOE2(3)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        --------->YAB1                             <---------------AtSPL8     ------
             <---------AHL20(2)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
             *TSS       --------->TOE1(3)                          <---------------AtSPL3<---------AHL20(2)
      ----------->GT1 <---------ARR11(3)                          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
---------AHL20(2) --------->YAB1        ---------->DOF2         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
------->AHL20(2) <---------YAB1        <---------AHL20(2)    --------->CCA1(2)     ------------>CBF
-------YAB1  --------->AHL20(2)      <-----------TBP  ------>ZmHOX2a(1) --------->ANAC58--------->AHL20(2)
----DOF2     --------->YAB1   <-----------RAV1(1)    --------->TOE2(3) --------->ZAT18 <---------ATHB12
 
attaaaaatttgttaattatatcataatcttaactgttgtatataaagtatttcttcctaaaatatacaaggtgtacgcaacaaatgccaataaaaatgg  22530900
                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                 --------->TOE1(3)            --------->AHL20(2)
                                 --------->TOE2(3)        ----------->GT1
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<----------DOF2
                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------DAG2
                 --------->AtMYB61 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------------->AGL15
       ---------->DOF2          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
    --------->AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
    <---------AHL20(2)         ------->TEIL        <---------------AGL15                    <-------
----->GT1  ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <-----------GT1  <---------ARR11(3)
 
tttcaaattaaaaagaaagaccaaaactcatatgaacctcaaaaacatagtatgctacttttagttaaaataaactttctcatttcaagttctatttttt  22531000
                                                                              <------ZmHOX2a(2)
                                                  <-----------GT1            <---------ARR11(3)
                           --------->ANAC58       <---------AHL20(2)       --------->ANAC58
                           --------->ANAC58  <---------YAB1          <-----------HVH21  <xxxxxxxxxxx
                          --------->DAG2   ----------->GT1          --------->YAB1---------->DOF2
       <---------MYB52(1)---------->DOF2<------ZmHOX2a(1)   <-----------------------TaNAC69(2)  <xxx
--AHL20(2)    <---------YAB1          <---------TOE2(3)   ----------->HVH21--------->ANAC58     ----
 
ttgtcattcgcttagttattaatgctcaaaaagccatttctgaggattgttatttacataagtgacatgaagcatcacacgatctaaaagctgttagaac  22531100
                                     ----------->GT1               --------->bZIP60(2)
                                    --------->ANAC58             <---------bZIP60(2)
                                ------->GAMYB                 ----------->HVH21
                  --------->YAB1--------->ANAC46            --------->YAB1
            --------->YAB1     --------->MYB46(3)           <---------ICU4
  <xxxxxxxxxxxxxxxxsmallRNA(i)<---------At5g28300         -------->P<-----------HVH21
  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  ------->GAMYB                    --------->ZAT6
xxxxxxxxxxxxsmallRNA(l2)      -------->P                --------->MYB46(3)           <---------At4g35610
xxxxxxxxxxxxxxxxxsmallRNA(s2)--------->MYB52(1)         <---------MYB111(2)    <---------REM1(1)----
------->RAV1(1)  <---------ATHB12   --------->ANAC58    <---------MYB55(2)    <---------------AtSPL3
 
cacatacgaaggcaaacacaatcactatgtactaaccgcaaggtataacaacaacaacaacaaccatgacatgtcagactagttgtaccgctaacacaat  22531200
                                                                                   --------->LBD16
                                                                                   <xxxxxxxxxxxxxxxx
                                                                               <---------ARR14(2)
                                                                             --------->LBD16
                                                                            --------->ANAC46
                                                                         --------->ARR14(2)
                                    <---------WRKY18(1)                  <---------ARR14(2)
                                   --------->WRKY38(1)              --------->At4g35610
                                   --------->WRKY12                 <---------At4g35610
                                   ----------->HVH21               --------->ARR14(2)
                             <---------ALFIN1                      <---------ARR14(2)  <xxxxxxxxxxxx
                          ----------->HVH21               XXXXXXXXXXXXXXXXXXXX>MIR2112-3P
                        --------->At4g35610               <---------ALFIN1 <---------LBD16
--------->TOE2(3)       <---------At4g35610 --------->TOE2(3)   <---------ALFIN1 <---------LBD16
----->YAB1 --------->ALFIN1 --------->SPL7 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->ARR14(2)
 
cagcctcaacttaggtgttgaaatcgcatcggacacccttgaccatacatcaaacgagcatccacatccacatctgcatccgcatccgcattcacatcgt  22531300
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AGI:  At5g55565.1   
Description:  Encodes a defensin-like (DEFL) family protein.
Range:  from: 22527243    to: 22530814    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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