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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-
-
-
---------->
DOF2
<-
<-----------
RAV1(1)
--
------->
GAMYB
--
<---------
TOE2(3)
<---------
YAB1
---
--------
YAB1
<------------
AtMYB77
<---------
YAB1
<----
---------
GT1
<-----------
GT1
<---------
DAG2
--------->
TOE1(3)
------->
TEIL
------>
ZmHOX2a(1)
---->
ICU4
<-----------
GT1
----------->
GT1
--------->
TOE2(3)
<---------
CCA1(2)
-----
tttcatttttaagtttttaactgtcgctatgaaagtgaaaaccttttgattacaaaccttacatgcttcacaatttcaattgtatctctattaatcct
ag
22411400
------->
GAMYB
<---------
ALFIN1
----------->
RAV1(1)
------>
MYB83
------>
MYB46(1)
-------->
ANAC58
--------->
ANAC46
-----------
-------->
ANAC46
--------->
MYB46(3)
<---------
ICU4
--------->
ANAC58
-------->
ANAC58
<---------
MYB55(2)
<--------
HAHB4
--------->
ANAC58
--------
LBD16
--------->
ANAC58
--------->
YAB1
<---------
GLK1(2)
------->
LBD16
--------->
ANAC58
--------->
ATHB12
--------->
ARR14(2)
---->
NtERF2
--------->
ANAC46
<---------
ATHB12
<---------
ARR14(2)
------>
DEAR3(1)
<---------
ALFIN1
--------->
WOX13(1)
----------->
ARR10
-----
ZAT2
<---------
ALFIN1
<-----------
GT1
<---------
ARR11(3)
---->
ZAT2
<-----------
GT1
--------->
ANAC55(1)
--------->
TOE2(3)
--------->
ARR11(3)
<----
ccgcgcaatctcatcaattctccacacccaacacacttaatagtttttttttacatcaatcatttcgaaaccacaagttcttagatactcaacaacattt
22411500
--------->
ARR14(2)
<---------
ARR14(2)
<---------------
AGL15
----------->
HVH21
<------
ZmHOX2a(2)
--------------->
AGL15
--------->
CCA1(2)
<---------
ARR11(3)
============================================
<-----------
GT1
--------->
ARR11(3)
<-----------------
AGL2
<---------
GLK1(1)
>
RAV1(1)
---------->
DOF2
<-----------------
AGL3
--------->
GLK1(1)
-----
AHL20(2)
<---------
ATHB12
<-----------
GT1
<---------
TOE2(3)
<-----
ttttttttttttctgtagccaatcgatgttctaaagatcaagaatgttgtattatttctaccacttatggagtcaccaaggatatgtgaagggttttctt
22411600
<---------
ANAC58
<---------
ANAC46
--------->
ARR11(3)
<---------
YAB1
<---------
ARR14(2)
<---------
AHL20(2)
<---------------
AGL15
--------->
AHL20(2)
--------------->
AGL15
<---------
AHL20(2)
<-----------------
AGL3
<--------
<---------
AHL20(2)
----------------->
AGL3
--------->
YAB1
--------->
YAB1
<---------
AHL20(1)
==============================
MADS_MADS
<---------
YAB1
--------->
AHL20(1)
<------
ZmHOX2a(1)
--------->
GLK1(2)
------>
ZmHOX2a(2)
--------->
GLK1(1)
--------->
AHL20(2)
<---------
ANAC58
--------------->
AGL15
--------->
ARR14(2)
<---------
GLK1(1)
==================================================
MADS_MADS
--------->
GLK1(1)
<---------
TOE2(3)
-----
DOF2
<---------
AHL20(2)
--------->
At4g35610
----------->
ARR10
<---------
GLK1(2)
<---
tgtttatatatttttttaattgcgttttaggacatctccaatagaagtatctaaatgtagatactgatctctatcaaaacagattatggatatcatacta
22411700
<---------
TOE1(3)
<-----------
GT1
--------->
MYB52(1)
----------->
TBP
<-
--------->
ANAC58
--------->
AHL20(2)
--------
<---------
ANAC58
--------->
ANAC46
--------->
TOE2(3)
<-------
--------->
AHL20(2)
--------->
ARR11(3)
--------->
ANAC58
--------->
TOE1(3)
<-------
--------->
TOE2(3)
<---------
ARR11(3)
<---------
TOE2(3)
<----------
DOF2
--------
<-------
TEIL
<---------
ANAC58
--------->
ARR11(3)
------->
TEIL
--------->
ANAC55(2)
--------->
AHL20(2)
-
YAB1
--------->
YAB1
<---------
GLK1(2)
<---------
DOF5.7(2)
<---------
ANAC58
--------->
YAB1
------------
AtSPL8
<---------
TOE2(3)
--------->
DOF5.7(2)
<---------
ANAC58
------->
GAMYB
<-
gagtacattaaaaatttgcttctaagattttgagttcttggagtcattaacgcatcgctaagggtattttcgtaactttaaataaccccaaataatattt
22411800
<---------
ARR14(2)
--------->
ARR14(2)
<------
NtERF2
--------->
LBD16
--------->
RAP2.6(2)
<---------
LBD16
--------->
ANAC58
<---------
DEAR3(2)
--------->
ANAC58
------>
NtERF2
--------->
LBD16
<---------
SPL7
--------->
DAG2
------>
ZmHOX2a(1)
<---------
DEAR3(1)
--------->
AHL20(1)
--------
ANAC58
<---------
MYB52(1)
<---------
AHL20(1)
<<<
->
AHL20(1)
<-----------
GT1
--------->
ATERF1(1)
--------->
AHL20(2)
<--------
--
AHL20(1)
<----------
DOF2
<---------
ANAC58
<---------
AHL20(2)
<--------
--
AHL20(2)
------->
TEIL
<----------
DOF2
<------
NtERF2
--------->
AHL20(2)
<---------
ANAC58
->
ARR11(3)
<---------
ARR11(3)
<---------
ANAC58
--------->
ICU4
---------->
DOF2
<---------
ANAC58
--------
ANAC58
<---------
DAG2
*
TSS
<-----------
HVH21
--------->
YAB1
<---------
AHL20(2)
<-----------
GT1
tgcttcctccccaagaacctttttgcctcttt
ctacttccgtcggccggattcagagtcataaataaatatataaaaaaaagtttcgatttttgcttttc
22411900
<------
MYB46(1)
<---------
MYB52(1)
--------->
LBD16
--------->
ANAC55(2)
<---------
ANAC58
<---------
SPL7
<---------
ANAC55(2)
<---------
ANAC58
--------->
YAB1
<---------
ANAC58
<---------
ATHB12
--------->
ZAT14
--------->
HSFC1(2)
<---------
ZAT18
--------->
LBD16
<------
MYB83
<---------
At4g35610
<---------
ANAC46
<---------
AtMYB61
--------->
At4g35610
<---
<---------
ANAC58
<-----------
RAV1(1)
<------
NtERF2
<-----
<<<<<<
TBF1
<---------
ANAC58
<---------
REM1(1)
--------->
ANAC46
--------
-
DAG2
<-------
TEIL
--------->
HSFB2a(1)
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
--
DOF2
--------->
ATHB12
<---------
ANAC58
--------->
HSFB2a(2)
<----------
DOF2
ttcttcgattcattgcgcgaatcatccgtg
atgttggtgtctagggttttatcaagagtttctcgcagcgcaggcttacgctcgtctttctcctccgtcg
22412000
--------->
ANAC46
--------->
MYB46(3)
<---------
GLK1(1)
--------->
GLK1(1)
<---------
ARR14(2)
--------->
MYB52(2)
--------->
ANAC58
<---------
MYB46(3)
--------->
ANAC55(1)
<-----------
RAV1(1)
--------->
ANAC55(2)
--------->
GLK1(2)
--------->
ANAC58
<---------
GLK1(2)
<---------
ANAC55(2)
<---------
ARR14(2)
--------->
ANAC46
--------->
ARR14(2)
<---------
LBD16
<------
--------->
LBD16
<---------
YAB1
<---------
DOF5.7(2)
--------->
At4g35610
--------------->
AGL15
<---------
MYB52(1)
<-----------
HVH21
<---------
At4g35610
------
MYB52(1)
--------->
At4g35610
<-----------
GT1
--------->
ARR14(2)
<----------
DOF2
<------
----
MYB46(3)
--------->
YAB1
--------->
ANAC58
--------->
DOF5.7(2)
--------->
MYB59
<------
->
LBD16
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
TOE1(2)
<---------
TOE2(3)
<--------
ttactccgaagaggaatcagattccgattgttgcaagccgatttcactccctcgttcacggaacccccaacaag
gttaggcttttaagctgattttactt
22412100
--------->
HSFB2a(2)
---
ANAC58
---
ANAC46
<
---
ANAC58
<---------
AHL20(2)
<---------
GLK1(2)
<--
---
GT1
<---------
HSFB2a(2)
<---------
YAB1
---------->
DOF2
<---------
YAB1
<----
gtaattcgttctggattttatcgtcgggtttatgctagggtttaaggggtttgtctaaacaaaagattgttatgttctgattctattgctctggtcttct
22412200
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ANAC55(2)
--------->
ANAC58
<---------
ANAC55(2)
<---------
WOX13(1)
<-----------
HVH21
--------->
ATHB12
<---------
At5g28300
<---------
ANAC46
<---------
YAB1
<------
<-----------
GT1
<---------
AHL20(2)
<---------
TOE2(3)
<-----------------
AGL3
<------
---------
YAB1
--------->
AHL20(2)
--------->
TOE2(3)
====================================
-------
ICU4
------->
TEIL
------->
TEIL
<---------
TOE1(3)
--------->
YAB1
<---------
GLK1(1)
------
DOF2
--------->
ANAC58
--------->
YAB1
<----------
DOF2
--------->
GLK1(2)
ttattacagtgtcacgaatttaattgtgtatgtctgaatgttaatgttttgattgctctttcatatgtcttaatttggatgtgaaattctggcaatcctt
22412300
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AGI:
At5g55190.1
Description:
RAN3; GTP binding. Identical to GTP-binding nuclear protein Ran-3 (RAN3) [Arabidopsis Thaliana] (GB:Q8H156;GB:O04148;GB:O04664;GB:O22495); similar to RAN2 (Ras-related GTP-binding nuclear protein 2), GTP binding [Arabidopsis thaliana] (TAIR:AT5G20020.1); similar to GTP-binding nuclear protein Ran/TC4 (GB:P38548); contains InterPro domain Ran GTPase; (InterPro:IPR002041); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225)
Range:
from: 22409402
to: 22411398
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g55200.1
Description:
co-chaperone grpE protein, putative. similar to AR192, adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization [Arabidopsis thaliana] (TAIR:AT4G26780.1); similar to chaperone GrpE type 2 [Nicotiana tabacum] (GB:AAC72387.1); contains InterPro domain GrpE nucleotide exchange factor, head; (InterPro:IPR009012); contains InterPro domain GrpE nucleotide exchange factor, coiled-coil; (InterPro:IPR013805); contains InterPro domain GrpE nucleotide exchange factor; (InterPro:IPR000740)
Range:
from: 22411833
to: 22413798
Orientation: Forward
Links:
TAIR
MIPS
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when using AthaMap.
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