Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ANAC58            -----                                                              --------->ATHB51                -------                                                             <---------AHL20(2)               <------                                                       ----------->GT1----------->GT1      --------->AHL20(2)                       --------->TOE1(1)        <---------YAB1--------->ATHB12             --------->YAB1                      ------>ZmHOX2a(1)      --------->AHL20(2)     <---------ANAC46     --------->AHL20(2)                 --------->HSFB2a(1)         <---------AHL20(2)     <---------ANAC58    --------->YAB1                 <---------HSFB2a(1)   <---------At4g35610   <---------YAB1       --------->ANAC58 --YAB1 --------->AHL20(2)      <---------AHL20(1)    <---------TOE1(3)           --------->ANAC58  - ---GT1 <---------AHL20(2)      <---------ARR11(3)    <---------TOE2(3)           --------->ANAC46<--   tgtctacgaataaaatggaacatcctcgttccaatatatactgctgttttattactaaggtttataattggagtgtataaaaacactccaaaataatatc  22385900                                        <----------DOF2    <---------TOE2(3)               --------->RVE1(1)   --------->YAB1               <---------AHL20(2)                                                  - ---->YAB1                      --------->AHL20(2)          <---------YAB1 --------->TOE2(2)        < -->ARR11(3)               --------->AHL20(2)     <---------ZAT2          --------->YAB1            < ---ARR11(3)            <---------ANAC55(2)  ------>ZmHOX2a(1)    <---------YAB1                    < -------->YAB1 --------->ANAC55(2) <---------ARR11(3)     ------>ZmHOX2a(1)--------->TOE1(2)<-------- -------YAB1   <---------ANAC55(2) --------->ARR11(3)     <---------At4g35610 <---------YAB1---------   atgaataatgtttttatacgtataatacataaaataaaatctctttcctcatagctggtcctctgattactatcaaacatatgattcaattgcaaatttg  22386000                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---   <---------YAB1                                                                                ---- <--------HAHB4                                                                               ------- <---------ICU4                                                                    <---------ANAC58 --------->YAB1                                                                    <---------ANAC58 --------->ATHB51                                                       <-------TEIL<----------DOF2 -------->ATHB1                                                     --------->AHL20(2)       -------- --------->AHL20(2)                                                 --------->AHL20(1)       <------- -------->ICU4                          <------ZmHOX2a(2)           <---------AHL20(2)       -------- ---------ATHB12                <---------TOE2(3)                   <---------AHL20(1)       <------- ---------YAB1                  <---------TOE1(3)                  --------->AHL20(2)       <-------- ---------ATHB51               ---------->DOF2                --------->TOE2(3) ---------->ID1<------ -ARR14(2)         --------->ATHB12  --------->MYB59         --------->YAB1   <-----------RAV1(1)<--- >ARR14(2)   --------->YAB1 --------->TOE2(3)       <---------ICU4 <---------AHL20(2)       ---------   caattattaatgcaagaagaatgagtggaacattaaagttagatcaaaaactcttcattacaaacataaataaattcattttggtgctttctaaattaat  22386100     <---------ICU4  --------->YAB1 -------AHL20(2) ------>ATHB12 ----->AHL20(1) ------AHL20(2) ----->AHL20(2) -->AHL20(2) ->AHL20(1) --AHL20(1) ->AHL20(2) --AHL20(2)                                                            ---------->DOF2 -AHL20(2)                                                   <---------TGA2(1) ---AHL20(2)                                                 <---------bZIP60(1) ------AHL20(1)      <---------STY1(2)   <------ZmHOX2a(1)   --------->bZIP60(1) >AHL20(2)          ------->TEIL<-----------------AGL1       --------->TGA2(1)       <---------WRKY18(1)   ttattgatcattttttggtatgtagctaggggttaactcatcaggaagaacattacctagatgatgtcattgtcaaagtcaataggttgacttatccgat  22386200                          <---------------AGL15                         <-----------------AGL2                  --------->ZAT14                    -                         ----------------->AG                    --------->REM1(2)                  -                         ----------------->AGL1                --------->LBD16                      <                         <-----------------AGL1               <---------ANAC55(2)                   -                    --------->DAG2                       ----------->HVH21                          -                   ---------->DOF2                     --------->YAB1                        <-------              <-----------HVH21  ----------->GT1    ---------->DOF2            <-----------GT1    <--             ----------->GT1 <---------ARR14(2)  --------->TOE2(3)            <-----------GT1--------         --------->MYB52(1)  --------->ARR14(2)  --------->TOE1(3)  --------->ZAT6    ------>ZmHOX2a(1)   ggatactaatccaacgggtcaaaaagtgccaaatcgggtcaaaatcaaaaacctcaaagatgacccgtgaacacttgtttttatcttcctcacaaaatcc  22386300                                           --------->ARR14(2)                                       <-------MYC3                                       ------->MYC3                                      <---------O2                                      ==========================================MYC_MYB                                      ----------->GT1                  -------->P                                      <---------TGA1a                  ------>MYB83         --------->YAB1               --------->TGA1a                  ------>MYB46(1)         <-----------GT1              --------->O2                    --------->MYB55(1) -------->ANAC58                      --------->ANAC55(2)            --------->MYB46(3) -------->TGA1a              --------->ANAC46                        <---------MYB111(1) ---------TGA1a      *TSS  <---------ALFIN1<---------ARR14(2)        <---------MYB111(2) -------->ANAC58     <---------ARR11(3)<-------MYC2                  <---------MYB46(2) -------->ANAC46     --------->ARR11(3)------->MYC2  <----------DOF2 <---------MYB55(2)           <-- --ARR14(2)         <---------GLK1(2) <---------ANAC55(2)    <---------ZAT18                    ----- -------ALFIN1 --------->TOE1(3)      ==========================bZIP_DOF                 ---------->DOF2 ->ARR14(2)    --------->TOE2(3)      --------->ANAC46       --------->ZAT14  <---------YAB1---------   acacgtccaaatcacaacctcaaaatctcacacatcaaacacgtgaatttgctctctttctggttcactcacctaccattactataagtctgaaagagtg  22386400                                                         --------->LBD16                                                        --------->LBD16                 --------->GLK1(2)                      <---------LBD16                            --                 <---------ARR11(3)                    <---------LBD16                      ---------        <---------ZAT2                                <---------LBD16                      <---------ANAC55(2)        --------->ZAT2                             <---------ARR14(2)                      --------->ANAC55(2)       ------>MYB83                                --------->ARR14(2)           <---------LBD16   ---       ------>MYB46(1)   ------>ZmHOX2a(1)    ------>NtERF2                     <---------At5g28300-- -------WOX13(1) --------->ARR11(3)           --------->LBD16     <------MYB46(1)         <---------LBD16 ---->ATHB12     <-----------ARR10           <---------DEAR3(1)   <------MYB83 <---------ICU4    ---- >DAG2<---------ALFIN1   <----------DOF2    <---------LBD16     <---------WOX13(1)       <-----------GT1   attgaaacccacctcgaaaaatctatccttttttttgttttccttctccggcgaatccccggggagattggtaatcggtaatcacggctatttacgggat  22386500                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                       <---------RAP2.6(3)                                                                                       <---------SPL7                                                                                       ------>NtERF2                                                                               <---------GLK1(1)<----                                                                               <---------At4g35610---                                                                           --------->ALFIN1     -----                                                                          ------->PIF5--------->ATERF1(2)                                                                         <---------ANAC58       <----                                                                         <---------bZIP60(2)    <----    --------->ANAC58                     <---------AHL20(2)              <---------ANAC46       <----    --------->ANAC58                 ----------->GT1                   <------ZmHOX2a(1)       ------    --------->bZIP60(2)       ---------->DOF2                     --------->ANAC46    <---------ANAC58 ------->ANAC58              ------->GAMYB   --------->YAB1      <---------LBD16      <---------ANAC46 >LBD16  <----------DOF2    --------->ANAC58 <---------ICU4     --------->MYB52(1)    <---------ATERF1(2) ------>DAG2                --------->ANAC58<---------ATHB12   ----------->HVH21    ------>NtERF2---- ------->ANAC58 <----------DOF2      <---------MYB46(3)  ------>ZmHOX2a(1)<-------PIF5<---------ANAC58 ------>DOF2  <---------At4g35610   <--------P           <----------DOF2 <---------ANAC58 -----------   aaagccacggcctttgagctttcatgtccaacgaaagggttgtttaatcataactaatcctttgcctcacggaggacgtggagctctgccgtctgaaggc  22386600                                      <---------HSFB2a(2)                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AGL2                                     ----------------->AGL3                                   <---------ARR14(2)                                   <---------TCP20                                   --------->ARR14(2)                                  <-------GAMYB            =================HOX2a_HOX2a            ------>ZmHOX2a(2)    <---------MYB46(3)           ==================HOX2a_HOX2a           <---------GLK1(1)     <---------DEAR3(2)           <------ZmHOX2a(2)    <---------DEAR3(1) -------At4g35610              <------NtERF2 ----NtERF2--------->GLK1(1)   --------->ATERF1(1) ------>At4g35610             ------------>AtMYB77 ------RAP2.3(1)             <---------DEAR3(1) -----DEAR3(1)             --------->LBD16 -----ATERF1(2)            <---------ATERF1(1) ------>ATERF1(1)          <---------SPL7 ---->ATERF1(2)           --------->DEAR3(1)                   <----------DOF2 -----RAP2.3(2)          <---------LBD16               --------->TOE2(3)   <------MYB46(1) -----RAP2.3(3)        --------->ANAC46                --------->TOE1(3)   <------MYB83 -----RAP2.6(2)       ------>ZmHOX2a(1)--------->LBD16--------->ZAT6      --------->MYB59 --->RAP2.6(3)  ------>ZmHOX2a(1)<---------ATERF1(1) -------->P<---------DAG2 -->NtERF2<---------ARR14(2)--------->ATERF1(1)    --------->AtMYB61      <---------TOE2(3) >HVH21   --------->ARR14(2)<------NtERF2         <---------MYB52(2) <---------YAB1             -----   ggcagtccctccgatctcctcttcctcgccggaggcggttccacaaatagccactaaccctaaccctttttctaattaggtttttagttcttagagtcct  22386700                        <---------AHL20(2)                        <---------AHL20(1)                       --------->YAB1                      <---------YAB1                           ----------->RAV1(1)                     <---------AHL20(2)              ---------->DOF2                     --------->AHL20(2)           <------ZmHOX2a(2)                  ---------->DOF2                    --------->YAB1               <---------ARR11(3)               --------->YAB1 <---        <---------MYB52(1)                       --------->ARR11(3)              <---------YAB1  ---- ->ZmHOX2a(1)  --------->HSFB2a(2)    <-----------RAV1(1) --------->GLK1(1)    --------->YAB1    <---   gtattaatctgttatttcgagattataatatttgtgagcaatgttgttgaagatcaaaagagttccaacagttgtatcgaattatcaaaaagatgagaca  22386800  Previous    Next  AGI:  At5g55120.1    Description:  VTC5; galactose-1-phosphate guanylyltransferase (GDP). similar to VTC2 (VITAMIN C DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT4G26850.1); similar to VTC2-like protein [Actinidia chinensis] (GB:ABP65665.1); contains domain PTHR20884 (PTHR20884); contains domain PTHR20884:SF3 (PTHR20884:SF3) Range:  from: 22386321    to: 22389093    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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