Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------HSFC1(1)                           --------->HSFC1(1)                    --------->YAB1                    <---------ICU4                   <---------ATHB12                   --------->ICU4                   <---------YAB1                                                          --------->GLK1(1)              --------->YAB1  <<<<<<<ZML2                                             ------->GAMYB              --------->ANAC55(2)                                                  --------->MYB52(1)    ------>ZmHOX2a(2)      --------->HSFB2a(2)       --------->STY1(2)   --------------->AGL15   ---- ----TOE2(3) ---------->ID1<---------HSFB2a(2)   --------->YAB1          <---------------AGL15  <----   tttcgatctgaatttttcgtaatcattctctagaacagttttatgtctctaacatagctagttcgagtctctctaccatatagattaacggagatttcta  22381600                <---------ANAC58                <---------ANAC58------->GAMYB                                     <---------ZAT2            ------>ZmHOX2a(1)  --------->MYB46(3)                                 --------->ZAT2          <---------ICU4   <---------YAB1      <---------ARR14(2)                 <---------GLK1(1)--         <---------YAB1  <---------ICU4        --------->GLK1(2)                  <---------At4g35610   <-------TEIL <---------ANAC46----------->HVH21                  <---------DOF5.7(2)        ------- --------->GLK1(1)       --------->YAB1       <---------ARR14(2)   --------->MYB52(1)         ------- ----->ANAC46 <---------At5g28300--------->MYB52(1)    --------->At5g28300     ------>ZmHOX2a(2)   <- -----LBD16--------->TOE2(3)  --------->At4g35610     ----------->GT1 ------->GAMYB           -------   cggagttcatcatccttaccgtgttcatcatcatccgacggagatggagattccgacggtaaatctagataacgctcgtgatcgagctccgattccaagt  22381700                                <---------O2                                <---------ANAC58                                <---------ANAC55(2)                                <---------ANAC55(1)                                <---------ANAC58                                <---------ANAC46                         <-------GAMYB                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                      <------NtERF2                     ------>NtERF2                    <---------DEAR3(1)                 <---------ETT(2)                                                 ---------->DOF2 ------->At4g35610 --------->ATERF1(1)    <------ZmHOX2a(1)----------->HVH21      --------->YAB1   <- -->ANAC58       ----------->HVH21      --------->ALFIN1 --------->At4g35610     <---------ATHB12  <- -->ANAC46       --------->ETT(2) --------->ALFIN1     <------ZmHOX2a(1)    <--------ZAP1 <---------MYB46(3) --------At4g35610<---------ATERF1(1)  <------ZmHOX2a(1) <---------At4g35610--------->At5g28300    <- -->ANAC58      --------->SPL7 <-------TEIL  <------ZmHOX2a(1)   ------->TEIL--------->WRKY18(1)  ---   cagcatcgtttgaattcggacgacggcgtttgatacgtggaggaggaggagaagagaggagatgacgaacatcgtagcggtcaataaagaggctgttcca  22381800              <------NtERF2            <---------DEAR3(1)           <------NtERF2           --------->ATERF1(1)          ------>NtERF2          <-----------HVH21          <---------SPL7         <---------O2         <---------DEAR3(1)         <---------ANAC46         --------->O2         --------->RAP2.3(2)         --------->DEAR3(1)         --------->RAP2.3(3)        <------NtERF2        --------->RRTF1(1)        --------->ATERF1(1)        --------->DEAR4(2)        --------->RAP2.3(1)        --------->ORA47(2)                                                         <-------TEIL        --------->ERF1                                                            >>>>>>>>>>>>>>>>>LFY       <---------ATERF1(1)                                             --------->MYB46(3)       <---------ZAT18                                                ------>MYB46(1)    <---------ANAC58       --------->ZAT18                                                ------>MYB83<------ZmHOX2a(2)   ------->GAMYB                                                    --------->AtMYB61    <---------ANAC46  --------->MYB46(3)                                          --------->REM1(2)  --------->AGP1 --------WRKY38(1)                                           ----------->HVH21   <---------ARR11(3) --------WRKY12                                    ---------->DOF2 --------->MYB46(3)    <---------ANAC58 --------WRKY45                          --------->YAB1    <---------ANAC58      --------->ARR14(2) ------>WRKY18(1)                       <---------ATHB12   <---------ANAC58      <---------ARR14(2)   gtcaacgagcgccgtcggagagttgacaaacgttgccatcgaatcatcgtcgaaaaagagagcgtgacgaccaacaatctctagatccattgtgtgattc  22381900                                                                                      <---------WRKY18(1)                                                                 --------->LBD16    <---------WOX13(1)                                                               <---------LBD16    --------->ATHB12                                                             --------->ARR14(2)  <---------YAB1                                                     <---------MYB52(1)        <---------ANAC58                                                    --------->LBD16           <-------TEIL                                                   --------->ANAC46 <---------HSFB2a(1)                                                   ----------->GT1 --------->ARR14(2)*TSS                                                   --------->ANAC55(2)      <---------ARR14(2)   --------->ANAC58     <---------LBD16            <---------ANAC55(2)      --------->ARR14(2)   --------->ANAC58 <---------ARR14(2)             --------->TOE2(3)--------->HSFB2a(1)    ---------- ---------->DOF2    --------->ARR14(2)    <---------ANAC46   <---------ARR14(2)<---------ANAC58   ttctaaagcaatggagaattgggatttggggaagaggctagggtctgtgtaatccgtaatttggaaccggatgttccaaattcgtgattgacccaaagat  22382000                                     <---------ANAC46                                  <---------TGA2(1)                                  --------->TGA2(1)                                  <---------O2                                  <---------bZIP60(2)                                  --------->bZIP60(1)                                  <---------bZIP60(1)                 ----------->GT1                                  --------->O2                 <---------MYB52(1)    --------->ANAC55(1)                                 ----------->STF1            <---------ANAC58        --------->ANAC55(2)                                <---------TGA2(2)            <---------ANAC46        --------->ANAC46                               ----------->TGA1              <---------ANAC58        --------->ANAC58                       --------->ZAT18                  <---------ANAC58         --------->AtMYB61                 <------ZmHOX2a(2)>>>>>>>>>>HY5         <---------ANAC58      <-----------GT1                --------->ARR11(3)<---------ANAC46    <-----------GT1--------->DAG2  --------->ANAC58 >DOF2    ---------->DOF2      ----------->HVH21 <----------DOF2    ---------->DOF2<---------ALFIN1   gtgatgacttacaaaagagatcaagtcgactaaatgacgtcgtttataagacttttttacttgccgtttgaaaagtaataaaaccacacgcatttgggag  22382100                 <-------TEIL               <-------PIF5               ------->PIF5                                                                        --              <---------ANAC58                                                  --------->TOE2(3)  --              <---------ANAC46     <---------ANAC58                             --------->TOE1(3)  --              <---------ANAC58     <---------ANAC58                       --------->ANAC46  <--------              <---------bZIP60(2)  <---------ANAC46                   ---------->ID1  --------->TOE2(3)            ------->GAMYB         ---------->ID1                     <-----------GT1  <----------DOF2      --------->MYB52(1)         <-----------GT1                 <---------AHL20(2)   --------->TOE1(3)    <---------MYB52(2) <----------DOF2    <-----------GT1----------->GT1 --------->LBD16 --------->YAB1   aaaataactaacaacgacgtgcattctttatgtttttgcgttttcaaccctgcttaagaaagtttatattttttccccataaccttaactttaataaatg  22382200    --------->ANAC58    --------->ANAC58                                                                       --------->At4g35610   ------>NtERF2                                                                          --------->ARR14(2)  --------->DEAR3(1)                                                                      <---------ARR14(2)  --------->RAP2.6(2)                                                           ===================== ------->ANAC58       ----------->GT1                                           --------------->AGL15 ------->ANAC46   --------->DAG2                 --------->REM1(1)              <---------------AGL15 ------->ANAC58  ---------->DOF2        ---------->DOF2                  --------->GLK1(2)<---------- -AHL20(2) ----------->GT1             <---------AHL20(2)       --------->ATHB12=====================   taagccaccctaagagtgaaaaagcagtgaaatctccaaatttaaagtgcttcaacatttgtgatttcattggagaattttgctcaatctagtatctgcc  22382300                                                                          --------->MYB59                                                                    <----------DOF2                                                                    <---------------AGL15                                                                    --------------->AGL15                                                      --------->At4g35610 <---------TOE1(3)                                                <---------YAB1     ----------------->AGL3               --------->GLK1(1)             --------->ARR11(3)    <-----------------AG------->TEIL              <---------MYB52(1)             <---------ARR11(3)    <-----------------AGL1             <-------GAMYB                   --------->ICU4 <----------DOF2--------->ANAC55(2)            <---------MYB46(3)               <---------AHL20(1)    <-----------------AGL3           <---------ANAC46                  --------->AHL20(1) <----------DOF2       <-----------GT1         ------------>AtMYB77      <----------DOF2    <---------At4g35610 <---------TOE2(3) ====================================================================================MADS_MADS      < -ARR10 ----------->HVH21       <-----------GT1--------->AHL20(1)  <-----------------AGL2    <------- ====================================================================================MADS_MADS   <---   tcgtcttgatgtgacggttatccacattgagtttttactttgatgaaaatattatgagctctctttctttcttttttaggtaacttatgaaccctctttc  22382400             --------->ANAC58                  <---------AHL20(2)            <---------AHL20(2)             --------->ANAC58                 --------->AHL20(2)            --------->AHL20(2)   >>>>>>>GRF7                     ----------->GT1                          <---------AHL20(2) -----------HVH21         <---------YAB1<---------ANAC55(2)       <---------YAB1 ---DOF2<----------DOF2------>ZmHOX2a(1)--------->ANAC55(2)    --------->AHL20(2)          <--------- -------DOF2 --------->ANAC46      <---------MYB46(3)          <---------AHL20(2)  ------->TEIL <----   tttgtcagggctttcaagctatctcctcatgatacaatggttaagtgatttaatattctctctatataatttttgtaattttatgcatctatctaaccat  22382500  Previous    Next  AGI:  At5g55100.1    Description:  SWAP (Suppressor-of-White-APricot)/surp domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO38920.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) Range:  from: 22378328    to: 22381985    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version