Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->YAB1    --------->YAB1                            <---------GLK1(1)          <---------MYB52(1)  <---------KAN4(2)                  --------->ANAC46                 <-----------------AGL1 ------->LBD16                      <---------LBD16                   ----------------->AGL1 --------->GT1                     --------->MYB52(1)                 <-----------------AG ------LBD16                 --------->AHL20(2)                     <---------ARR14(2) --->ARR14(2)             <-------MYC3  <---------ARR14(2)          --------->ARR14(2) ----ARR14(2)             ------->MYC3--------->LBD16              <---------MYB52(1) ---GLK1(1)            <---------ALFIN1 --------->ARR14(2)     ------->TEIL--------->ARR14(2) >MYB46(3)           ------->TEIL --------->MYB52(1)  ----------->GT1--------->MYB52(1)            --   ccggtataatcagaaaccacatgaaccacgtttaaataaccggaatcgatatcagaaggtaaatgaaccggtaccggtatcggtattggagtcactactt  22072300                                                                                                  <--                                                                                                 <---    ==========================HOX2a_HOX2a                                                       <----    ------>ZmHOX2a(2)                                                                        <-------TEIL   <---------GLK1(1)                                                                        ---------   ===========================HOX2a_HOX2a                                                   ---------   <------ZmHOX2a(2)                                                                       --------->ARR11(3)  <---------ARR11(3)                                                                       <---------ARR14(2)  --------->ARR11(3)                                                                       --------->ARR11(1)  --------->ARR14(3)                                               --------->YAB1          --------->ARR14(2)  <---------ARR14(3)   <------ZmHOX2a(1)                          <---------YAB1         ----------->ARR10 ------->LBD16   <---------LBD16<---------YAB1        --------->ICU4                   ---------->DOF2   ccgagatctcagagtcatcgacggaggacgatttatgagtgagtttagaagtagcgatgatgcagacgatgatagagttgatgactaagtaaagatacgg  22072400                                                                                        --------->LBD16                                                                                       --------->DEAR3(1)                                                  --------->ANAC58                  --------->DEAR3(1) -------MYB46(3)        --------->TOE2(3)         --------->ANAC46               --------->YAB1 ------AtMYB61         ----------->GT1--------->ANAC58        --------->ANAC58   <---------ICU4 -----MYB52(1)         --------->YAB1 --------->ANAC58        --------->ANAC58 --------->GLK1(2) >ARR14(1)    <---------DEAR3(1)    ---------->DOF2         --------->MYB52(1) <-----------ARR10 >CCA1(2)<------ZmHOX2a(1)   <---------AHL20(2)   --------->ANAC58  ----------->HVH21  <---------O2   tggttttaagaggaagacggtgttatcgtaaataatcggaaagcaagagactacgaaatgggaaacggaagggaccgtgagaatcatcgccgtggcaata  22072500                   <---------DEAR3(1)         <------NtERF2        --------->LBD16 <------NtERF2        ------>NtERF2  ------>NtERF2        <---------ATERF1(1)       --------->ATERF1(2)       --------->DEAR3(1)   <------NtERF2       <---------ATERF1(2)  <---------MYB52(1)       <---------DEAR3(1)  <---------RAP2.6(3)      <---------LBD16 --------->ALFIN1          <------MYB83      --------->ATERF1(1)--------->ATERF1(1)    <------MYB46(1)                                     <    --------->ANAC58<---------MYB46(3)        <--------P                            ----------->GT1<-    --------->ANAC58<---------DEAR3(2)        --------->ALFIN1    --------->YAB1<---------WOX13(1) <-   gatgaaacgccggcgattacgacggtggccgtcgttttgaaggaagaggtagggagaagaagaggcattgagaattgaattgaatgatgtaatttgtttt  22072600                              --------->MYB55(2)                                           --------->At5g28300                              --------->ABI4(2)                                           -----------                              <---------MYB46(3)                                        <-------TEIL                             --------->ALFIN1                                         <---------ARR14(2)                            <---------MYB52(1)                                        --------->ARR14(2)                           <---------ANAC46                                           --------->ARR11(1)                           <------MYB83                                        <---------AHL20(2)                           <------MYB46(1)                    <----------DOF2<-----------TBP                          <---------DEAR3(1)          ---------->DOF2  <---------ANAC46--------->CCA1(2) ----------DOF2           --------->MYB46(2)     --------->AHL20(2)    --------->ALFIN1--------->ARR14(1) --------ANAC58       --------->MYB52(2)  --------->ANAC46  <---------HSFC1(2) <-----------TBP    --- --------ANAC58     <---------MYB52(1) --------->TOE2(2)*TSS--------->HSFC1(2) --------->AHL20(2) <--   tgctttgggaatttcaaattttgttagttcggtggttcttatctacgaaaataaactaaagaagctttgagatgtgtggatttatatagatacggtgaaa  22072700                                     <----------DOF2                                 <---------ZAT18                              <-----------RAV1(1)                              <---------ANAC58                              <---------ANAC46                       --------->LBD16                      --------->ANAC55(2)                              <---------ANAC46                      <---------ANAC58                            --------->ATHB12                      <---------ANAC55(1)                   <----------DOF2                      <---------ANAC46                 --------->ALFIN1<---------TOE2(3)           -- >GT1  --------->TOE2(3)      <---------ANAC58     <---------YAB1 <---------AHL20(2)              <-- ------>AHL20(2)      <---------ANAC58   <-----------GT1  <---------PCF2                 <---------ANAC58 -------AHL20(2) --------->ALFIN1--------->ZAT18 --------->YAB1  <---------AHL20(2)      <---------ANAC58   tttataaattcttaaaaatgtggtccgtgtttgtgtgggctttttacagaatcataagtgggccttatttattgagggtatggttatggaggcttatctg  22072800       <-----------HVH21      ----------->HVH21     ------->MYC2     <-------MYC2     <-------MYC3     ------->MYC3     <-------MYC4     -------->ABF1     ------->MYC4    <---------O2    --------->O2                                                                         ------------    --------->ANAC55(2)                                                                  ------------    <---------ANAC55(2)                                                                  <-----------    <--------ABF1                                     <---------ANAC58      <---------ARR14(3)    --------->TGA1a                                   <---------ANAC58      <---------GLK1(2)     <--    <---------TGA1a     <---------TOE2(3)     --------->AHL20(2)            --------->ARR14(3)    <-- --------->HVH21        ---------->ID1        --------->YAB1                --------->ARR11(3)    --- -------WOX13(1)       <-----------GT1       <---------YAB1<---------MYB59  <---------ARR11(3)    ---   agtgacacgtgtcagttttgggttttgacgttttaagttataaacttataatataagcttgcctaacatttgcaacaagattttgacaatagaagtacaa  22072900                                                    --------->ANAC46                                                    --------->ANAC55(2)                                                 <---------MYB111(2)                                                 --------->AtMYB61                                                 --------->TOE2(2)                                         --------->At4g35610                                        --------->ARR14(2)                                        --------->GLK1(2) <---------AHL20(2)                     <---------ARR14(2) --->AtSPL3<---------ANAC58            <---------GLK1(2)             <---------MYB52(1) --->AtSPL8<---------ANAC58         --------->HSFB2a(2)          --------->SPL7 ----AtSPL8<---------ANAC46         <---------HSFB2a(2)------->TEIL <-------GAMYB                  <- -------AHL20(1)                  <-------TEIL ------>NtERF2  <---------ANAC58                     -- -------ARR11(3)                 --------->GLK1(2) ------>MYB46(1) <---------ANAC46          -------- ------>AHL20(2)         --------->GLK1(2)    <---------ALFIN1<---------ANAC58         <---------O2<- ------>AHL20(1)--------->ATHB12 --------->CCA1(2) ------>MYB83<---------SPL7        <-----------GT1   tattttatgcattgtgtgtgattagagaatttgagattcgagaatctgccacctacgtaccaagtcgtaccgttgatttttgttttttcacttggcaaca  22073000                                      <---------LBD16      --------->TOE2(3)                                 <---------AHL20(2)       --------->ATHB12                             <---------AHL20(2)   <---------ANAC58                             --------->AHL20(2)   <---------ANAC58 --------AHL20(1)           <---------AHL20(2)--------->HSFB2a(1)                  <---------ZAT6 ------->AHL20(2)       <---------AHL20(2)    --------->HSFC1(2)                   ----------->GT1 --->RAV1(1)            --------->AHL20(2)    <---------HSFC1(2)            ------->TEIL --------AHL20(2)       <---------AHL20(1)    <---------HSFB2a(1)     <---------AHL20(2)           <-   aaaaatttagtcgattgtgtcttcattttatttatttttttggggagaaatttcgagtcttcattagttcattttatgtatgttagtgttaatttgagtt  22073100             <---------CCA1(1)             <---------RVE1(1)            <---------ARR14(2)                                                  <---------TOE1(3)            --------->ARR11(3)                                            --------->DAG2--------->ANAC58            <---------ARR11(3)                                           ---------->DOF2--------->ANAC58      <---------HSFC1(1)                                           ----------->GT1    <---------ANAC58      --------->HSFB2a(2)                                      <---------AHL20(2)     <---------ANAC58      <---------HSFB2a(2)                                      --------->AHL20(2)  <--------P    <------ZmHOX2a(2)                                      <---------AHL20(2)   <---------TOE2(3)   <---------ARR14(2)             <----------DOF2          --------->AHL20(2)   <---------AtMYB61   --------->ARR14(2)       <---------KAN4(2)      ----------->GT1 --------->YAB1<---------MYB46(3) --------At4g35610      ----------->GT1        <---------YAB1  <---------YAB1   <---------YAB1   <---   tagccgatctagaagatatttgtaaatggaaatattcttttttggttttgttattgtaaaattatataattgtaaaaaagttatggttgctagcaaaaaa  22073200  Previous    Next  AGI:  At5g54300.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39207.1); contains InterPro domain Protein of unknown function DUF761, plant (InterPro:IPR008480) Range:  from: 22071195    to: 22072656    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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