Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-----------HVH21                                             --------->ALFIN1                        ----------->HVH21    <-----------RAV1(1)                        <---------ETT(2)    <-------MYC2                        --------->DEAR3(1)  ------->MYC2                      <-----------HVH21     <-------MYC4                     ================================MYC_MYB                     --------->DEAR3(1)     ------->MYC4                     ------->GAMYB          ------->MYC3                    =================================MYC_MYB                    --------->DEAR3(2)      -------->ABF1                    <------------AtMYB77    <-------MYC3                    --------->MYB46(3)     --------->O2                   ==================================MYC_MYB     --------->At5g28300<---------DEAR3(1) --------->TGA1a   <---------ANAC46------>MYB46(1)         <---------TGA1a  <-----------------------TaNAC69(2)       ========================================bZIP_DOF ---------->HVH21  ------>MYB83            <---------O2 --------->ATHB12      <------MYB83 ---------->TGA1   -------->P              <---------ANAC55(2)              --------->ALFIN1       <- -->ANAC58        --------->MYB52(1)       --------->ANAC55(2)    ----------->GT1<---------WRKY12  <- -->ANAC58    --------->ANAC46             --------->ANAC46  <---------ANAC46 <------MYB46(1)      <- -->DAG2      --------->ANAC58          <-------TEIL   ----------->HVH21 --------->DAG2         <---- ->SPL7       --------->ANAC58 <------ZmHOX2a(1) <---------At4g35610    ---------->DOF2        <-----   cagtgacggtaagagcaagccaaccgtcgacgaggagacacatacacgtgtcgctcactgatagggtatagagaaaaagtgggtctacgaatagacccgt  22046900                                                       --------->ANAC55(2)                                               <---------LBD16                                <------                                              ------>ZmHOX2a(2)    ------>MYB46(1)           --------                                             <---------GLK1(1)     ----------->RAV1(1)     <---------ANAC55(2)                                            <---------AGP1         ------>MYB83            <---------ANAC58                                            --------->ARR11(3)   <---------MYB59           --------->ANAC55(2)                                            <---------ARR14(2)   --------->MYB46(3)        <---------ANAC58 --------ANAC58               <---------HSFB2a(2)      <---------ANAC55(2)               <-----------GT1 --------ANAC46               --------->HSFB2a(2)   --------->WRKY18(1)           ---------->ID1 --------ANAC58               <---------HSFC1(1)   <-----------HVH21          <---------MYB52(1) -----MYB52(1)        ---------->ID1        --------->ARR14(2)   <---------MYB55(2)  <---------YAB1 < ------HVH21  <xxxxxxxxxxxxxxxxsmallRNA(i) <---------CCA1(2)    --------->ANAC46<---------MYB46(3)  <   tgcgcatacaaggagaaagactttgttccattctcgaacccatttggatctcgggtcaagtattcgacccaacatcatccatttgttgttattacttgac  22047000                  <-------MYC2                  ------->MYC3                  ------->MYC2                  <-------PIF5                  ------->PIF5                  <-------MYC4                  <-------MYC3                  <-------PIF4                  ------->PIF4                 --------->ANAC58                 --------->ANAC58                 <---------ANAC55(2)                 <---------TGA1a                 --------->ANAC55(2)                 <---------O2                 --------->O2               <------------OsbHLH66               <---------ALFIN1            <---------LBD16--------->ARR14(2)     <<<<<<<<<TBF1<-----------HVH21 --------->ARR14(2)        <---------ARR14(2) <---------ARR14(2)   --------->ZAT18     <<<<<<<<<TBF1 ---WRKY18(1) --------->LBD16            <------------------------ANAC81 --->HVH21 ------>ZmHOX2a(1)  <---------ANAC58              ------>ZmHOX2a(1)             <<<<<<<<<TBF1 ---------MYB52(1)------->MYC4<---------ANAC58           ------>ZmHOX2a(1)             <<<<<<<<<TBF1 ---------CCA1(2)--------->TGA1a--------->ALFIN1------>ZmHOX2a(1)              <---------CCA1(2)<----   ccgtttcttcttcctccgcacgtgagccctatacgtgggtcttcttcttcctcttcttcctcctcttcttcgatttcttccatctcttcttcttcttcat  22047100                                                             --------->ALFIN1                                                   <-------MYC3                                                   ------->MYC3                                                  <---------bZIP60(1)                                                  <---------TGA1a                                                  --------->TGA1a    <-------MYC2                                                  <---------ANAC58   ------->MYC3                                                  <---------ANAC58  <---------ANAC46                                                  <---------O2      <---------ANAC58                                                  --------->ANAC55(2)<-------MYC3                                                  <---------ANAC55(2)------->MYC2                                                  --------->O2      <---------ANAC58        --------->LBD16                           <---------ANAC46<---------ANAC58       <---------ANAC58                          <-----------------------TaNAC69(2)       <---------ANAC46                         ------------->DYT1<---------ANAC46       <---------ANAC58                       <-----------HVH21   <---------ANAC58     ------>ZmHOX2a(1)                   <---------ANAC46  <---------ANAC46                     -----  ------>ZmHOX2a(1)                      <---------ANAC58  <---------ANAC58          <---------ANAC46 -----At4g35610     <---------At4g35610  <---------ANAC58  <---------ANAC58          <-----------RAV1(1)   cttcctcctccgtgttatcttcttctgagtaatatccaacgctgcttgagtcacgtgagaagcgtgatgcgcgtgtgaattcttgttctgtggccattga  22047200                                                                                      *TSS                                                                                      <---------ICU4               <---------ALFIN1                                          <---------TOE2(3)        <--          --------->ANAC58                                               ------->TEIL --------->YAB1          --------->ANAC46                                  --------->ARR11(3)        -------->HAHB4          --------->ANAC58                                  <---------ARR11(3)       --------->ICU4      --------->ANAC58                                     <---------GLK1(1)         <---------ATHB51      --------->ANAC58                       <---------ETT(2)       <---------At4g35610      >>>>>>>>    --------->MYB52(1)      ----------->GT1  --------->ETT(2)       --------->At4g35610 <---------YAB1 ----->DOF2  ----------->RAV1(1)         <---------AtMYB61 --------->GLK1(1)      --------->ICU4  ---   aagtactaacgcatgcaacacagagagagatagttattttgtgaaggtcgacaatggagagaaatcttggagatgaacgttgtcttaattatgaagaaga  22047300             ---------->DOF2   --------->HSFB2a(2)   <---------HSFB2a(2)                                                                            <--   --------------->AGL15                                <---------ANAC58                      <------ZmHOX2a(1)   <---------------AGL15                        <-----------GT1                        <---------AHL20(2) -------HSFB2a(1)                            <---------YAB1                            --------->AHL20(2) >TBF1   ----------->GT1    <---------ZAT6<---------YAB1<---------ANAC58    --------->YAB1--------->ICU4 ------>HSFB2a(1)   ----------->HVH21   <-----------GT1 <---------ANAC46 --------->YAB1<---------YAB1   attttctaaaaatgtaaaagaaatgacatagtgctattcaaattaccattatacccttgcgagtttttgttatactaataagaaactatataattaggag  22047400                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            <--------                       <-----------GT1                                                      <--------                    <---------YAB1                             --------->YAB1               ---------                  -------->ATHB1                              <---------ATHB51             ------->TEIL                  --------->ATHB51                   ------->GAMYB                     --------------                  <--------HAHB4                    --------->DEAR3(1)                 <-------------                  <---------ICU4                    --------->MYB46(3)               <-------TEIL                  --------->YAB1        --------->ATHB12      --------->ICU4 ----------->GT1---------                 <---------YAB1       <---------WOX13(1) --------->ANAC58    --------->ANAC55(2)            >>>>>>>>>TBF1<---------YAB1<---------AHL20(2)--------->ANAC58    <---------ANAC55(2) -------ZAT14    --------->ICU4---------->DOF2      <---------MYB52(2)       --------->ANAC55(1)<----   tttagtatgttgaagaagaattattatacgattgaaagtaattgattagtagcaacgaccagcaattataagcacaaacatgtaacattcatgtaccaaa  22047500  ---------->DOF2 >MYB83 >MYB46(1) --MYB59 --MYB46(2) ->MYB46(3) ------->AGL15 --------AGL15 --MYB111(1) ---------AG <------ZmHOX2a(2) ---------AGL1            <---------YAB1 ---------AGL3 --------->KAN4(2) -------->AGL1--------->KAN4(1) ->AtSPL8   --------->ARR11(3)                <----------ID1                       --------->GLK1(1) --AtSPL8  <------ZmHOX2a(1)                ---------->DOF2                        <---------GLK1(1) -------->AGL2<---------KAN4(1)          ----------->GT1    <---------REM1(1)    <------ZmHOX2a(1)<-- -----ATHB12<---------ARR11(3)    ---------->DOF2 ---------->DOF2              --------->MYB59-------   catggaaagtgaaggatcattctaagttatgaatacaaaagaaatgtaaagacaaagaacagttgtagtctttctatatgttaggaaatgcctaaaacac  22047600 <----------DOF2 --------->TOE2(3)        ---------->DOF2                                         --------->ZAT6 -------ARR11(3)     ----------->GT1 ------>MYB83          ---------->DOF2    --------->AHL20(2) -->ZAT6            ----------->GT1  ------>MYB46(1)   --------->ZAT6     <---------AHL20(2)   tatctttaatatagagtttgcaagggaaaaaagaacacctagctaaaaacaaaatgaacactaatgccagtagtatttgattaaacactaaaaacaactt  22047700                                               --------->ICU4                                               <---------ATHB12                                         --------->HSFB2a(2)                                         <---------HSFB2a(2)                                   --------->ATHB12                                   <--------HAHB4          ---------->DOF2                                   --------->YAB1     ----------->GT1                                   <---------ICU4   ---------->DOF2                                  --------->ICU4  <---------YAB1                             --------->HSFB2a(2)<---------ICU4                 ------>ZmHOX2a(1)<---------YAB1--------->YAB1                 <----------DOF2--------->YAB1 <---------ATHB51                      <---------GLK1(1)   cttgaaatacaaatgagtccttttgtttcttctataatcatttctacaaataatgaaagttaaaagtcagtgtttagtttttttttggtatcccagtcaa  22047800  Previous    Next  AGI:  At5g54250.1    Description:  ATCNGC4 (DEFENSE, NO DEATH 2); calmodulin binding / cation channel/ cyclic nucleotide binding. Identical to Cyclic nucleotide-gated ion channel 4 (CNGC4) [Arabidopsis Thaliana] (GB:Q94AS9;GB:Q9XFS2); similar to DND1 (DEFENSE NO DEATH 1), calcium channel/ calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G15410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39198.1); similar to hypothetical protein OsI_003912 [Oryza sativa (indica cultivar-group)] (GB:EAY76065.1); similar to cyclic nucleotide-gated ion channel 4 [Hordeum vulgare subsp. vulgare] ( Range:  from: 22042779    to: 22047286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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