Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------->TEIL                                        --------->GLK1(2)                                        <---------ARR11(1)           <---------ZAT2               <---------ARR14(2) ------>bZIP60(1)                       --------->ARR14(2)             <---------ARR11(3) -------bZIP60(1)                      <---------ARR14(1)          --------->ANAC58 ------->STF1                       <---------TOE2(3)        <------ZmHOX2a(1)                    --- ----->HVH21                       <---------DOF5.7(2)   <---------ANAC46             <-----------TGA1 ----->TGA1--------->ZAT2    ------>ZmHOX2a(2)         ------>NtERF2   --------->ARR11(3)         --- -----HVH21<---------At4g35610   --------->DOF5.7(2)   --------->LBD16<---------GLK1(1)   <---------ANAC55(2) --At4g35610               --------->ARR11(3)         <---------DEAR3(1)              <-----------HVH21 ->At4g35610              --------->ZAT14            <---------LBD16  --------->GLK1(1)   --------->ANAC55(2) ->LBD16<---------At5g28300<---------ARR11(3)  <-----------GT1     --------->ANAC58  --------->ANAC46   acgacgttgttacagctaggctcaacagtgatctcgttaacgaatcttttgactctccggcgaggaaacaagaaatcttcttcgtcttcgtcacttgatg  21636100              <------ZmHOX2a(2)         <-----------RAV1(2)       <-----------HVH21       <-----------TGA1      <---------ANAC58                                   ---------->DOF2      <---------bZIP60(1)                              --------->LBD16      <---------ANAC58                               <---------LBD16      <---------ANAC46                        <---------ANAC58                   <---------ANAC46   <---------MYB52(1)              <----------DOF2--------->MYB46(3)           <---------ANAC46 ====================RAV          --------->TOE2(3) --------->MYB52(1)    <---------DAG2 <-----------RAV1(1)              <---------DAG2 -------->P               <----------DOF2 ------>GLK1(2)                 -------->P <---------ATHB12         --------->At4g35610 ---->TEIL  <------ZmHOX2a(1)  <-----------GT1<---------ANAC58      <---------At4g35610    --------->ATHB12   aatctgttgcgtcaggatcagtataacaaatactaacctttttcaatgacttaccaccggaaagtttttccgatgactttttggtgtatttagtcattga  21636200                                    <---------AHL20(1)              ------->TEIL          <---------AHL20(2)            --------->ZAT14         --------->ARR11(3)            <---------ZAT14         <---------ARR11(3)            <---------ZAT18         --------->AHL20(2)          --------------->AtSPL8    --------->AHL20(1)         <---------ANAC46      <---------ATHB12     <---------ZAT14         <---------GLK1(1)     --------->ZAT18         --------->GLK1(1)                              --------->ARR14(2)     --------->ZAT14     --------->ETT(1)                <----------DOF2    <---------ARR14(2)      -   agtcttgtgctctgtgtacttcaatggtcggaaatcaatatattcgtccattactgtttcttttatggactctctctatattcgcatcaaaatgaagaat  21636300                           ---------->DOF2                        --------->ANAC58                        <---------TOE2(3)                     <---------ATHB12                    --------->GLK1(2)                    <---------HSFB2a(2)                 <---------ANAC58         <-------GAMYB  --------->HSFB2a(2)             <---------ANAC58            --------->MYB52(2)             <---------ANAC58   --------->GLK1(2)    --------->GLK1(1)       --------->AHL20(2)         ---------->DOF2--------->ANAC58 <---------MYB46(3)    --------->GLK1(2)  ---------->DOF2 --------->DOF2  <---------ANAC58 <---------LBD16   --------->ARR11(3)----------->GT1   ataaaaggaagaaaagcttgcgaatcaaggaaagtttctgggtttgttgagagagatttcgagagaatcaagaagaaaataaaacaaagtttgaagagat  21636400                                             <---------ANAC58                                             <------MYB46(1)                                             <---------ANAC58                                             <------MYB83                                            <---------DEAR3(1)                                            --------->MYB111(2)                                            --------->MYB55(2)              ----------->GT1               <---------MYB46(3)        <---------CCA1(1)               <---------AtMYB61        <---------RVE1(1)         <---------AHL20(2)       <---------ARR11(3)       <---------CCA1(1)                                            --------       <---------GLK1(2)        <---------RVE1(1)                                            --------       --------->ARR11(3)      <---------ARR11(3)                  <---------YAB1            *TSS   --------->ANAC55(2)         --------->ARR11(3)            <-------MYC3             <-----------GT1   <---------ANAC55(2)         <---------GLK1(2)     ----------->GT1            <---------AHL20(2) -- <-----------GT1           ---------->DOF2 <---------ANAC46  ------->MYC3----------->GT1  --------->ARR14(2)   ttatcacgagattttttggtaacaagaacaaaagatttttttttggtgggtgagagagaaaaacgtgttatgaaacagtgattttttttagcgattcgca  21636500                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                <---------LBD16     --------->AHL20(1)                                            ------>ZmHOX2a(2)      <---------AHL20(2)                                           --------->GLK1(1)       --------->ATHB51                                           <------ZmHOX2a(2)       <---------ICU4                                           <---------GLK1(1)       --------->AHL20(2)                --------->ZAT18           --------->ARR11(3)      <---------YAB1    --------->ARR11(3)                    <---------ARR14(2)      --------->ICU4    <---------ARR11(3)                    <---------ARR11(3)    --------->ATHB51                  ---    --------->ARR14(3)                    --------->ARR14(2)    <---------ICU4                    <--    <---------ARR14(3)                    <-----------ARR10     <--------HAHB4                    <-- ->ANAC58     --------->At4g35610        <------ZmHOX2a(1)     <---------YAB1         ---------->DOF2 ->ANAC58     <---------At4g35610  <---------AHL20(2)          --------->ICU4     <-----------GT1 --- ------->ALFIN1 <---------ZAT18   <-----------TBP<---------LBD16--------->YAB1 <---------ICU4--------   agtggagaccttctctagctcactcttgaaatgctaatttataggatctcttcggggttttagccataattattttattcatttttacaaaagtaaacaa  21636600                                 <---------YAB1                            <---------AHL20(2)                           --------->AHL20(2)                        --------->ICU4                       <---------AHL20(2)                 <---------ZAT2                       <---------AHL20(1)                 <---------At4g35610                      --------->YAB1             <---------ANAC58                              ------              <---------AHL20(2)<---------ARR11(3)   --------->HSFB2a(2)       <-----------HVH21----- ------>AHL20(1)     <---------AHL20(2)          <---------ANAC58      <---------At4g35610     <----- -------AHL20(2)    --------->AHL20(2)       <----------DOF2      <----------DOF2              ------ -------AHL20(1)  <---------AHL20(1)        <---------ANAC58     <---------ANAC58           <-------- ------>AHL20(2)  --------->AHL20(1)        <---------ANAC58     <---------ANAC58--------->ATHB12 ---->CBF    --------->AHL20(2) --------->ARR11(3)   <---------HSFB2a(2)    ------>ZmHOX2a(1) <------   taaattcgaaaactatataatatataatatttaatatcatttgatttctttccttgtcgaagctgtttctttccgctcctccatcagtggcatttttccg  21636700                                                                                                 <---                                                                   <-------TEIL                ------                                                               --------->LBD16                <------                                                               <------NtERF2                  -------                                                               ------>NtERF2                  <------                                                              --------->DEAR3(1)              -------                                                              --------->RAP2.6(2)             -------                                                              --------->RAP2.3(2)             <------                                                             --------->ATERF1(1)              <------                                                             <------NtERF2                    -------                                                             --------->RAP2.3(1)              -------                                                            ------>NtERF2                    --------                                                            <---------ATERF1(1)              --------                                                           --------->ANAC58                  >>>>>>>>                                                           <---------DEAR3(1)                >>>>>>>>  <-----------GT1          <---------ANAC58                --------->ANAC58                  <------- --------->AHL20(2)        <---------ANAC46               --------->SPL7                     >>>>>>>> <---------AHL20(2)        <---------ANAC58             ----------->HVH21                    <------- --->ANAC46               <---------LBD16               <---------SPL7                       <------- ---->LBD16            <---------HSFC1(2)             --------->ANAC46                       <------- ----ANAC55(2)        --------->MYB52(2)              --------->ANAC55(2)               ----------->HVH21 --->ANAC55(2)        --------->MYB111(1)             <---------ANAC55(2)--------->At4g35610 -------- ---GT1               ----------->ARR10              <---------LBD16--------->YAB1    ----------->GT1 ---LBD16            <--------P           ----------->GT1<---------ATERF1(1)       <---------AtLEC2   taattaactacaaaactccaagggtagtttcgggtataagagagttgtttaaaaatacgggacgccgcattcatgagcgcaagtcgcatggtgacacgtg  21636800                                                                                ----------->HVH21                                                                               <-----------HVH21                                                                               ------->MYC3 --------- ---NtERF2                                                                     <-------MYC3 <-------- --->ALFIN1                                    <---------ANAC58               <---------ANAC55(2) -MYC3                                         <---------ANAC46               <---------O2 --------->ARR14(2) >MYC4                                         <---------ANAC58               <---------TGA1a -MYC2                                     <-------PIF5                       --------->TGA1a ->ABF1                                    ------->MYC3                       --------->bZIP60(1) >MYC2                                     <-------MYC2                       <---------bZIP60(1) -PIF5                                     ------->MYC2                       <---------bZIP60(2) -MYC4                                     <-------MYC3                       --------->bZIP60(2) >PIF5                                     ------->PIF5                       --------->O2 <---------ARR14(2) >MYC3                                    <---------ANAC58                    <---------ANAC46 ->TGA1a                                  --------->ALFIN1                    --------->ANAC58 ->O2                                  <------NtERF2                          <---------ANAC58 >>HY5  <---------CCA1(1)            <---------WRKY12                         <---------ANAC58 >>ABI5--------->ARR11(3)            ---------->CDC5                          --------->ANAC58 --ANAC55(2)                       <-----------HVH21                          --------->ANAC55(2)  -- >>AtMYC2              ------>ZmHOX2a(1)  <---------ANAC58                    --------->ANAC46    <-- --O2  <---------ARR11(3)     <---------At4g35610                           <-------------DYT1 <----- --bZIP60(2)       ------>ZmHOX2a(1) <---------WRKY38(1)                   ----------->HVH21--------- --TGA1a<---------RVE1(1) ------->TEIL <---------At4g35610                <-----------HVH21--------->ARR11(3) ->ANAC55(2)  ---------->ID1  --------->At4g35610                     <-------TEIL         <---------ARR11(3)   gcgatattagatatttggctccttcctgtatgtgctgagtcagcgcgtggcttctagtctcgaatttcgcgattcatgtcacgtgacccccaagataccc  21636900                                                                                                 <---                                                                                                 ----                           <----------DOF2                                                       <---    <---------MYB52(1)    <---------DAG2                                                       ------   --------->LBD16       ----------------->AG                                                  ------  --------->LBD16      <-----------GT1                                                         ------ <---------LBD16    --------------->AtSPL8                                                   -------- >CCA1(2)        <---------AHL20(2)                                                          <------- -GLK1(1)   <---------AHL20(2)                                                             <--------- ------->PCF5   <---------AHL20(2)                                                        <---------- ---------HVH21 --------->AHL20(2)                --------->YAB1<---------AHL20(2)    --------->AHL20(1) ----LBD16 <---------AHL20(2)                  --------->YAB1   <-----------GT1       --------->AHL20(2) >GLK1(1)  --------->AHL20(2)      <---------AHL20(2)--------->YAB1                   <---------AHL20(2)   ggtcccggtttttttaaatttttttttacctttttagtttatttgatactaataataaaaacaaatttacttactacttctcaacaaattttttatcact  21637000  Previous    Next  AGI:  At5g53290.1    Description:  CRF3 (CYTOKININ RESPONSE FACTOR 3); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor CYTOKININ RESPONSE FACTOR 3 (CRF3) [Arabidopsis Thaliana] (GB:Q9FK12); similar to CRF4 (CYTOKININ RESPONSE FACTOR 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G27950.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74147.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 21635039    to: 21636493    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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