Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------At4g35610                                                                      <---------ANAC58                                                                      <---------ANAC58      <-------TEIL                 <---------ZAT14                              --------->At4g35610          --------->ARR14(2)   --------->TOE2(3)                   --------->WOX13(1)     <---------At4g35610          <---------ARR14(2) --------->ARR11(3)                 <-----------HVH21       <-----------RAV1(2)            <--------- <---------ARR11(3)            <------ZmHOX2a(1)       <---------AtLEC2    --------->At4g35610     <-   caagaccttagaactagagaatagtgagcctaaggacatgtcaattagtcttcacttacatggcagatgatgacttgagcaggctgattcgaggttcttc  21620400                                                ------>NtERF2                                               <---------PCF5       <---------ANAC58    <---------YAB1                        --------->MYB52(1)        <---------ANAC58    <---------AHL20(2)         --------->AHL20(2)                   <---------ANAC46         <------MYB46(1) --ARR10                       <---------AHL20(2)    <---------GLK1(2)                       <------MYB83 ---------DOF2        ----------->GT1  --------->ANAC46  <----------DOF2                    ---------   tctttttttattgcaaactctaaattgtagaaattaaaaacacaaaacggggccagagtctttgttaatggagtgtttttagtgaatgtttagttcggtt  21620500                                                            --------->LBD16                                                           ==================================MADS_MADS                                                           --------->HSFB2a(2)                                                     <---------ARR11(3)      <---------------AGL15                                                     --------->ARR11(3)     ----------------->AGL1                                                    --------->YAB1        ----------->GT1                            <---------ICU4         <---------ATHB12----------->GT1                           --------->ICU4          --------->ICU4 ----------->GT1              ------                         --------->YAB1      --------->ARR14(2)  --------->DAG2             ---------                <-----------GT1              <---------ARR14(2) ---------->DOF2         ----------->GT1               <---------YAB1              ----------->GT1 --------------->AGL15      ---------->DOF2 >MYB59     <---------ARR11(3)            <---------ANAC46 <---------HSFB2a(2)       <------ZmHOX2a(1)   tagctctaaaccaagttattacaactctcataatgaaattagggacggatacaatgatcatccagaaaaaggaaaattgcaaaaacaggaaagtaaatca  21620600                                                                                                   --                                                                                                   <-                                                                                                -----                      <----------DOF2                               <---------MYB52(1)       --------                      --------->TOE2(3)                          <------------MYB.PH3(1)    <--------                 <----------DOF2                                <---------At5g28300         ---------            --------->GLK1(2)             <---------At4g35610  --------->MYB52(1)          <---------AHL20(1)           <---------ARR14(2)             --------->At4g35610  <-----------GT1             <---------AHL20(2)           --------->ARR14(2)             --------->ZAT2   <---------ICU4                  --------->AHL20(2) --->YAB1----------->ARR10                <---------ZAT2  --------->ICU4            --------->TOE2(3) >WOX13(1) <---------GLK1(2)  ------>ZmHOX2a(1)           <---------YAB1   ----------->GT1 --------->AHL20(1)   aaaccaggctggagattctcttttctttaatccttctcagacacagcttagaaacagaacataattaaccgtttctctcgttaaaacctctaatttaata  21620700                                    ------>MYB46(1)                                -------->P                                ------>MYB83                                ------>MYB46(1)                                --------->ANAC58                                --------->ANAC58                              <---------MYB46(2)                              --------->AtMYB61                              <---------MYB55(2)                <---------AHL20(2)  -------->P               --------->AHL20(2)   ------>MYB83               --------->AHL20(1)--------->MYB46(3)               <---------AHL20(1)<---------MYB52(2)               <---------AHL20(2)<---------MYB55(2)              --------->YAB1  --------->MYB46(3)             <---------YAB1   --------->DEAR3(1)       <---------AHL20(2)     <---------MYB111(2)     <----------DOF2        ------->TEIL     --------->TOE2(3)    ------->GAMYB                                           <------NtERF2  <---------ARR11(3)     --------->ANAC46                                       --------->PCF2  --------->ARR11(3)     --------->ANAC58 --------->ATHB12                      <---------TCP15(1) ------->AHL20(2)   --------->YAB1------->GAMYB                                 --------->PCF5 --------AHL20(2)--------->YAB1--------->MYB55(1)                               <---------TCP20 ---->YAB1  --------->AHL20(2)<---------MYB111(1)                 <---------GLK1(1)   <---------GLK1(2) ->YAB1--------->AHL20(2)--------->ANAC58--------->ICU4          --------->ARR14(2)----------->RAV1(1) -AHL20(2) <---------AHL20(2)--------->MYB46(3)                  <---------ARR14(2)<---------ALFIN1 >AHL20(2) --------->AHL20(2)--------->DEAR3(2)                 <------ZmHOX2a(1)--------->TCP23   ataaaatctttaattaatataatgacaacgcaccaaccaactagtgattagagtttgagacagagaggatttgtgtattatggccccacattctctgtgc  21620800                         <---------At4g35610                         --------->At4g35610                 ------>MYB46(1)              *TSS                 ------>MYB83                --------->WOX13(1)                 -------->P                <---------ATHB12                                 ---------               ------->GAMYB   <---------At4g35610          <---------ANAC58        --------->ANAC46              --------->MYB46(3)  <---------At4g35610       <---------ANAC58   --------->GLK1(2)            <-----------GT1    ------>ZmHOX2a(1)     <----------DOF2        ----------->ARR10    ----    <-----------GT1  <----------DOF2       ------------>CBF --------->TOE2(3) <---------GLK1(2) <----   catgttttactatttaaccaactctttagcttcctctgctcttccatcaatcggtcttttttccttgatttttctggtgagattctacaaaaccaaaaga  21620900                   --------->LBD16         <------NtERF2            --------->YAB1                <---------SPL7            <---------ICU4               --------->bZIP60(1)           --------->KAN4(1)             <---------bZIP60(1)         --------->ANAC46           --------->ICU4                <---------ANAC46        --------->GLK1(2)          <---------KAN4(2)      <---------TOE2(3)              <---------ARR14(2)        <------NtERF2          ---------->DOF2                  <---------GLK1(2)           <--------      --------->LBD16         --------->CCA1(2)         <---------ANAC58                 <---------LBD16     <---------LBD16         --------->ARR11(3)         <---------ANAC58 ------>NtERF2--------->At4g35610 ->DOF2--------->LBD16   ---------->DOF2 <---------ANAC58 <---------MYB52(1)   <-----------TGA1 ----->GLK1(2)   <---------LBD16--------->DAG2 --------->LBD16  --------->ARR14(2)  <---------ICU4<-- -----GLK1(2)   --------->MYB52(1)       <---------ANAC58<-------GAMYB  --------->DEAR3(1) --------->LBD16   ttccttcgccggaataatcaccggagataaagataaaggaatggcgtccctgaaatttccgttggagattctcgccgtcttcgtcatcatctccgtgatt  21621000                                              <---------ZAT2                                              --------->MYB46(3)                                              --------->ZAT2                                             ------>MYB46(1)                                             --------->MYB52(1)                                             -------->P                                            --------->MYB55(1)                                            <---------ALFIN1                                           --------->MYB46(3)                                           <---------MYB111(1)                                           <---------MYB55(2)                                           <---------MYB111(2)                                           --------->DEAR3(1)                                          --------->DEAR3(2)                                          --------->ANAC58                                          --------->ANAC58                                         --------->RAP2.3(3)                                         --------->PCF2                                        <---------ALFIN1                                       --------->LBD16                                      --------->ANAC58                                      --------->ANAC58                                      --------->ANAC46                                     <---------LBD16                                 --------->ZAT2                                 <---------ZAT2                                 --------->At4g35610                     <---------ARR11(3)                                 <---------At4g35610              <---------TOE2(3)                                ------>NtERF2------>MYB83         <---------TOE1(2)                                <---------ATERF1(1)   ----------->GT1    --------->ARR11(3) -MYB52(1)                  --------->ANAC46--------->ANAC46      <---------TOE2(2)---------->DOF2 --------DOF2           <<<<<<<<<TBF1<XXXXXXXXXXXXXXXXXXXXXXXMIR404 <------ZmHOX2a(1)   cttttgccgattgctcaatctcattcttcttcgccagctcccgcacccaccagcgatggtattaatcttaggataaatctttcattagagccaattttgt  21621100                                                                                               <-----                                                                                             --------                                                                                             --------                                                                                <---------ANAC58                                                                                <---------ANAC58  <--                      --------->ANAC58                                  --------->LBD16      <-------                      --------->ANAC58                                <-----------RAV1(2)   <--------                 <----------ID1                                      <------ZmHOX2a(2)      <--------         --------->ARR14(2)                                         <---------AGP1 <---------TOE1(2)<         <---------ARR14(2)              ---------->ID1             --------->ARR11(3)      ---------        <---------CCA1(2)     --------->ARR11(3)        ====================HOX2a_HOX2a    <---------TOE2(3)   <-----------GT1<------ZmHOX2a(1)--------->ATHB12     <------ZmHOX2a(1)       <---------ANAC46<----   ttttaaaaccctatcttggaggacaagaaattgatattgatttgttttttttttggcaggaacatcgatagatcaggggatagcgtatgttctaatgatg  21621200                                        ==========================HOX2a_HOX2a                                       ===========================HOX2a_HOX2a                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                      ------->TEIL                                   <---------WOX13(1)                                --------->ALFIN1          --------->WRKY45      ----------->HVH21          --------->WRKY12    <---------ANAC58          --------->WRKY38(1) --------->bZIP60(1)  <----------DOF2             <---------bZIP60(1)  ======================================bZIP_DOF <---------ANAC46             <---------ANAC58 <---------ANAC58             --------->ANAC55(2) <---------ANAC58             <---------TGA1a                                                <------- ----AtMYB61                  <---------ANAC55(2)                                       ----------->GT1 ->YAB1  --------->DOF5.7(2)  --------->O2                                              <---------ZAT6 >HAHB4 ================================MYC_MYB                                       <---------ANAC46 -------RAP2.6(2)             <---------ANAC46                                      <---------ZAT14 --ICU4<---------ANAC46       <---------O2                                          --------->ZAT14 -ATHB12<-------GAMYB         --------->TGA1a                              <----------DOF2 <--------- -YAB1 <---------ANAC58    ----------->HVH21======================HOX2a_HOX2a      <---------ZAT6 ------NtERF2             <---------WOX13(1)<------ZmHOX2a(2)   <---------ICU4<---------ANAC58 >ICU4 <---------ANAC58 --------->ATHB12------>ZmHOX2a(2)       --------->YAB1<---------ANAC58     == -----MYB46(3)     <---------AHL20(2) <---------ARR14(2)   ------>ZmHOX2a(1)  <---------ANAC46     <-   gtggctttggcgttgacttatttcattcattgacgtgatggatccgatctatttgttcttcctccataatggtttgtctttcgtagtgttgtgttacaat  21621300  Previous    Next  AGI:  At5g53250.1    Description:  AGP22/ATAGP22 (ARABINOGALACTAN PROTEINS 22). Identical to Arabinogalactan peptide 22 precursor (AGP22) [Arabidopsis Thaliana] (GB:Q9FK16); similar to AGP41 [Arabidopsis thaliana] (TAIR:AT5G24105.1); contains InterPro domain Protein of unknown function DUF1070 (InterPro:IPR009424) Range:  from: 21620846    to: 21621457    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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