Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                     ---------->DOF2                          -------             --------->TOE1(3)              <---------YAB1                            <<<<<<<<<<<<<<<             --------->TOE2(3)           <------ZmHOX2a(2)                         <---------O2            --------->At4g35610         <---------ARR14(2)                         --------->ANAC55(2)            <---------ANAC55(2)         <---------ARR14(3)                         <---------ANAC55(2)            <---------ANAC46            --------->GLK1(2)                     <---------HSFB2a(2)         --------->DOF5.7(2)            --------->ARR14(2)                    --------->HSFB2a(2)         <---------MYB52(1)             <---------AGP1                 --------->GLK1(2)      <------       --------->ANAC46                 --------->ARR14(3)           <---------AHL20(2)       <------      <---------TOE2(3)                 <---------ARR11(3)        --------->AHL20(2) ----------->HVH21     <---------DOF5.7(2)                --------->ARR11(3)       --------->AHL20(2)----------->GT1   --------->DOF5.7(2)                 <------ZmHOX2a(1)         <---------AHL20(2)<---------ANAC58  --------->TOE2(3)        ---------->DOF2------>ZmHOX2a(2)  --------->AHL20(2)    <---------ANAC58   acaacgtaaacgttacctgaaaaaaaaaaaaaagagaggcaggatcttgataaaccaaagaaatcaaataaataatctttctataacgtgacaatggagt  21543100                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                         <------NtERF2                                                                                       <---------ANAC46                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                      <---------LBD16                                                                                    --------->DAG2                                                                                   --------->DAG2 ---ANAC58                                                                        ---------->DOF2 ---->GT1                         <---------ATHB51                            --------->ANAC46 <<LFY        --------->ARR11(3)  <---------AHL20(2)                          --------->ANAC58 ---ANAC58<---------ICU4  <---------MYB52(1)      --------->MYB46(3)          <----------ID1 ---ANAC46--------->YAB1----------->GT1--------->YAB1   --------->GLK1(2)     --------->ANAC58   gaaaacaaacaattaagacattcaagtcgttactaaattattcaaaattctaaccaagaatttgcaaacacacatattatacgaaaaaggcgggttctca  21543200                  <--------HAHB4                  <---------ICU4                  --------->ATHB12                  --------->ATHB51                  --------->YAB1                  <--------ATHB1                 <---------ATHB12                 <---------ATHB51                                <---------AHL20(1)                 --------->ICU4                                  <---------AHL20(2)                 --------->AHL20(2)                              --------->AHL20(1)               <--               <---------------AGL15                            --------->AHL20(2)                ---               --------->YAB1                             ------>MYB46(1)                    <-------               --------------->AGL15             --------->AHL20(2)                          <-------             ------------>CBF                    <---------AHL20(2)<------------CBF      --------->At4g35610            --------->YAB1                    --------->WOX13(1)--------->YAB1       ------->GAMYB<--         --------->YAB1          --------->ICU4 <---------ATHB12<---------AHL20(2) --------->RAP2.6(3)      --------->YAB1--------->ICU4          ------------>CBF--------->AHL20(2)    --------->MYB52(1)      ----------->GT1<---------ICU4   <---------AHL20(2)  ------>MYB83         <---------REM1(1) <---   tgtagtaatagtaataacaataattagtactagtaattagttaatggtcaattaatgaccaactaattatattgttgtaagttgtaacggcagacgaagt  21543300                                                                                      --------->AHL20(2)                                                                                      ----------->TBP                                                                                    <----------DOF2                                                                                  <---------YAB1                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                                                                 <-----------GT1                                                                                --------->YAB1                     <------NtERF2                                           <--------HAHB4       ------>MYB46(1)       <----------DOF2                                 <--------ATHB1       ------>MYB83  ----------->HVH21                                       -------->HAHB4       -------->P   <-----------HVH21                                        --------->ATHB51 -------ANAC55(2)  <---------ANAC58  -------->P                              --------->YAB1 ------>ANAC55(2)  --------->bZIP60(1)                                       <---------ICU4 --------AtSPL3    <---------bZIP60(1)                      <---------ANAC46<---------YAB1 --------AtSPL8    <---------ANAC58 --------->MYB52(1)      <---------ANAC58<---------ATHB51 -------ANAC46<---------TOE1(1)   <---------MYB46(2)        <---------ANAC58--------->ICU4        <-- ----TEIL     <---------TOE2(1)   <---------MYB52(2) --------->YAB1    --------->ANAC46    <---------   acgtataccaacaagtccgaggcgtcacaggctttaactaacccaaaaatgtttatcatgttccttgatttcgacgtaataattatctttatataacagg  21543400                                                                                                   --                                      --------->ZAT18                                              >>                                      <---------ZAT18                               --------->YAB1 <-       <---------AHL20(2)             --------->ZAT14                              --------->ICU4  >>     <----------DOF2          <---------YAB1                                     --------->YAB1    >>   ---------->ID1           ----------->GT1                                   >>>>>>>>>TBF1        >> --------DOF2               <---------ANAC46          >>>>>>>>>TBF1    --------->At4g35610      ----- --GT1 --------->AHL20(2)--------->ALFIN1--------->ZAT6                <---------At4g35610    <------   cttttgtctttaattctctctatagatgtgttgtgatttgtgaactctagagagaagaagaagatgagtagtgagatgaagaagaatgatggtttagggt  21543500      <---------MYB46(3)   <---------ANAC46  --------->ATHB12 ------->ARR14(2)           <---------ANAC46 >>>>>>>GATA-3           <-----------RAV1(1)                  --------->At4g35610 --------ARR14(2)       <---------TOE2(3)                     <---------At4g35610 >>>>>>>GATA-2    <---------MYB46(3)                   <---------ICU4 >>>>>>>GATA-4    <------MYB46(1)                     --------->ICU4                              <-- >>>>>>>GATA-1    <------MYB83            <----------DOF2   <---------ANAC58                  <------ ---->ALFIN1      ----------->GT1      --------->GLK1(2)    <---------ANAC58               ------>ZmHOX2a(1) ---ANAC46     <------ZmHOX2a(1)      <---------GLK1(2)--------->YAB1                <---------At4g35610   ggattcagtggatgagaggatggtttaatgttgtgcaagagattcttttgcagagaataatggcttctcacttacaaattccatttcatcttcctccttt  21543600                                                        <------MYB46(1)                                                        <------MYB83                                                     <---------MYB52(1)                                                  --------->ZAT18                                               ----------->HVH21                         <---------ANAC58   --------->ANAC46                           --------->LBD16                            <---------ANAC58 ---------GT1                                 --------->HSFB2a(2)                   <----------DOF2 ----DOF2       <-----------HVH21           <------NtERF2                      <----------DOF2      <   aaaccacttaacttgtattgtcactggctcaactagtggcattggctccgagaccgctaggtcccaaatcgaaaacataaactttcctttagcgtcttat  21543700                              ----------->GT1                <---------ZAT18                  <------                        <---------WOX13(1)                   <---------ZAT14               <------MYB83                     <---------YAB1                          --------->ZAT18               <---------At4g35610                <---------MYB46(3)                        <---------ANAC58                 <------MYB46(1)              <-------GAMYB   ------>ZmHOX2a(1)           <---------ANAC46                <---------MYB46(3)             <-----------RAV1(1)   ------->TEIL  --------->ATHB51<----------DOF2     <---------At4g35610 ------------------------ANAC81   <---------CCA1(2)       <---------ANAC58--------->ANAC46--------->ALFIN1   tttgtttttgtttttctgttgttgtgattgtcctgtgaatcttataatgcataatttgttgtgtgaactttgttttaggcaacttgcagaggctggtgct  21543800                        ---------->DOF2                 <------ZmHOX2a(1)               --------->MYB59            <-------GAMYB           --------->MYB55(2)           <---------DEAR3(2)           <---------MYB46(3)          <---------ANAC46          <---------DEAR3(1)          <---------At4g35610                  <---------MYB46(3)          <---------RAP2.6(2) <---------At4g35610                         <---------ZAT6        ------------>AtMYB77  --------->At4g35610                    <---------At4g35610<---------ALFIN1 ---At4g35610<---------MYB52(1)       --------->At4g35610       --------->ZAT18    <---------GLK1(1)<   catgttgttatggcggttaggaacataaaagcagctcatgagctgattcaacaatggcagaccaagtggtctgctagtggtgagggactcccacttaata  21543900                               --------->YAB1                               <---------ICU4                              <---------YAB1                                  --------->WOX13(1)                              --------->ICU4                    --------->AHL20(1)                            --------->YAB1                      <---------ARR11(3)                       --------->AHL20(2)                       --------->ARR11(3)                  <                       <---------AHL20(2)       <---------AHL20(2)       <---------AHL20(2)        --               <---------WOX13(1)              <---------AHL20(2)    --------->AHL20(2)     ---------            <---------YAB1 <---------AHL20(2)  <---------AHL20(1)    <---------AHL20(2)   --------->YAB1 ----------->GT1    <---------ICU4             --------->AHL20(2)--------->AHL20(2)   <---------AHL20(2) ---------TOE2(3) <---------TOE2(3)      <-----------GT1        <---------AHL20(1)    --------->AHL20(2)   ttcaggtaaaatttttgattaatatttatataatcatggcgattttcaatttttttttggataaaaaatatttaaataatccatcaaatttatcaaaagt  21544000  Previous    Next  AGI:  At5g53100.1    Description:  oxidoreductase, putative. similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G53090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68364.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 21543476    to: 21545549    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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