Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ---------->DOF2                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                                   <---------AHL20(1)                                                                   --------->AHL20(1)                                                                ------>MYB46(1)                                                                ------>MYB83                                                              --------------->AGL15                                                              <---------MYB59     <---------ZAT18                                         ========================================     --------->ZAT18                                      <---------ARR11(3)     <---------ZAT14         --------->TOE2(3)            --------->ARR11(3)                  ------>ZmHOX2a(1)     --------->ZAT14        --------->REM1(1)  <---------YAB1----------------->AGL3          --------  <---------At5g28300   <-----------HVH21--------->MYB46(3)--------->CCA1(2)     --------->YAB1    <- <-----------GT1---------->DOF2 --------->WOX13(1)    ---------->DOF2 <---------YAB1   --------->ZAT14   aaattactgcacattaccaaaagctctgttacatcaatctctaacaactctcattgaaaagataccaaatttattaaagtctataacagtgtaatcctca  21526400                                                                --------->ZAT2                                                                <---------ZAT2                                                                --------->At4g35610                     --------->ANAC58                           <---------At4g35610                --------->ANAC58                          ------>MYB46(1)                --------->ANAC58                          ------>MYB83         ----------->RAV1(1)     <------ZmHOX2a(1)      <---------MYB59    --------->WRKY38(1)        <---------TOE2(3)        --------->TOE2(3) ========================================================================MADS_MADS              ===== ->TOE2(3) --------->ZAT6    ---------->DOF2           ----------------->AG   <---------MYB59   ----- --------ARR11(3)    --------->ANAC58                <-----------GT1          <---------MYB52(2)-----   atatcgttgtccaacactaagccaagcactacaaaggatgcttagaagttcaaattaacctaattgagctgagcaatggaactaactaggtcgtattcct  21526500                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                        --------->GLK1(2)                         <---------ANAC58                        <---------YAB1               <------ZmHOX2a(2)                              <---------AHL20(2)          ---------->DOF2<---------ANAC58                     <---------YAB1                 <-------   <-----------RAV1(1)<----------DOF2                      <---------RVE1(1)                 -------- =====================HOX2a_HOX2a                         --------->ARR11(3) <---------MYB52(1) ->ZmHOX2a(1) <---------ARR11(3)                          <---------GLK1(2)<---------ANAC55(2) <----- ---->LBD16   --------->ARR11(3)              ------->TEIL<---------ARR11(3)--------->LBD16  <-------   ggtttatgtgggcaaagatcgagactttcgagtctattccttcaaatgtatcagacccaagatttttattatcgaatccgtatgttctaatttcagattc  21526600                                        <---------YAB1       --------->ANAC55(2)             --------->TOE2(3)       <---------ANAC55(2)            --------->ATHB12       --------->ANAC46               -------->ATHB1       --------->ANAC55(1)            <---------ICU4       --------->ANAC58               <--------HAHB4                        --------->ANAC58 --------->MYB46(3)                   --------->YAB1            ----------------->AG --ARR14(2)                          <---------ATHB12           ----------------->AGL1 ->ARR14(2)                    --------->At4g35610            <-----------GT1  ---------->DOF2 <----- --TEIL--------->ANAC58        <---------At4g35610    ----------->GT1       --------->ANAC58   ------ --GLK1(2)                ---------->DOF2           --------->GLK1(2)     ---------->DOF2    <-------   agaacaaacacgttacgaacaattgaaacaaagagctgaatcattagagagaagaatcgaaattttcccaaatcagagaagcaaagtaagagaatttaca  21526700                                                                                                <----                                                                                             <-------       ------>MYB83                                          --------->ARR14(2)      <-----------HVH21       ------>MYB46(1)                                       <---------ICU4         <---------ANAC46 ----HSFB2a(2)             --------->YAB1    <------ZmHOX2a(1)                    ------>ZmHOX2a(1) < --->HSFB2a(2)    <---------TOE2(2)  <---------MYB46(3)      <---------ARR14(2) ----------->RAV1(2)<- ----GT1          <---------TOE1(2)  --------->MYB111(1)<------NtERF2 ------>ZmHOX2a(1)<---------WRKY12   gaacataccaactaaaatcccatgtttgatcagaacgagtagttgcaggaacagtggcagccatatttgctccttccttccttcctgcgtcaatggaggt  21526800                                   <---------ZAT18                                <---------ANAC58                                <---------ANAC58         --------->TOE2(3)      <---------ANAC46         --------->TOE1(3) --------->GLK1(2)                                             <---------ANAC58 -----ARR14(2)<---------At4g35610  --------->ZAT18                                  --------->YAB1 --TOE2(3) ---------->DOF2<---------GLK1(2)                                        <---------YAB1 ---------LBD16       --------->At4g35610           <------NtERF2               <----------DOF2  <--- --------ANAC46    ---------->DOF2 *TSS     --------->MYB52(1)      --------->MYB52(1)   <---------ANAC58   tttggggaaaaccttaagcagagaagcagaatttgagtgggctacaaaacgggcctcattttttgaagcccaagggccaagacttttcatagcgagacga  21526900                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                         <---------ARR14(2)                                              <---------LBD16                                            --------->ARR14(2)                   --------->LBD16          <---------ARR14(2)                  --------->HSFB2a(2)      <----------TaMYB80                  <---------HSFB2a(2)      --------->KAN4(1)                 <---------LBD16          <---------KAN4(2)<---------ANAC58             ------>ZmHOX2a(1)            ----------->ARR10<---------ANAC58           <-----------------AGL1         ---------->TaMYB80           ----------------->AGL1         --------->ARR14(2)   <---------ANAC58        <---------HSFB2a(1)            ----------->GT1  <---------CCA1(2)<---------KAN4(1)        --------->HSFB2a(1)<---------TOE2(3)--------->KAN4(2)  <---------ANAC58                 -----       <---------KAN4(2) ---------->DOF2  <---------ARR14(2)   <---------AtLEC2<----------DOF2  <---- ---------CBF<----------DOF2  --------->CCA1(2)     ----------->GT1      --------->KAN4(1)     <-----   attgacgagaatgtccttttccggaaacaaaggtatgagaagggtatattcggagagtatatcttgcatgaaggaatattactttgagcctaaactagaa  21527000                                                             --------->REM1(1)         *TSS     <----                                                            <-------TEIL              ---------->DOF2                                                         <---------At4g35610        --------->MYB46(3)        <---------ICU4                                   --------->At4g35610       --------->ANAC58 ---->GLK1(2)                                    ------------>CBF                  --------->ANAC58 -------ARR10                                   <-----------GT1       --------->WOX13(1)   ---------- ----GLK1(2)                  --------->ZAT6  --------->AHL20(2)    <---------YAB1 --------->ANAC46   tctcgtctactcatttcgctatctcttctctatctctaattctgaagattaaacaattcagctacataacatcattcagacattcacccaaagaaaagct  21527100     <---------AtMYB61                    <-----------RAV1(2)    <----------DOF2 <---------At4g35610           <---------ZAT14       ------>ZmHOX2a(1) --------->At4g35610           --------->ZAT14   --------->ARR14(2)     <---------YAB1             <- ------DOF2    <xxxxxxxxxxxxxxxxsmallRNA(le3)    <---------ARR14(2)   --------->YAB1--------->MYB52(2) >DOF2<---------MYB46(3)   <---------ALFIN1--------->LBD16   <---------CCA1(2)<---------ANAC46   ----   ttaagctgtggtttcagacagaagcagtaccactgtaccaggctccaggcatgtcctcttctcatctctttcttataattctgtgtttgtttctgaatta  21527200                                 <---------ANAC46                                 ----------->GT1                      <---------AHL20(2)            <---------ARR11(3)   <---------ANAC58              <----------DOF2            --------->ARR11(3)   <---------ANAC55(2)        <---------ARR11(3)   <---------TOE1(2)  <---------ICU4                        --------->ARR11(3)                     --  <---------ANAC58   --------->AHL20(2)                   ------->TEIL                             --  <---------ANAC58   --------->ICU4                ------>ZmHOX2a(1)     --------->AHL20(2)        <- --------ZAT18------>ZmHOX2a(2)  <---------ANAC58 --------->TOE2(3)    --------->TOE2(3)          <-- ----->At4g35610----------->GT1  --------->ANAC55(2)   <---------YAB1<-------TEIL           <-------TEIL   gctcgcttgttcatgatcttgtaataaatattgtttcgtaactagaagctatccttcatgaatgtctttgatacattaaaaacatgttgaaagattcatg  21527300  Previous    Next  AGI:  At5g53045.1    Description:  similar to Os02g0305800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046636.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48637.1); contains InterPro domain Transcription factor Pcc1 (InterPro:IPR015419) Range:  from: 21525611    to: 21526835    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g53048.1    Description:  other RNA Range:  from: 21527087    to: 21529076    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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