Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<------
MYB46(1)
<------
MYB83
<
<---------
RVE1(1)
<----
<---------
CCA1(1)
<-----
<---------
AHL20(1)
--------->
ARR11(3)
------
<---------
ARR11(3)
--------->
ARR14(2)
------
--------->
ARR11(3)
<---------
CCA1(2)
<-----
------->
GAMYB
<---------
ANAC58
<---------
MYB46(3)
------>
NtERF2
--------->
MYB52(1)
--------->
AHL20(1)
----------->
ARR10
<---------
MYB52(1)
------>
NtERF2
----------->
RAV1(1)
---------->
DOF2
<-----------
RAV1(1)
<----------
DOF2
--------->
At4g35610
--------->
ANAC46
<---------
ANAC58
<---------
TOE2(3)
<---------
ARR11(3)
--------->
ANAC46
-
aaaaatccaaacaacagagactcaattgcatac
caaaagatatttgagattgttggtgctaatatcttctttagtctcgttagacgaaaacagcgccagc
21504800
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR11(1)
<---------
ARR14(2)
<-----------
ARR10
--------->
ARR11(3)
<---------
CCA1(2)
--------->
YAB1
<------
ZmHOX2a(2)
--
--------->
LBD16
-------
---------
HSFB2a(2)
--------->
MYB52(1)
--------
-----
GLK1(2)
------>
ZmHOX2a(1)
<---------
MYB52(2)
<-------
----
ZAT2
--------->
At4g35610
--------->
MYB46(3)
--------->
LBD16
--->
ZAT2
--------->
ARR11(3)
>>>>>>>>>
MYB98
--------->
LBD16
--->
At4g35610
<---------
ARR11(3)
------>
ZmHOX2a(1)
--------->
ANAC46
----
At4g35610
<---------
HSFB2a(2)
<---------
ARR11(3)
---------->
DOF2
<---------
LBD16
-------->
HSFB2a(2)
--------->
HSFB2a(2)
--------->
ANAC46
---------->
DOF2
--------->
LBD16
ttcccgatcatatcttcgcacttctgaaacatctcacatcctttcttcacaacatc
ctaacaaaccaaaggaaaagaatgaactaagcatccccggaaat
21504900
------
<---------
AHL20(2)
<-----
--------->
ARR14(2)
--------->
ARR14(2)
--------->
HSFB2a(1)
----------->
GT1
<---------
GLK1(2)
------->
TEIL
---------->
DOF2
<-------
--------------->
AGL1
<---------
ARR14(2)
<---------
ARR14(2)
--------->
At4g35610
-->
GLK1(1)
--------->
GLK1(2)
--------->
GLK1(2)
<---------
HSFB2a(1)
->
ARR14(2)
<---------
ARR14(2)
<---------
ARR11(1)
<---------
HSFC1(2)
--
ARR14(2)
--------->
ARR14(2)
<---------
ARR14(1)
--------->
HSFC1(2)
gtccaattcagtaaaaactcgcgattcggattcgaaatacccatttcagataaacaccctaatcgaatctgtatataaaaaagaggtagaagcttccac
c
21505000
-----
-----
-----
----------
<----------
<---------
MYB55(2)
--------->
MYB46(3)
<xxxxxxxxxxxx
<---------
ANAC58
--------->
ANAC58
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC46
--------->
ZAT2
<---------
ARR14(2)
------>
MYB46(1)
--------->
GLK1(2)
<---------
STY1(2)
--------->
ARR14(2)
------>
MYB83
--
--------->
ANAC46
<---------
ZAT2
--------->
GLK1(1)
--------->
ANAC58
----->
RAV1(2)
--------->
STY1(2)
<---------
GLK1(1)
--------->
AtMYB61
----
At4g35610
------>
ZmHOX2a(1)
---------->
DOF2
<---------
MYB55(2)
--
ALFIN1
<---------
GLK1(2)
------->
TEIL
<-----------------
AGL1
--------->
MYB46(3)
tgatcaacaccagactctgaagcagcaagatgaattttcctagcttgctcgaatagcaccgataaaggcatttcctccatagccaaaccacccat
cacag
21505100
<----------
DOF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
---->
ANAC46
--------->
ARR11(3)
---->
ANAC58
<---------
ARR11(3)
---->
ANAC58
------>
ZmHOX2a(1)
--------->
GLK1(2)
<------
ZmHOX2a(1)
->
HVH21
--------->
TOE1(3)
--------->
ANAC58
--------->
HSFB2a(2)
<---------
TOE1(3)
-
HVH21
--------->
TOE2(3)
--------->
ANAC58
<---------
HSFB2a(2)
<---------
TOE2(3)
xxxx
smallRNA(s)
--------->
ARR14(2)
--------->
HSFC1(1)
--------->
AHL20(2)
--------->
RAV1(1)
<---------
ARR14(2)
<---------
HSFC1(1)
<---------
AHL20(2)
<-----
gcaacaattcaaaattccttaatgaaatcgaatccacaagaatcgagtttcttcgagaagaggatcgtcttttgaatttttttagggttccaaatcgaaa
21505200
<---------
At4g35610
--------->
bZIP60(2)
--------->
TGA1a
<---------
O2
--------->
O2
--------->
ARR11(3)
=========================
MYC_MYB
<-------
GAMYB
--------->
LBD16
======================================
bZIP_DOF
--------------->
AGL15
------>
NtERF2
<----------
DOF2
<---------
ARR11(3)
<-----------------
AGL3
<---------
At5g28300
--------->
ARR11(3)
<---------
TOE2(3)
<----
<---------
ARR11(3)
----------->
ARR10
<-----
--------->
ZAT14
--------->
REM1(2)
<---------
MYB46(3)
--------->
At4g35610
<---------
ZAT14
================================================
MYC_MYB
<---------
ZAT18
--------->
MYB46(3)
<---------
DEAR3(2)
<-----------
RAV1(2)
--------->
ZAT18
<---------
At5g28300
<---------
DEAR3(1)
<-----------
TGA1
<---------
At5g28300
----------->
GT1
------->
GAMYB
=============================
MYC_MYB
<-----------
GT1
<------
ZmHOX2a(1)
--------->
LBD16
------------>
AtMYB77
<-----------
HVH21
----
GLK1(1)
*
TSS
--------->
ANAC46
--------->
TOE2(3)
----------->
HVH21
<---------
LBD16
tctgactaatttaccac
gagtacacacagacagaggagagaaaatgttaaccgcgaagagctttataagggacggttgagattttgccgcgtcaggtgaa
21505300
-
-
<
<-
<-
<-
---
<--
<--
--------->
TOE1(3)
---
<---------
ALFIN1
<---
--------->
ANAC46
<----
<---------
ZAT18
<----
<---------
ETT(2)
<----
<------
ZmHOX2a(2)
<----
--------->
AGP1
<-----
<---------
AGP1
<-----
--------->
ARR11(3)
---------
<---------
ARR11(3)
<--------
--------->
ARR14(2)
---------
<---------
ARR14(2)
--------->
AHL20(2)
<----------
----------->
ARR10
<---------
AHL20(2)
<------
ZmHOX2a(2)
<---------
MYB52(1)
------>
MYB46(1)
<---------
ARR11(3)
<---------
RAP2.6(3)
---------->
DOF2
--------->
At4g35610
--------->
ARR11(3)
-----
ANAC46
<-----------
HVH21
--------->
TOE2(3)
------>
MYB83
--------->
YAB1
---------->
DOF2
<-
------------------
TaNAC69(2)
------>
ZmHOX2a(2)
--------->
DEAR3(2)
--------->
ARR11(3)
-------
gtagataactcgaattctattagccgttagatctgtccacaacctcaaaagtcaaaaaccgactcagttgtataaaaatatcaagtcaaagatcaggtgc
21505400
----------->
GT1
<---------
ANAC46
--------->
ZAT14
<---------
ZAT14
--------->
ALFIN1
<---------
REM1(1)
<-------
GAMYB
<------
NtERF2
-------->
MYB55(2)
----->
NtERF2
---------
MYB46(3)
--------
ANAC46
--------
ANAC58
--------
ANAC58
--->
NtERF2
-------
LBD16
----
NtERF2
------>
ATERF1(1)
------
RAP2.3(1)
-----
RAP2.3(2)
<---------
YAB1
-----
RRTF1(2)
--------->
ANAC58
-----
RAP2.6(2)
--------->
ANAC58
-----
DEAR3(1)
--------->
ANAC46
--
TEIL
<---------
ZAT6
------->
TEIL
----
ABI4(1)
------->
GAMYB
>
At4g35610
--------->
RAP2.6(2)
-
At4g35610
--------->
ANAC58
>
ZAT2
----------->
GT1
--------->
ANAC58
--------->
At4g35610
-
RAV1(2)
--------->
DEAR3(1)
<-----------
GT1
<---------
AtLEC2
<-------
--------
DEAR3(1)
------>
NtERF2
------->
TEIL
--------->
TOE2(3)
<-------
-->
ALFIN1
--------->
MYB46(3)
<---------
YAB1
<-----------
GT1
<---------
At4g35610
ggcgggtgtagtgtaaaaccgccacgaatgtgattgtggctatggtatatgaatgtttactgttttttttcttaatttgaatggagatgaaattttcttg
21505500
--------->
At4g35610
--------->
ANAC46
--------->
At4g35610
--------->
ATHB12
---
--------->
ANAC46
--------->
LBD16
<---------
YAB1
---
--------->
MYB46(3)
<---------
ANAC46
---------->
DOF2
--
ANAC58
<---------
YAB1
--------->
PCF2
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
ETT(2)
--
ANAC58
<------
ZmHOX2a(1)
<---------
ZAT18
<---------
At4g35610
<---------
ZAT6
--------->
ETT(2)
<
atttttgtacgagtaggagtatgaataaactagtatcgcacccgctgtctaagcagcccgaattgtcgtagtgttattgattcgatcgacctatagcagt
21505600
------->
GAMYB
===================
HOX2a_HOX2a
------>
ZmHOX2a(2)
--------->
MYB46(3)
<------
ZmHOX2a(2)
<---------
MYB55(2)
====================
HOX2a_HOX2a
<---------
ARR14(2)
<---------
ARR14(2)
<---------
MYB52(2)
--------->
ARR14(2)
<---------
At4g35610
<---------
MYB111(2)
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
ARR11(3)
<---------
ANAC46
--------->
TOE2(3)
--------->
At4g35610
----------->
RAV1(1)
----------->
GT1
--------->
bZIP60(2)
--------->
ZAT2
<---------
KAN4(2)
<---------
AtMYB61
------>
NtERF2
----------->
RAV1(2)
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
ALFIN1
<---------
ZAT2
--------->
CCA1(2)
------>
ANAC58
--------->
ANAC58
<-----------
RAV1(2)
<---------
TOE2(3)
------>
ANAC58
--------->
ANAC58
--------->
At5g28300
<---------
ARR11(3)
------
ZmHOX2a(1)
---------->
DOF2
<---------
LBD16
--------->
ARR14(2)
--------->
MYB46(3)
------->
TEIL
aaggaatggtggataccgataactaaagccacctcaatcgcggtgaatcagctggatccaaagatttaggaacatccaacaaacaattcatgaatcgaaa
21505700
Previous
Next
AGI:
At5g53000.1
Description:
TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD). Identical to PP2A regulatory subunit TAP46 (TAP46) [Arabidopsis Thaliana] (GB:Q8LDQ4;GB:Q9LVV2;GB:Q9XHD0); similar to unnamed protein product [Vitis vinifera] (GB:CAO48643.1); contains InterPro domain TAP42-like protein; (InterPro:IPR007304)
Range:
from: 21502681
to: 21505217
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version