Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------->GAMYB        --------->MYB46(3)       -------->P      --------->WOX13(1)    <---------ATHB12 ------->TOE2(3)                                                      --------->DAG2 ------->TOE1(3)                                                     ---------->DOF2 --->AtMYB61                                          --------->DOF5.7(2) ---MYB52(2)                                   ---------->DOF2    ----------->GT1 >AtMYB61--------->TOE2(3)             --------->ARR14(2)<---------TOE2(3) >RAV1(1)--------->YAB1               <---------CCA1(2) <---------DOF5.7(2)   accctaatcaaccaaaattgatgctaattcttcccaaatcaaatctccaaatagccattaacgagaaatggtaaagcacaaaatgaacaaaactcacaat  21379000                                      <---------At4g35610                                      --------->At4g35610                   --------->YAB1     --------->ZAT2               <---------AHL20(2)     <---------ZAT2         --------->ANAC58          --------->SPL7         --------->ANAC46       --------->DEAR3(1)                                                 --         --------->ANAC58      <------NtERF2                                                    -----     <----------DOF2           --------->ATERF1(1)                                       --------->ARR14(2)  <---------ARR11(3)         --------->ARR14(2)                                          <---------ARR14(2)  --------->ARR11(3)     <-----------RAV1(2)     <---------ZAT6          ------>ZmHOX2a(1)   ------>ZmHOX2a(1)   tgaagagcttcaaggaatttatcatgctcaggctccgtccagctctctctagacttagtaatagtataaggcttcctaatcttcttactcaaatcctcct  21379100                            --------->DEAR3(1)                          ------>NtERF2                          <-----------HVH21                                                 <--------                          --------->LBD16                                                   <--------                         --------->ANAC58                                                   ---------                         --------->RAP2.6(2)                                           <---------TOE2(3)                         --------->ANAC46                                            ---------->DOF2                         --------->ANAC58                                       <-------GAMYB                         ------->GAMYB                                          --------->At4g35610                        --------->MYB46(3)                                      <---------At4g35610                      --------->ARR14(2)                                        <------NtERF2<-------                      <---------ARR14(2)                                       ------>NtERF2<------MYB46(1)                  <------NtERF2                                                <---------ERF1--------                 <-----------HVH21                                             <---------MYB46(3)                 ------>NtERF2--------->MYB46(3)                               <---------ATERF1(1)                --------->ANAC46                                              <---------DEAR3(1)                --------->RAP2.6(2)     <---------ANAC46          >>>>>>>>>TBF1<---------RAP2.3(1)                <---------ATERF1(2)  --------->DEAR3(1)        >>>>>>>>>TBF1  <---------RAP2.3(2)                --------->DEAR3(1)  --------->ANAC58    <------MYB83 >>>>>>>>>TBF1<----------DOF2          --------->AtMYB61 <---------ALFIN1            <------MYB46(1)       <---------RAP2.3(3)         --------->MYB46(3) ----------->RAV1(1)         <---------MYB46(3)    <---------RAP2.6(2)   >>>>>>>>>TBF1--------->RAP2.3(3) --------->MYB46(3) <---------DEAR3(1)--------->MYB52(1) --------- ------->LBD16 --------->RAP2.3(1)  --------->ANAC58  <---------MYB52(1)--------->ARR14(2)  <------MYB83 ->ZmHOX2a(1)--------->DEAR3(1)   <---------ALFIN1  <---------MYB46(3)  <---------ARR14(2) --------->MYB59   ccgaagaagaaaccatcgccgtcacatccgccacagccacggccgtagaagaagtcgttggtgaagaagaagaagaaacggcggctgtaaaggaaggtcc  21379200                                   <---------ARR14(2)                                   --------->ARR14(2)                                  --------->RVE1(1)                             --------->ANAC58                             --------->ANAC46                         <------ZmHOX2a(2)     <------ZmHOX2a(1)  --------->ARR14(2)     ============================HOX2a_HOX2a     ===========================HOX2a_HOX2a       <---------HSFC1(1)  <---------LBD16       <---------ARR14(2)        --------->HSFC1(1) -HSFC1(2)            <---------DEAR3(2)          <---------HSFB2a(2)                            <--- -HSFB2a(1)        <-----------HVH21   <-----------HVH21                     <---------ARR11(3)  <--- >HSFB2a(1)        <---------MYB52(1) --------->ANAC46                       --------->ARR11(3) <---- --ARR14(2)    --------->MYB52(1) --------->CCA1(1)        <---------YAB1  ----------->ARR10    <---- ->ARR14(2) --------->YAB1------>ZmHOX2a(2) <---------GLK1(2)     <---------GLK1(2)     ------->TEIL >HSFC1(2)<-----------HVH21  --------->ANAC58     --------->HSFB2a(2)     <------ZmHOX2a(1)<---------   gagaccaggaacagtcataccggtcggatccaagaaatatccgtcagaatttctagagaccatgaatagaatttgaggagatttttgttgaatcttttgc  21379300                                                                                                    -                                                                                                  ---                                                                                             <-------                                                                                          --------->AHL20(2)                                                                                       --------->ARR11(3)                    --------->DAG2                                                     <---------ARR11(3)                   ---------->DOF2                                                    <---------RVE1(1)         <---------MYB52(1)              ---------->DOF2                              *TSS<---------AHL20(2)        <-------GAMYB               <------ZmHOX2a(1)               ---------->DOF2 <------NtERF2 <-- -------DOF2<------MYB83       <---------ANAC46                 <---------YAB1   <------NtERF2------- ------DAG2 <---------ANAC46 <---------ANAC46               <---------ANAC46   --------->ANAC46   --- -----ANAC58<------MYB46(1)<---------ZAT14                  <---------ANAC58   --------->ANAC58<----- -----ANAC58----------->GT1--------->ZAT14                  <---------ANAC58   --------->ANAC58------ -DOF2 <-----------RAV1(1)--------->ALFIN1             <-----------RAV1(1)    --------->RAP2.6(3) <--   ttttttgctctgttgggtttaaaaagctgtgttgtgtaggagagaaagagagaagaaatgtggcttatgagaaagaagaagacggcagagattttattaa  21379400          <---------AHL20(2)      --------->AHL20(1)      <---------AHL20(1)      --------->AHL20(2)      <---------AHL20(2)   --------->YAB1 --------->AHL20(2) <---------YAB1--------->ANAC46 <---------AHL20(2) -------->TOE2(3)                                                                                   < ------>AHL20(2)                                                                         <------NtERF2 --YAB1   --------->AHL20(2)                                                            ----------->GT1 -------AHL20(1)                        <---------ANAC46                                <---------DEAR3(2) -->YAB1 --------->AHL20(2)          <-----------RAV1(1)                               <---------DEAR3(1) ------>AHL20(1)                  <---------ARR14(2)             <---------YAB1       --------->RAP2.6(3) ----AHL20(2)  --------->ANAC58   --------->ARR14(2)  ---------->DOF2              <---------TOE2(3)< --->AHL20(2)  --------->ANAC58<---------ANAC46 --------->HSFB2a(2)        ------>ZmHOX2a(2)      --- -------AHL20(2)             <---------ANAC46   <---------HSFB2a(2)    <---------YAB1 <---------ORA47(1)   aatattaataaatttataagctatagtttttttgtgtatatgttgtgtttctcgatgaaagaaacttattcttgtgatcgtttttgaggtcggcaaaata  21379500                                   ------>ZmHOX2a(2)                                 <---------ARR14(2)                                 <---------ARR11(3)                                 --------->ARR14(2)                           <---------ARR14(2)                        --------->ANAC58                        <---------ANAC55(2)                 <---------ANAC58--------->ARR11(3)                              <---------------AGL15               <-----------GT1  <---------CCA1(2)                                --------------->AGL15            --------->YAB1 --------->ARR14(2)   <---------ARR11(3)        <---------MYB52(1)          ------>MYB46(1)  ------->TEIL         <---------GLK1(2)    --------->ARR14(2)           <--          ------>MYB83  --------->ANAC55(2) --------->YAB1           <-----------GT1  --------->DAG2        <---------MYB59 --------->ANAC58    ---------->DOF2 <---------TOE2(3)   ----------------->AG    ----------->HVH21   --------->O2     --------->YAB1==========================================MADS_MADS ---------ANAC58 <---------ANAC58<---------AGP1 --------->ARR11(3)   <---------ARR14(2)      <------- ---------ANAC58 <---------ANAC55(2)    <---------YAB1 --------------->AGL15    ----------------->AGL3 ------>ARR11(3) <---------bZIP60(2)<----------DOF2 <-----------GT1 <---------CCA1(2)---------->DOF2   gttcttgtgacctaatataacgtgccacgtatttggatctttataataaagatttttccatttatgttttgtatccgtttataccaaaaaagggtctttt  21379600                >>>>>>>>>ARR2                >>>>>>>>>ARR1                >>>>>>>>>ARR2                <---------YAB1                >>>>>>>>>ARR1        <---------TOE2(3)               <------ZmHOX2a(1)     <---------TOE1(3)    <-------GAMYB                  ---------->DOF2   <---------MYB46(3)          <---------TOE1(3)                   <---------ANAC46  --------->MYB52(1) --------DOF2 <---------YAB1   <---------TOE2(3)           <---------AHL20(2)     <---------At4g35610 ---DOF2     <---------TOE2(3) --------->MYB59            --------->AHL20(2)<----------DOF2         -   ctttttggttgaatttaggattgttttgtagtttaggtaaaggttttctaattgtccaaattttatgttttgtggagcctttttagctaatgggcaactt  21379700                                                    <---------YAB1                                                  <---------ICU4                                          <-----------GT1                                      <---------AHL20(2)                                     <---------AHL20(1)                                             - <-----------HVH21             ----------->GT1   --------->ICU4                       --------->bZIP60(1) -------->ANAC46   --------->MYB52(1)--------->AHL20(1)                               <---------bZIP60(1)   gcccgtcaaaaaaaaaaaaactaatgggcaaatgggttatatatttagcccattatgaaacatcgatatgtcaaaaaaaaacttggtgatgccactgttt  21379800                   --------->YAB1                                                               <----                  <---------ATHB12                                                              <----                  --------->MYB46(3)                                 --------->ATHB12  --------->AHL20(2)      --------->ICU4    --------->ANAC58   <---------ANAC58        <---------WOX13(1)  <---------AHL20(2)     <---------TOE2(3)  --------->ANAC58   <---------ANAC58      --------->ATHB12   --------->GLK1(2) --------->ID1  --------->WOX13(1)  <----------DOF2  ------>ZmHOX2a(1)          --------->YAB1  <----   ttgtcttaatgtttagcccaatcaacaagacaacaatgctttttttcttggcatccttcgattagaacgattgatttgtgaatgagaatttaaatggatg  21379900  Previous    Next  AGI:  At5g52660.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT4G01280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49494.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 21376285    to: 21379386    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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