Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------YAB1                               --------->ICU4                             --------->YAB1                                                        --                            <---------YAB1                                                  ---------                            --------->ICU4                       --------->ARR14(2)         ---------                          --------->YAB1                         <---------ARR14(2)         <--------                         --------->ICU4                         <-------GAMYB               <--------   <---------GLK1(1)     <---------YAB1                        <---------MYB46(3)          --------->CCA1(1)   <---------At4g35610 --------->YAB1                         <---------RAP2.6(2)          --------->RVE1(1)   <---------ZAT2     --------->ICU4                          <---------DEAR3(1)    --------->AHL20(2)   --------->ZAT2   --------->YAB1                       <------------CBF           <---------AHL20(2)   --------->At4g35610<---------YAB1             ------->TEIL <---------ANAC46<---------TOE2(3)   ---   ttgggagctcagactgtatcagtgatgatgatgatgatgaagaagagaacgaattttgaaattggcggttttgaatttttaagaaattaaaaaatatccc  21253900                                                                        <---------ANAC55(2)                                                                    <---------ANAC58                                            --------->O2           <---------------AtSPL8                                            <---------O2           <---------------AtSPL3                                          <---------ALFIN1      <------------CBF                                       --------->ANAC58      --------->AHL20(2)                                       --------->ANAC46      <---------AHL20(2)                                       --------->ANAC58 <---------AHL20(2)       <---------RAP2.6(3) ------->LBD16                --------->ANAC46          --------->AHL20(2)      <---------ANAC58 >ARR11(3)                    --------->ANAC58       <----------DOF2<---------ANAC58 <---------AHL20(2) >ARR14(2)                    --------->ANAC58  ---------->ID1<---------YAB1    <---------ANAC46 -ARR11(3)                  ---------->DOF2 --------->TGA1a --------->YAB1<---------MYB52(1) -ARR14(2)                  ==========================bZIP_DOF<---------AHL20(2)<---------ANAC58    - ------>DEAR3(1)           --------->AtMYB61====================bZIP_DOF--------->ANAC55(2)      ----   ccgtcgatttcaagagggagatggagataccaaagcaactctcgccacttgtcgtcttttaattttaattgagtacgttatgccgttttaaatgttcaaa  21254000                                                                  <---------ZAT14                                                     <-----------GT1                                          ----------->GT1         --------->ZAT14              --------->At4g35610      <---------MYB52(1)   --------->ANAC46  <---------ZAT14              <----------DOF2     <---------AHL20(2)  --------->ZAT14           <-----------GT1    <---------YAB1     <---------ZAT18      --------->ATHB12 -------->At4g35610<------------CBF   <---------RAP2.6(3)  ------->GAMYB       <-----------GT1 ------>DOF2  <---------At4g35610   ---------->ID1 --------->AHL20(2)         --------->AHL20(2) <---   acagcacacagttgatagctgaattgattttttcttttgccgttttgttatatttaaacaacacacagtgcatttgccaaataactacatgatgggccaa  21254100                                                                       <-----------RAV1(1)          ------>MYB46(1)                                          <---------ARR11(3)          ------>MYB83                                         ---------->DOF2        --------->DREB2C(2)      <-------TEIL             ----------->GT1       --------->DEAR3(2)       --------->CCA1(2)        ------>ZmHOX2a(2)    --------->WRKY12           <---------ARR11(3)       <------ZmHOX2a(2)    --------->WRKY38(1)        --------->ARR14(2)      <---------ARR11(3)           --------->O2 ----   --------->ALFIN1            <---------ARR14(2)      --------->ARR11(3)           <---------O2 ====  <-------MYC3         --------->YAB1                  <---------ARR14(2)           <---------ANAC46<  ------->MYC3        <---------AHL20(2)               --------->ARR14(2) <---------ANAC46     ------ ------ATHB12     --------->AHL20(2)               ---------->DOF2 --------->ARR11(3)          ------   taaacgtggaccgactaaaactaaataatagaagatacatcgataggcttctctaaagatcggataaaagataatgtcgcatagccacgtagagagcaac  21254200        ----------->HVH21        --------->ALFIN1      <---------ANAC58      <---------O2                         --------->ARR14(2)      <---------TGA1a             <---------ANAC58      --------->TGA1a             --------->ANAC55(2)                             *TSS      <---------bZIP60(2)         <---------ANAC55(2)                             <---------SPL7      --------->O2                <---------ANAC58                               --------->MYB55(2)      <---------ANAC46        --------->TOE2(1)                                  <---------MYB46(3)      <---------ANAC58      ------->TEIL   <---------ARR14(2)                   <---------AtMYB61   ----------->HVH21     --------->ANAC58  --------->GLK1(2)                    <---------------AtSPL3 --->GAMYB         --------->MYB52(1)<-----------HVH21             --------->ANAC58--------->ARR14(2) ===============MYC_MYB  --------->ANAC58 <---------GLK1(2)        --------->ANAC58<---------ARR14(2) ---------ANAC46--------->ANAC58 <---------TOE1(2)               --------->At4g35610   ------>NtERF2 --->ZAT2       --------->ANAC58 --------->SPL7         ---------->DOF2         --------->ALFIN1 --->At4g35610<------ZmHOX2a(1)<---------SPL7  ------>ZmHOX2a(1) <---------At4g35610--------->SPL7   tggctgagacgtggcaggacgaaacggacgcatcgtacgtgtcagaatcctacagaagtaaagagacagaagccagagagaggtggttcggccatatgtc  21254300                         <----------DOF2                   --------->HSFB2a(2)                  ---------->DOF2                   <---------HSFB2a(2)              ---------->DOF2         ---------->DOF2               <---------DAG2                    --------->ANAC58        <<<<<<<ZML2     <---------WOX13(1)               <----------DOF2                   --------->ANAC46  --------->ZAT6      --------->ATHB12            <-----------GT1     <---------YAB1   --------->ANAC58----------->RAV1(1)  <---------YAB1   atcgttctctctataaactttatggaactttgttctgattttctcagagacacgaaaagaaagaaaacaacactagaacaaagagggtttgattgattca  21254400                                                  ------>ZmHOX2a(1)                                             --------->ANAC46                                             --------->ANAC58                                             --------->O2                       --------->YAB1                                             --------->TGA1a                   <---------ATHB12                                             <---------TGA1a                  ------>MYB46(1)                                             --------->ANAC55(2)              ------>MYB83                                             --------->bZIP60(2)             --------->WOX13(1)                                             --------->ANAC58        --------->At4g35610                                        ----------->HVH21          --------->YAB1                   <----------DOF2    --------->At4g35610         --------->At4g35610       ------>MYB46(1)                 --------->ZAT2       <---------At4g35610  --------->ICU4  --------->MYB46(3)  ------                 <---------ZAT2  ----------->HVH21--------->ICU4 --------->ANAC58           ------>MYB83   ---------->DOF2 ====================================bZIP_DOF  --------->ANAC58      <-----------GT1   cttgaaaaagagaaaacacagctttggaaaatggagtcacagttgacacgtccttatggtcatgagcaagcagaagaaccaatcagaattcaccatccag  21254500                                     <----------DOF2                                  <---------ARR11(3)                      --------->GLK1(2)                     <---------ARR14(2)                     --------->ARR14(2)                     <---------GLK1(2)                     <---------ARR11(3)                    --------->HSFC1(2)                    <---------HSFB2a(1)                   ----------->ARR10 <---------DAG2                       <-------TEIL       <---------ARR11(3)--------------->AGL15                  <---------YAB1       --------->ARR11(3)<---------------AGL15             <---------AHL20(2)      <---------CCA1(2)  <---------YAB1                   <---------AHL20(2)     >>>>>>>>>TBF1  --------->AHL20(2)<---------HSFC1(2)               --------->TOE2(3)   --------->CCA1(2)    <------  <---------AHL20(2)--------->HSFB2a(1)           <-----------GT1       --------->ARR14(2)  <-------- --->LBD16  ----------->HVH21     --------->ARR11(3) <---------DAG2     <---------ARR14(2)  ---------   gtatatatatatctatgacagaagattctaatttgagaacttttctcttaatttgccttatttattgtgattcggatacagaagaagaagagcatcatga  21254600    --------->At4g35610    <---------HSFC1(2)                                                            <---------ICU4    --------->HSFC1(2)             --------->DAG2                                --------->ICU4    <---------At4g35610 ----------->GT1                                          <---------YAB1 ---YAB1              ---------->DOF2                          <---------------AGL15 -ICU4        --------->ALFIN1   ---------->DOF2               --------------->AGL15             <--- >YAB1    ---------->DOF2   ---------->DOF2                   <-----------------AGL3        ---------   gaagggagcatccaaagtgttgaagaaagtaaaagaaaaggctaagaaaatcaagaacagtctcactaaacatggaaatggtcatgatcacgatgtggaa  21254700                                              <-----------RAV1(2)                                            ----------->RAV1(1)                                          <---------ZAT18                                          ------>NtERF2                                      --------->ANAC46                                     <---------At5g28300                            <-----------RAV1(2)                                      ----------->GT1     --------->ICU4         <---------HSFB2a(2)                                    --------->At4g35610     <---------YAB1         ============================RAV                        <---------At4g35610   --------->YAB1           --------->HSFB2a(2) ----------->GT1                 <---------ATHB12  <---------YAB1       --------->ANAC58   <---------SPL7                      --------->WOX13(1)  --------->ICU4   --------->ANAC58  <---------LBD16                       <-----------HVH21  <------ ------At4g35610   --------->ANAC58<---------ZAT14                       ------>ZmHOX2a(1)  <-------- >ALFIN1<---------YAB1 --------->ANAC58  --------->DEAR3(1)       ---------->DOF2--------->YAB1   <--   gatgatgatgatgagtatgacgagcaagacccagaagttcacggcgcaccaggttaatttctctgtattaaagtcctcgtcaatcagcagttatattttt  21254800  Previous    Next  AGI:  At5g52300.1    Description:  LTI65/RD29B (RESPONSIVE TO DESSICATION 29B). Identical to Low-temperature-induced 65 kDa protein (LTI65) [Arabidopsis Thaliana] (GB:Q04980;GB:Q06737;GB:Q42275;GB:Q8RXF6;GB:Q9FHC9); similar to COR78 (COLD REGULATED 78) [Arabidopsis thaliana] (TAIR:AT5G52310.1); similar to stress responsive protein [Brassica oleracea var. acephala] (GB:AAR21079.1); contains InterPro domain CAP160 (InterPro:IPR012418) Range:  from: 21254282    to: 21256755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version