Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->WOX13(1)            --------->MYB46(3)          ----------->RAV1(1)       --------->ANAC46    ------>ZmHOX2a(2)                                               ------>MYB83   --------->CCA1(2)                                                ------>MYB46(1)   <------ZmHOX2a(2)                                             --------->MYB46(3)            ------  <---------AGP1                                                --------->ANAC58               ------  --------->AGP1--------->YAB1                                  --------->ANAC58              -------  --------->ARR11(3)                                            --------->ANAC46              <------  <---------ARR11(3)                                          --------->REM1(1)          <------ZmHOX2a(1)  <-----------ARR10                    --------->ANAC46  --------->ARR11(3)          ---------->DOF2 ->TEIL--------->ANAC58                --------->ANAC58  --------->GLK1(2)     --------->ANAC46------ -YAB1 --------->ANAC58                --------->ANAC58  <---------ARR11(3)   --------->YAB1 <-------GAMYB   ataagatctaagcaacaatcagaaatggaaactgagaaaacacaccacaaatttcgaaaaatctacaaccaatctcactataagaaacaaaggaccgttg  21253400                                                       --------->ARR11(3)          --------->At4g35610                          <---------ARR11(3)          <------NtERF2                          --------->YAB1        <---------WRKY38(1)                     ----------->GT1        <---------WRKY12                     <---------ARR14(2)      <-----------HVH21                      --------->ARR14(2) --->WRKY12                                 <------ZmHOX2a(1) ----->HVH21           <---------GLK1(1)  --------->LBD16                 <-----------GT1 -->DOF5.7(2)        <------ZmHOX2a(1)   --------->HSFB2a(2)            <----------DOF2 ---MYB52(1)      <---------LBD16  <-----------GT1    --------->CCA1(1) <---------DAG2 --->WRKY38(1)    <-----------RAV1(2)    <---------HSFB2a(2)      <---------TOE1(2)   acagaaacagtcagcgagactcaggaaattcgaaatttcacctccaggaactgataatatctagatcgaaggaactttacctcgtctgagtaataaactc  21253500                                                         <---------TGA1a                                                         <---------O2                                                         --------->TGA1a                                                         --------->O2                                                         --------->bZIP60(2)                                                         --------->ANAC46                                                         =================bZIP_DOF                                                      --------->MYB46(3)                                                    --------->ARR14(2)                                                    --------->PCF2                                               --------->ALFIN1      <---------HSFC1(2)                                              <-----------HVH21      --------->HSFC1(2)                                          <---------bZIP60(2)    --------->ANAC58                                          <---------ANAC46<-----------HVH21                                       ----------->HVH21 =================bZIP_DOF                                       ----------->TGA1<---------ALFIN1            --------->At4g35610                                    <---------ALFIN1<---------ARR14(2)       ---------->DOF2                                   <---------ZAT14<------NtERF2---------->DOF2     <---------At4g35610                                 <---------ZAT18 <---------HSFB2a(2) <---------HSFB2a(1)           <------NtERF2         --------->ZAT14 --------->HSFB2a(2)--------->ARR14(2)    ----------->ARR10            --------->ZAT18--------->ETT(1) --------->ANAC58  --------->ZAT2   cgagcgaagagtcgtcgatttcaaaaactcgatagtccacactgacgcggtcgggaaccacgtcggaaaggaacttcgacaaagcagcttcaataggcaa  21253600                                                                                  --------->ICU4                                                                             <------NtERF2                                                                            --------->LBD16                                                                            ------>NtERF2                                                                           <---------LBD16     <-----                                                                           <---------ANAC46 <------NtERF2                                                                          <---------LBD16   <--------                                                                          --------->ATERF1(1) -------                                                                          <------NtERF2     ---------                                                                        --------->ALFIN1  <---------ARR14(2)                                                                        <---------DEAR3(1)--------->ARR14(2)          <---------ARR14(2)                                          <---------ANAC58<---------LBD16          --------->ARR14(2)                                         --------->MYB55(2)  <------ZmHOX2a(1)    <---------MYB52(1)             <---------ARR14(2)                <---------MYB46(3) --------->At4g35610 ----------------->AGL1            --------->ARR14(2)    <-------GAMYB<---------ANAC58<-----------RAV1(2)   atttccgatagggatactaacattttcgatcgagccaaatcggagacggtcttcttctccgttgtagacgatgggtgccgggaaattatcaggagccgga  21253700                                                                                            ------>ZmHOX2a(2)                          --------->TOE1(2)                                               --------->ARR14(2)                         --------->ANAC55(2)                                              <---------ARR11(3)                         <---------ANAC58                                                 <---------AGP1                         <---------ANAC58                                                 --------->AGP1                         <---------ANAC55(1)                                              <---------ARR14(2)     <------ZmHOX2a(1)   <---------ANAC55(2)                                           <---------HSFB2a(2)   <---------TOE2(3)    <-------TEIL  <---------ANAC46                                 <---------HSFC1(1) -NtERF2              --------->ARR14(2)                                               --------->HSFB2a(2) -LBD16               <---------ARR14(2)                                     ----------->GT1<-------TEIL -->LBD16  --------->STY1(1)       --------->ALFIN1                          --------->YAB1<------ZmHOX2a(2) >ATERF1(1)<---------STY1(1)    --------->DAG2                 --------->GLK1(1)    <-----------GT1   agattgaggaagcctagggtttcaaatacgtgagaaggtggagtagagaagtaatcgatgttgagaaatcgagttcgcatcgtaattttctagatccgtc  21253800                               <---------YAB1                               --------->ICU4                             --------->YAB1                                                        --                            --------->ICU4                                                  <--------                            <---------YAB1                       --------->ARR14(2)         ---------                          --------->YAB1                         <---------ARR14(2)         ---------                         <---------YAB1                         <-------GAMYB               <--------   --------->At4g35610   --------->ICU4                        <---------MYB46(3)          --------->CCA1(1)   --------->ZAT2      --------->YAB1                         <---------DEAR3(1)           --------->RVE1(1)   <---------ZAT2     --------->ICU4                          <---------ANAC46      <---------AHL20(2)   <---------At4g35610<---------YAB1                     <------------CBF     <---------TOE2(3)   ---   <---------GLK1(1)--------->YAB1               ------->TEIL <---------RAP2.6(2)   --------->AHL20(2)   ttgggagctcagactgtatcagtgatgatgatgatgatgaagaagagaacgaattttgaaattggcggttttgaatttttaagaaattaaaaaatatccc  21253900                                                                        --------->ANAC55(2)                                                                    <---------ANAC58                                            --------->O2           <---------------AtSPL8                                            ====================bZIP_DOF<---------ANAC55(2)                                          <---------ALFIN1         <---------------AtSPL3                                       --------->ANAC58         <------------CBF                                       --------->ANAC58      --------->AHL20(2)                                       --------->ANAC46      <---------AHL20(2) ------->LBD16                --------->ANAC58          --------->AHL20(2)       <---------RAP2.6(3) -ARR14(2)                    --------->ANAC58       <----------DOF2<---------ANAC58 <---------AHL20(2) >ARR11(3)                    --------->ANAC46  ---------->ID1<---------AHL20(2)<---------ANAC46 >ARR14(2)                  ==========================bZIP_DOF<---------YAB1    <---------ANAC58 -ARR11(3)                  ---------->DOF2 --------->TGA1a --------->YAB1      <---------ANAC58    - ------>DEAR3(1)           --------->AtMYB61<---------O2<---------AHL20(2)<---------MYB52(1)     ----   ccgtcgatttcaagagggagatggagataccaaagcaactctcgccacttgtcgtcttttaattttaattgagtacgttatgccgttttaaatgttcaaa  21254000                                                                  --------->ZAT14                                                     <-----------GT1                                          ----------->GT1         <---------ZAT14              --------->At4g35610      <---------MYB52(1)   --------->ANAC46  <---------ZAT14              <----------DOF2     --------->AHL20(2)  --------->ZAT14           <-----------GT1    <---------YAB1     <---------ZAT18      --------->ATHB12 -------->At4g35610<------------CBF   <---------RAP2.6(3)  ------->GAMYB       <-----------GT1 ------>DOF2  <---------At4g35610   ---------->ID1 <---------AHL20(2)         --------->AHL20(2) <---   acagcacacagttgatagctgaattgattttttcttttgccgttttgttatatttaaacaacacacagtgcatttgccaaataactacatgatgggccaa  21254100                                                                       <-----------RAV1(1)          ------>MYB83                                             <---------ARR11(3)          ------>MYB46(1)                                      ---------->DOF2        --------->DREB2C(2)      <-------TEIL             ----------->GT1       --------->DEAR3(2)       --------->CCA1(2)        ------>ZmHOX2a(2)    --------->WRKY38(1)        <---------ARR11(3)       <------ZmHOX2a(2)    --------->WRKY12           <---------ARR14(2)      --------->ARR11(3)           <---------ANAC46<   --------->ALFIN1            --------->ARR14(2)      <---------ARR11(3)           --------->O2 ====  ------->MYC3         --------->YAB1                  --------->ARR14(2)           <---------O2 ----  <-------MYC3        <---------AHL20(2)               <---------ARR14(2) <---------ANAC46     ------ ------ATHB12     --------->AHL20(2)               ---------->DOF2 --------->ARR11(3)          ------   taaacgtggaccgactaaaactaaataatagaagatacatcgataggcttctctaaagatcggataaaagataatgtcgcatagccacgtagagagcaac  21254200        --------->ALFIN1        ----------->HVH21      <---------O2      <---------ANAC58                     --------->GLK1(2)      --------->TGA1a             --------->ANAC55(2)      <---------ANAC58            <---------ANAC55(2)                             <---------SPL7      --------->O2                <---------ANAC58                                *TSS      <---------ANAC46            <---------ANAC58                               <---------MYB46(3)      <---------TGA1a         --------->TOE2(1)                                  --------->MYB55(2)      <---------bZIP60(2)   ------->TEIL   --------->ARR14(2)                   --------->ALFIN1   ----------->HVH21     --------->ANAC58  <---------ARR14(2)                   <---------------AtSPL3 ---------ANAC46   --------->MYB52(1)<-----------HVH21             --------->ANAC58--------->ARR14(2) ===============MYC_MYB  --------->ANAC58 <---------GLK1(2)        --------->ANAC58<---------ARR14(2) --->GAMYB      --------->ANAC58 --------->SPL7                  --------->At4g35610   ------>NtERF2 --->At4g35610  --------->ANAC58 <---------TOE1(2)      ---------->DOF2         <---------AtMYB61 --->ZAT2     <------ZmHOX2a(1)<---------SPL7  ------>ZmHOX2a(1) <---------At4g35610--------->SPL7   tggctgagacgtggcaggacgaaacggacgcatcgtacgtgtcagaatcctacagaagtaaagagacagaagccagagagaggtggttcggccatatgtc  21254300  Previous    Next  AGI:  At5g52290.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO17244.1) Range:  from: 21247579    to: 21253780    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g52300.1    Description:  LTI65/RD29B (RESPONSIVE TO DESSICATION 29B). Identical to Low-temperature-induced 65 kDa protein (LTI65) [Arabidopsis Thaliana] (GB:Q04980;GB:Q06737;GB:Q42275;GB:Q8RXF6;GB:Q9FHC9); similar to COR78 (COLD REGULATED 78) [Arabidopsis thaliana] (TAIR:AT5G52310.1); similar to stress responsive protein [Brassica oleracea var. acephala] (GB:AAR21079.1); contains InterPro domain CAP160 (InterPro:IPR012418) Range:  from: 21254282    to: 21256755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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