Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------------->AGL15                        <---------------AGL15                        <---------DAG2                       ==============================================================================                       ==============================================================================                       ----------------->AGL3                       <-----------------AGL3                       ----------------->AG                       ----------------->AGL1                    <---------WOX13(1)                  <---------ICU4                  --------->ATHB12                                    <----------DOF2                  <--------ATHB1                                     ------>ZmHOX2a(2)                 --------->ICU4                                     <------ZmHOX2a(2)                 <---------YAB1                                    <---------ARR14(2)          --------->ATHB51             <---------DAG2              --------->ARR14(2)         --------->ICU4----------------->AGL2                      --------->ARR11(3)         <---------YAB1<-----------------AGL2  <---------DAG2<-----------RAV1(1)      --------->At4g35610              <----------DOF2  --------->GLK1(2)                    <-------     ----------->RAV1(1)--------->TOE2(3)      <----------DOF2     <---------ARR11(3)        <------- -----TEIL--------->ATHB12          --------->ARR11(3)  <---------ARR11(3)                 <--------- ---TOE1(2)     <---------WOX13(1)  <---------ARR11(3)  --------->ARR11(3)      <-----------GT1    <-   ttcatcgcagcataattgaatgattgccttatttagaagagcttttccactttcccaaaatctatgtgggatctttttgttttgaccttcatttttcttg  20962500                      <---------TOE2(3)                     <-----------GT1                 --------->AHL20(2)                 <---------AHL20(2)                <---------AHL20(1)  <---------------AGL15  --------------->AGL15 <-----------------AGL2 ----------------->AGL3 ----------------->AGL2                                                                       <------ <-----------------AGL3<---------YAB1              --------->YAB1                       <---------TOE1(2) =================MADS_MADS              ---------->DOF2                                <---------TOE2(2) ==================MADS_MADS        --------->CCA1(2)                               <-------TEIL --ANAC58       <---------AHL20(2)  --------->GLK1(1)         <---------AHL20(2) <---------HSFB2a(1) --ANAC58 <---------At4g35610      <---------ARR11(3)   <-----------GT1          --------->HSFB2a(1) --GT1    --------->At4g35610  ---------->DOF2    <------ZmHOX2a(2)              <---------HSFC1(2) ----------GT1  --------->AHL20(2) --------->ARR11(3)<---------YAB1              --------->HSFC1(2)   tttaccatttttagctaaattatttacgattacaaaagatatcaaaagttggatcataatacaatttatagacttactgtagaaaattcgtatgtacaag  20962600                 --------->AHL20(2)                                              ----------->GT1                 <---------AHL20(1)                                             <------ZmHOX2a(1)                 --------->AHL20(1)                                    <---------AHL20(2)              --------->YAB1                                       --------->AHL20(2)             <---------YAB1                                       <---------AHL20(1)           --------->YAB1                   ----------->GT1       --------->AHL20(1)                <     <---------GLK1(2)       --------->GLK1(2)                   --------->AHL20(2)      ---------->DOF2 ---------AtSPL8 <---------AHL20(2)  <---------YAB1     <---------GLK1(2)     <---------TOE2(3)    --   tacaacaaattcttcataataaattttgaaaattctattacaaatgttgtaagaaatagaatttgaaatatatataaactaaggagaaaaaaaaagagaa  20962700                                                                                                -----                                                                                               <-----                                                                                           <---------ATHB12                           --------->TOE2(3)                                            --------->TOE1(2)                         ------>MYB83                                                 --------->CCA1(2)                         ------>MYB46(1)                  ------->GAMYB               <------ZmHOX2a(2)                        ----------->RAV1(1)              <---------MYB52(2)          --------->AGP1                   <---------ZAT18                      ------>MYB83                 <---------ARR11(3)                   --------->WRKY38(1)                  ------>MYB46(1)              --------->ARR11(3) -------TEIL       --------->ZAT18            --------->TOE2(3)                     <---------GLK1(1) ------->AtLEC2   --------->ALFIN1   --------->CCA1(2)--------->AtMYB61             --------->GLK1(1)   catgcattgctctagtcagagtggaccaacatcaacgagataagataacataaaaaccaactcaccataactaaaaacatcccaagagatccaacgattc  20962800                                <-----------GT1                              <---------AHL20(2)                           <----------DOF2                       <------ZmHOX2a(2)                                <-----------GT1      -------- ---->YAB1         --------->SPL7                               <---------DAG2          <----------ID1 --TEIL            <---------TOE1(2)        <---------CCA1(2)   <----------DOF2     <---------AtLEC2   atatcaaacacaaaaacatcgaacgatcagatttaaaccatctctggtatctccaaaacacaaacacttttttttttcttttgtctgaatggaacaaaag  20962900                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                      --------->AHL20(2)                 <---------ZAT2    --------->REM1(1)                               <----------DOF2              <----------DOF2 ----------->HVH21 <---------ARR11(3)              --------->TOE2(3)        <---------MYB52(1) -->DOF2   *TSS <----------DOF2 ------>ZmHOX2a(1)------->TEIL              <----------DOF2  ---------   catgcgacatctctgtgtctttatcttctctctcctcttcttgaaaaactgaacctttaattctttcttcacatctcctttagctttctgaagctgctat  20963000                                      <------NtERF2                                     ------>NtERF2                                     ----------->RAV1(1)                                    --------->DEAR3(1)                                   --------->RAP2.3(1)                                   <------NtERF2                                                  <--                                  <---------ATERF1(1)                                            ----                                  <---------RAP2.3(1)                                            ----                                  ------>NtERF2                                                  ----                                 <---------ANAC46                                                ----                                 <---------DEAR3(1)                                            ------                                 <---------RAP2.3(3)                                          -------                          --------->AHL20(1)                                                 --------                          <---------AHL20(2)                                                 --------              ------>MYB83--------->AHL20(2) <-----------RAV1(1)<<<<<<<<<TBF1                --------              ------>MYB46(1)   --------->RAP2.6(3)          <<<<<<<<<TBF1                 --------->MYB46(3)            --------->AtMYB61  --------->MYB52(1)    --------->REM1(1)                    <---------At4g35610 >At4g35610 <---------MYB59   ----------->HVH21    <----------DOF2   <---------ALFIN1     --------->At4g35610   cttcaagctcaaaaccaaaccctagaaataaaatgacggcgacacaaatgctgcttcatcttcttcttcttccacttctcttccttcacttcagcaacca  20963100                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  --- ---------HVH21                                                                                   <-- ----->ANAC46                                                                                     <-- ----->ANAC58         <<<<<<<<<AtLHY                       <---------HSFB2a(2)                    --- ----->ANAC58  ----------->HVH21                           --------->HSFB2a(2)         <---------ZAT6 ----->bZIP60(2)      <<<<<<<<<AtCCA1               <---------ANAC58                 <---------ANAC58 ->GAMYB       --------->DEAR3(1)       ----------->GT1    <-----------RAV1(2)       <---------ANAC58 -->MYB46(3)   --------->At1g77200     ----------->GT1----------->HVH21              <---------ANAC46 ->ANAC58     --------->DEAR3(2)       <---------MYB46(3)-------->ZAP1         <-------TEIL      <--- >P      <---------GLK1(1)            <---------TOE2(3)<---------WRKY18(1)    <----------DOF2    ---- ->ANAC58--------->GLK1(1) ----------->RAV1(1)      <---------ANAC58        --------->At4g35610 -----   agtcatggcagaaatcaccgacgagttagcgacattgatggaggttaaaacagagcttgacccagaagacaaacacttagcttcatggagtgttaatgga  20963200      ---------->DOF2        <---------YAB1    --------->REM1(2)        ----------->HVH21 ----->ZmHOX2a(2)        <-------GAMYB ------->CCA1(2)         <---------ANAC58 -----ZmHOX2a(2)         <---------ANAC46 -------ARR14(3)         <---------ANAC58 -------AGP1            --------->MYB55(2) ------>AGP1<----------DOF2<---------MYB46(3) ------>ARR14(2)        --------->MYB52(2)                           ---------->DOF2    --------->RVE1(1) -------ARR14(2)        <---------MYB46(3)                    <---------REM1(2)        --------->ARR11(3) -------ARR11(3)        <------MYB83                       <---------------AGL15       <---------ARR11(3) ------>ARR11(3)        <------MYB46(1)<----------ID1   --------->ARR11(3)       ----------->GT1 ------GLK1(1)         <---------AtMYB61<------ZmHOX2a(1) --------->ZAT6     <---------ARR14(2) ----->GLK1(1)        <--------P<---------ANAC46        <---------ARR11(3)<---------ANAC58 ------>ARR10       --------->ALFIN1---------->DOF2    <---------CCA1(2)  <---------ANAC58         --   gatctgtgtaaagactttgaaggtgttggttgtgactggaaaggacgagtttctaacatatctctacaagggaaaggcttatctggtaaaatctctccga  20963300                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                          ----------->GT1    <-------                                                                ------>ZmHOX2a(1)            --------                                                         --------->ARR14(2)                 <--------                     <---------ANAC46  --------->ZAT14   <---------ARR14(2)         --------->ETT(1)        --------->TOE1(3)  <---------MYB46(3)            <---------ARR11(3)    <---------ANAC58 <----    ---------->DOF2 <---------LBD16    <---------ZAT14   --------->ARR11(3)    <---------ANAC58<----- ------->TOE1(2)  ----------->HVH21--------->ZAT6<-----------RAV1(1) --------->ARR11(3)    --------->MYB52(1)   acattggaaagcttaaacatttgacgggtttgttcttgcactacaatgctcttgttggagatattcctagagaacttggtaacttgtcggaacttacgga  20963400  Previous    Next  AGI:  At5g51560.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G45340.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G22730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72186.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49725.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24500.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Range:  from: 20962911    to: 20966080    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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