AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                 <-------MYC3
                                                 ------->PIF5
                                                 <-------PIF5
                                                 ------->MYC2
                                                <---------ANAC55(2)
                                                <---------O2
                                                --------->bZIP60(2)
                                                ================bZIP_DOF
                                                ----------->GT1
                                                --------->O2
                                      <-----------HVH21
                                      <-------MYC3
                                      ------->MYC3----------->HVH21
                                     ===========================bZIP_DOF
                                     <---------ANAC46
                                     <---------ANAC55(2)
                                     --------->ANAC55(2)
                                     ===============================MYC_MYB
                                     =====================bZIP_bZIP
                             <----------DOF2    --------->TGA1a
                             =============================bZIP_DOF
                       <---------At4g35610      <---------ANAC46
                       --------->At4g35610      <---------TGA1a
                       <---------bZIP60(2)      ====================MYC_MYB           --------->ZAT18
                       <---------ZAT2<---------TGA1a                                  --------->ZAT14
                       --------->ZAT2--------->ANAC46                                 <---------ZAT14
                     --------->ZAT14 --------->TGA1a ---------->DOF2               <---------YAB1
                     <---------ZAT14 --------->O2<-------MYC2                    <---------ICU4
               ----------->RAV1(1)   <---------O2------->MYC3                    --------->YAB1
            ------->GAMYB    ==================bZIP_DOF    <--------P           <---------ATHB51 ---
            ===================================MYC_MYB   ----------->GT1        <---------ATHB12<---
            ==============================================MYC_MYB               --------->ICU4<-----
         --------->MYB52(1) <---------ANAC58  <---------ALFIN1                --------->WOX13(1)----
         ----------->RAV1(1)<---------ANAC58----------------->PIF3(1)       ------------>CBF<-------
 
gaatgtagaaaacaacagcaacagtgagctggcttttctcacgtgagagccacgtgaaaagggttgatacaaaaaaaaaaccaattatgagcactgagga  20948900
                           <---------MYB52(1)                                  ------->TEIL
                      --------->ARR14(2)                                       <---------ARR14(2)
                      <---------ARR14(2)                                       --------->ARR14(2)
------>GLK1(2)        <---------ARR11(3)                                      <---------CCA1(2)
------GLK1(1)    ------------>CBF           XXXXXXXXXXXXXXXXXXXX>MIR851-3P<---------ANAC58
-ZmHOX2a(1)     --------->ANAC46        --------->ANAC46                  <---------ANAC46
----->GLK1(1)   --------->ANAC58       <---------LBD16                    <---------ANAC58
--TOE2(3)       --------->ANAC58  --------->GLK1(1)  --------->AtMYB61<------------CBF
 
attctgtcgaaccccttgtaagcaatatccgtttgggattttcacggagtagcaaaccaaaacaaatcccaaaaattgtgtgaatcttcgattttgggtt  20949000
                                                                                                  --
                                                                                              ------
                            <---------ZAT6                                                   <------ZmHOX2a(2)
                          <------MYB83                                                       -------
                      <-----------RAV1(1)                                                    <------
                 ------>ZmHOX2a(2)                                                          <-------
                <------ZmHOX2a(2)                                                           --------
               --------->ARR14(2)                 --------->ICU4                            <-------
               <---------ARR11(3)          <---------LBD16                                  --------
               --------->ARR11(3)         <---------ANAC46                                  <-------
               <---------ARR14(2)         <---------ANAC58                             <-----------HVH21
 <-----------------AGL3   <------MYB46(1)<-------TEIL                     --------->TOE2(3)<--------
 ----------------->AGL2  <---------AtMYB61<---------ANAC58                --------->YAB1  <---------DEAR3(2)
 ----------------->AGL3 <--------P --------->ANAC46--------->ATHB12   --------->MYB46(3) <---------TOE1(2)
 
aagacccaaatgtagaacgatcttcatgttggtgttacacaaaattcgtggaaatgtttggacttgaaaatcaacaatctcaatcttcttcgtcggatct  20949100
 <---------ICU4
------->YAB1                                                                       <---------MYB46(3)
>ZmHOX2a(2)                                                                        --------->MYB52(2)
-->GLK1(1)                                                                       <---------MYB52(1)
---GLK1(1)                                                                     <---------ANAC58
--AGP1                                                                         <---------ANAC46   --
->ARR14(2)                                                             --------->ANAC58          ---
--ARR11(3)             ---------->DOF2                                 --------->ANAC46     <-------
->ARR11(3)         <---------ZAT6                         --------->ARR11(3)   <---------ANAC58 ----
--ARR14(2)       <---------At5g28300              <---------YAB1       --------->ANAC58     --------
-CCA1(2)        <-----------GT1                 <---------ZAT6         ------->GAMYB    <---------YAB1
 
ctaataagtgttttgagttttactgttaaagaagacacattagctattctactgttattaagttctcgtttcaaacgccatgccgtttgttatatttaaa  20949200
   --------->At4g35610                                                    --------->LBD16
   <---------At4g35610                                                   --------->RAP2.6(2)
   <------NtERF2                                                         --------->ANAC46
  <---------ATERF1(1)                                                 --------->ANAC58
 <---------DEAR3(1)                                                   --------->ANAC46
------->ANAC46                                                        --------->ANAC58
------>RAP2.6(3)                                                <-----------HVH21
--AHL20(2)                                                   --------->At4g35610
----->MYB52(1)                                          *TSS <---------At4g35610
->AHL20(2)                                 <---------TOE2(3) ------>ZmHOX2a(1)      --------->At4g35610
 
aacggcagcgcatcgctctatcccctactaaaccctgagcatttttaagttaaactcagaggtcctctgtcacaagccgcaagaagaagcagagcaatgt  20949300
                                                                                   <------NtERF2
                                                                                  --------->MYB52(1)
                    --------->RAP2.6(2)                                           ------>NtERF2
               --------->ZAT14                                                   <---------ALFIN1
               <---------ZAT14                                                   --------->DEAR3(1)
           ------>NtERF2                                                        ----------->HVH21
           <---------ATERF1(1)                                                  <---------ABI4(2)
          --------->DEAR3(1)                                                    --------->ATERF1(1)
         --------->RAP2.3(1)                                          --------->At4g35610
         <------NtERF2                                                <---------At4g35610
         --------->ATERF1(1)                                          <---------ZAT2
         ------>NtERF2  <---------CCA1(2)                             --------->ZAT2
        <---------ATERF1(1)                                          --------->ARR14(2)
       <---------DEAR3(1)                                            <---------ARR14(2)
      <---------LBD16--------->LBD16                                <------ZmHOX2a(1)
     --------->O2 <---------At4g35610                     <---------HSFB2a(2)  <---------ATERF1(1)
     ===============================================MYC_MYB      ----------------------->TaNAC69(2)
     <---------O2 ------>NtERF2                           --------->ANAC46     ------>NtERF2
     <---------bZIP60(2)--------->GLK1(1)                 --------->ANAC55(2) --------->ANAC58
     <---------TGA1a----------->RAV1(1)              --------->HSFC1(2)       --------->bZIP60(1)
  ----------->HVH21 --------->RAP2.3(2)              <---------HSFB2a(1)      --------->bZIP60(2)
  ----------->TGA1--------->At4g35610                <---------HSFC1(2)       <---------bZIP60(1)
<---------ZAT2 --------->At4g35610         <--------P--------->HSFB2a(1)      --------->ANAC46
--------->ZAT2 <---------At4g35610        <-------GAMYB   --------->HSFB2a(2) --------->ANAC58  <---
--------->At4g35610--------->ATERF1(1)   <---------MYB46(3)--------->LBD16   --------->ATERF1(1)<---
<---------At4g35610--------->RAP2.3(1) <---------MYB52(1)<---------LBD16    <---------ATERF1(1) <---
 
ggaagctgacgcggcgactgcagccgcatatcaattcgacccgatggttagtccgaaatttccggaatggaggagctggagacgccaccggtctctatgg  20949400
                                            --------->bZIP60(1)
                                          --------->At4g35610
                                          <---------At4g35610
                                        <---------ANAC46
                                   --------->MYB52(2)
                                   <---------MYB46(3)
     --------->At4g35610         --------->ARR14(1)
  <------ZmHOX2a(2)             <---------GLK1(2)                <---------YAB1
------ANAC46      ---------->DOF2--------->GLK1(2)              --------->AHL20(2)
------ANAC58      --------->MYB52(1)   <---------At4g35610 <---------YAB1                     ------
------ANAC58   --------->At4g35610<-------TEIL      ---------->DOF2                     <----------DOF2
 
cttcgatcatctaaaaacagctaaagggtttcagagattcgttgctgatgccattgaaaggtatgatttttatagaattagtctatgtgtgctttgtcaa  20949500
                              <---------YAB1
                    <------MYB46(1)
                    <---------MYB46(3)
                    <------MYB83
                   --------->MYB111(1)
                   <---------MYB46(3)                                                             <-
                   <---------AtMYB61                                                              --
                   --------->MYB111(2)                          ----------->GT1                  <--
                   --------->MYB46(2)                        <---------bZIP60(2)               <----
                   --------->MYB59                           <---------ANAC46                -------
                   --------->MYB55(2)                     <---------YAB1                    <-------
                  <--------P----------->GT1             --------->YAB1                    <---------ANAC46
                  <---------MYB55(1)--------->At4g35610 <---------ICU4                  <---------ZAT14
       <---------TOE2(3) <---------AGP1                --------->ICU4                   --------->ZAT14
---->DOF2 <XXXXXXXXXXXXXXXXXXXXMIR3440B-5P       <---------AtLEC2              <---------ZAT6<------
 
agtagccattgaagttgatgggttggtagaactgttattagcttagtcattttcatgaattatgatgtggtttttagacttagtgctactgtgttgtgta  20949600
     <---------TGA2(1)
     ----------->GT1
     --------->bZIP60(1)                                               <-------TEIL
     <---------bZIP60(1)                                            --------->At4g35610
<---------ANAC46                                               <------MYB83
--------ZAT14                                                  <------MYB46(1)
------->ZAT14                                                 <---------MYB46(3)
-------ZAT6        <---------WOX13(1)                       <-------GAMYB
-----ANAC46  <------MYB83                                  --------->MYB52(2)
-->ZAT14     ----------->GT1                           <---------At4g35610      <------ZmHOX2a(1)
--ANAC46     <------MYB46(1)  --------->ARR11(3)       --------->At4g35610   <---------LBD16
---ZAT14    --------->MYB59 --------->ICU4       <---------TOE1(2)  <---------At4g35610         ----
 
gtgttgtgatgtaatttggttaattgaagaaatgattttggaaccattttcttaggtctggtgagttggtgagctacatatcaggaatgccttcgtctcc  20949700
                                                       <<<<<<<<<MYB98
                                                <----------DOF2
      ---------->DOF2                 <---------ARR11(3)
    <---------YAB1                    --------->ARR11(3)        --------->ZAT6      <-----------GT1
 <---------YAB1                  --------->At5g28300<---------TOE2(3)               <---------YAB1<-
 --------->ICU4       --------->GLK1(1) <---------ANAC58  <---------YAB1  <---------ZAT18         <-
----->LBD16           <---------GLK1(1) <---------ANAC58<-----------GT1  <---------ZAT6   <---------ARR11(3)
 
agagattattaaagccatggatgagatttcagacactgtaagttcttgctgcatttatgttactataactctattagtgttcttgttatactagctctta  20949800
<- Previous    Next ->

AGI:  At5g51540.1   
Description:  metalloendopeptidase. similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT1G67690.1); similar to hypothetical protein OsJ_021551 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38068.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ66412.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14527.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567)
Range:  from: 20949257    to: 20953639    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version