Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          --------->YAB1            <---------AHL20(1)                                         --------->YAB1               -            <---------AHL20(2)                                       <---------AHL20(2)             -            --------->AHL20(1)                                       <---------AHL20(1)             <            --------->AHL20(2)                                       --------->AHL20(1)             <         --------->YAB1                                              --------->AHL20(2)         ----- --------->HSFB2a(2)                                          --------->DAG2                    <---- <---------HSFB2a(2)                                         ---------->DOF2 --------->DAG2   ------- --------DOF2                                             --------->AHL20(2)---------->DOF2  <------- --->ARR11(3)                   <---------TOE2(3)       --------->YAB1<---------YAB1        --------- ----ARR11(3)    --------->AHL20(1)        <---------------AGL15    --------->YAB1       --------->YAB1 >DOF2 --------->AHL20(2)     ---------->DOF2     ----------->GT1  <---------YAB1  <---------YAB1----   ctttcagaaaataataaaatatgttatacgaataaaggttttttgattttttaagtaaaaataaaaagtattataataaaaagttatgaaatcatataat  20770200                             --------->GLK1(2)                             <-----------ARR10                  --------->ARR11(3)                                                                <                 --------->GLK1(1)                                                               <<<<                 <---------HSFB2a(1)                                                          <<<<<<<                 --------->KAN4(1)                                                         <<<<<<<<<TBF1     <---------AHL20(2)     <---------GLK1(2)                                           <<<<<<<<<TBF1     --------->AHL20(2)  --------->YAB1                                              <<<<<<<<<TBF1<xx -------->AHL20(2)--------->KAN4(2)                                               <<<<<<<<<TBF1<xxxxx -------->AHL20(1)<---------ARR11(3)                                           <<<<<<<<<TBF1<xxxxxxxx ---------AHL20(1)--------->ARR14(2)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------AHL20(2)<---------ARR14(2)                                        <<<<<<<<<TBF1<xxxxxxxxxxx ---->ICU4       --------->HSFB2a(1)        --------->ATHB12             <<<<<<<<<TBF1<xxxxxxxxxxxxxx -----YAB1       <---------KAN4(1)        ----------->RAV1(1)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->YAB1         <---------GLK1(1)       --------->ANAC46             <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxx --AHL20(2)      <----------TaMYB80     --------->LBD16             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) >AHL20(2)      <---------KAN4(2)      --------->ANAC46            <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxx ----->YAB1     ---------->TaMYB80    <---------LBD16        <------NtERF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aataaatttaaatggaagaatatcccatgagaatctcaactccgcaccattggagagattggccccttcttcttcttcttcttcttcttcttcttcttct  20770300      <<<<<<<<<TBF1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <<<<<<<<<TBF1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                           ------------>CBF <<<<<<<<TBF1  <<<<<<<<<TBF1                                                <----------DOF2 <<<<<TBF1  <<<<<<<<<TBF1                                               <----------DOF2 <<TBF1  <<<<<<<<<TBF1     ----------->RAV1(2)                          ------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   ------>ZmHOX2a(2) xxxxxxxxxxxxxxxxxxsmallRNA(se3)            <-----------GT1          <------ZmHOX2a(2) xxxxxxxxxxxxxxxsmallRNA(se3)         ------------>CBF              --------->AGP1 xxxxxxxxxxxxsmallRNA(se3) --------->At4g35610                      <---------ARR14(2) xxxxxxxxxsmallRNA(se3)    <---------At4g35610------------>CBF      <---------ARR11(3) xxxxxxsmallRNA(se3) <<<<<<<<<TBF1  --------->At4g35610             --------->ARR14(2) xxxsmallRNA(se3) <<<<<<<<<TBF1     <---------At4g35610             --------->ARR11(3)   tcttcttcttcttcttcttcttcttcttcacctgcatcagcacaatttcccaatctcttcttcaaatttagatcctttctttcttcaatctctgtattcg  20770400                                                                                              ------>ZmHOX2a(2)                                                                                              =======                                                                                             <------ZmHOX2a(2)                                                                                             ========                                                                                             --------                                                                                            ---------                                                    <<<<<<<<<<AtSR1                  <------------CBF                                                   <---------ANAC58         <---------HSFB2a(2)                                                   <---------ANAC55(2)      --------->HSFB2a(2)                                                   <---------ANAC58        <---------LBD16  <--------                                                   <---------ANAC46      --------->ARR14(2) ---------                                                   --------->ANAC55(2)   <---------ARR14(2) <--------                                                   <---------ANAC55(1)  <---------MYB52(1)  ---------                                                <---------MYB52(1)   <-----------------AGL1 <--------                                               <-----------HVH21     ----------------->AGL1<---------CCA1(2)              --------->ZAT14        --------->GLK1(2)     --------->AHL20(2)       --------->ATHB12         <----------DOF2            <---------GLK1(2)      <---------AHL20(2)--------->LBD16<--------    <-------TEIL        --------->MYB52(1)    --------->ANAC46    ----------->HVH21<-------TEIL   attagattcatctttcttcactcgaataacgggtttgagattctctctacgttacgcgtttttaaatggtgaccgtttctggagattcattgcagatctg  20770500     <------ZmHOX2a(1) ===========HOX2a_HOX2a                                                                            -- ===========HOX2a_HOX2a                                                                          ---- ->CCA1(2)                                                                --------->ETT(2)       ---- >ARR14(2)                                                                <---------ETT(2)     ------ -ARR14(2)                             <---------YAB1                    --------->DDF1 <---------MYB46(3) >ARR11(3)                  --------->GLK1(2)                     --------->YAB1        <------MYB46(1) -AGP1                     <---------GLK1(2)                      <---------ICU4        <------MYB83 >AGP1      --------->ICU4 --------->ARR14(2)<---------YAB1<---------MYB46(3)         <--------P----- -ARR11(3)--------->bZIP60(1)       --------->GLK1(2)   <-----------RAV1(1)   ------>NtERF2    ------ ---ARR10 <---------bZIP60(1)      <---------GLK1(2)------>ZmHOX2a(1)<---------ICU4 <-----------RAV1(1)   aataagaggatgacatgatcacaaacccagaatctcaaattctgatttttattcctatttgttgttgatcatcatgtcgacgactcatgttggtttacca  20770600          --------->TOE1(2)         <---------At4g35610         --------->At4g35610         <---------HSFC1(2)         <---------HSFB2a(1)         <---------ZAT2        --------->ANAC58        --------->ANAC58                                   --------->ARR14(2) ----->GAMYB                                             ----------->HVH21 -->MYB46(1)                                            --------->ANAC46                         <--- -->MYB83--------->HSFC1(2)                 --------->LBD16<---------ARR14(2)                 <------ --->TOE1(2)                              <---------LBD16--------->LBD16                      ------- ---->MYB52(1)                   <-----------RAV1(1)   <---------LBD16                 <---------At4g35610 --->TOE2(2)         <------NtERF2      -------->P  <---------GLK1(1)                  --------->At4g35610   acgaaaatggaagctacgaagtcgtcgaaacaaaattgttgcaacccggttaagaaacccggacccgtttcaattgatcatgttctcttagctctccgtg  20770700                            <------ZmHOX2a(1)                      <---------ANAC46                         --------->YAB1                        <-------GAMYB                         <-----------RAV1(2)                  <------MYB46(1)                       --------->GLK1(2)                      <---------MYB46(3) -------ARF1      <-----------GT1                             --------->MYB52(2)                  <-- -----HVH21     --------->CCA1(2)                         <-----------RAV1(1)                     <-- -->LBD16      <---------ARR11(3)           <----------DOF2   <------MYB83                        <--   agacaagagaagagcgagatttacgaatcaggagcttattcagtttctttgattctgagaatgttggttacttagattgtgctcaaattgagaaggggtt  20770800                              --------->ANAC46                    <------MYB83                                                                    -                    ----------->GT1                                                              <---     =====================bZIP_DOF                                                     <---------YAB1     <----------DOF2<------MYB46(1)                                        --------->ALFIN1      <--- --------->ZAT18  --------->ALFIN1                                       <---------ANAC58     <------ <---------ZAT18--------->O2  --------->ANAC58                           <---------ANAC58     <------ -------ANAC58  --------->TGA1a                <---------TOE1(3)         <---------ANAC46     <------ -------ANAC46  <---------O2  --------->ANAC58 <---------TOE2(3)     --------->ALFIN1--------->YAB1<- -------ANAC58  <---------TGA1a      <------ZmHOX2a(1)             --------->CCA1(2)<---------YAB1 --   atgtgcgcttcaaatcccaagtgggtataaatacgctaaggagttgtttagggtttgtgatgcgaatagagatgggcgtgtggattatcatgagtttcgt  20770900         --------->YAB1 -------->CCA1(2) ------TOE2(2)                           --------->ANAC58 ------TOE1(2)                   --------->GLK1(2) ---ANAC58             <---------At4g35610 ---ANAC46             --------->At4g35610                     <---------MYB46(3)    <----------DOF2 ---ANAC58     <------ZmHOX2a(1)<---------GLK1(2)<---------TOE2(3)         <---------LBD16 --------->ARR14(2) --------ARR11(3) <---------ANAC58       --------->ANAC58     <---------YAB1 ------>ZmHOX2a(1)      - ------->ARR11(3) <---------ANAC58       --------->ANAC46--------->YAB1    ----------->RAV1(2)<------   agatatatggatgataaggagcttgagctgtatagaatctttcaagctattgatgttgagcataatggttgtatttctcctgagggactttgggattcac  20771000                                                                                 <------ZmHOX2a(2)                                                                                 ====================                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)  ---------->DOF2                                                <------ZmHOX2a(2)     <---------YAB1  <---------DOF5.7(2)                                           <---------ARR11(3)   --------->YAB1 -------->DOF5.7(2)               <---------At4g35610          <---------At4g35610  <---------YAB1 -----GT1        <-------TEIL <----------CDC5--------->WRKY18(1)--------->ARR11(3)<---------ICU4   tcgttaaagctggtatagtttcatttacatgctctgagcttattttggtcaagaatcaaacttgcagatcatattgttgttagatcattataagtctata  20771100  Previous    Next  AGI:  At5g51050.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G61810.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83157.1); similar to unknown [Picea sitchensis] (GB:ABK25206.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68405.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR0020 Range:  from: 20770607    to: 20772940    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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