Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->LBD16                                       <---------LBD16                                     <---------ALFIN1             <-----------HVH21                                    <---------WRKY12             --------->ANAC46      --------->TOE1(2)                                    --------->ETT(2)     --------->ARR14(2)        --------->ATERF1(1)                                    <-------TEIL         <---------ARR14(2)       ------>NtERF2                                 --------->At4g35610     <---------ARR11(3)       <---------ATERF1(1)                    ---------->DOF2--------->TCP16(2)    <-----------ARR10       --------->LBD16       --------------->AtSPL8   --------->MYB59          --------->ARR11(3)     <---------ANAC58 -------ZAT6     --------->ANAC46<---------At4g35610    <---------CCA1(2)       <---------ANAC58 -ARR14(2)    <---------ZAT14  <-----------RAV1(2)  --------->ANAC58           <---------LBD16 >ARR14(2)    --------->ZAT14<-----------HVH21      --------->ANAC58   <---------TOE1(2)   gtgtaagactgagtactatactcaaagtcagagtcaggtccaccgggacaataaacgcatatattccccgtcgtagctatatgcgggcacctatgaggct  20501700                                                           <---------HSFB2a(2)                     <------ZmHOX2a(2)                     --------->HSFB2a(2)                    --------->ARR14(2)                    <---------LBD16                   --------->GLK1(1)                     <---------LBD16                ------->GAMYB                         --------->At4g35610             --------->MYB52(1)                       --------->ZAT2          <---------ALFIN1                            --------->HSFC1(2)          ----------->RAV1(1)                         <---------HSFB2a(1)          =========================RAV                --------->HSFB2a(1)       --------->DEAR3(1)                             <---------HSFC1(2)       ------->GAMYB<---------ARR14(2)                <---------ZAT2       --------->RAP2.6(2)                            <---------At4g35610       --------->ANAC46                           --------->ANAC58                                  -      <------------AtMYB77            <-----------------AGL1--------->LBD16                         <      --------->MYB46(3)     <---------At4g35610  --------->ANAC58                                 <-    <---------ARR14(2)    ---------->DOF2         --------->ANAC46                               ----    --------->ARR14(2)   ----------->HVH21       <---------LBD16                            ---------    --------->MYB52(1) ----------->RAV1(2) --------->ARR14(2)    ----------->ARR10     <------ZmHOX2a(1)   tcgacataaccgccacaacggcgatccctgaagctgttcgaaccggtttggcacggagcttcgggagaagagtctctctctctgaatcaggaagcgcagc  20501800                                                   <---------MYB46(3)                                                  <---------ANAC46                                 <---------RAP2.6(3)<-------GAMYB                       ------->PIF4               <---------DEAR3(1)                       <-------PIF4              <------NtERF2                       ------->MYC2             <---------RAP2.3(1)                       <-------MYC3             <---------DEAR4(2)                       ------->MYC4            <---------DEAR3(1)                       ------->PIF5      --------->LBD16                       <-------PIF5     <---------ETT(1)                       ------->MYC3 --------->GLK1(1)                       <-------MYC2--------->ARR14(2)                       <-------MYC4<---------ARR14(2)                  <---------WRKY38(1)           --------->ZAT2       --------->RAP2.6(2)<---------DEAR3(2)  <---------WRKY12         ------->PIF5 <---------TGA1a   <---------LBD16        <----------DOF2  --------->At4g35610 ======================================MYC_MYB--------->MYB59                 -- -------->YAB1        --------->TGA1a  <---------LBD16        <---------ANAC46          --------->ALFIN1 ---------ICU4        ================================bZIP_DOF<---------ANAC58          <---------ANAC46 --------ATHB12     <------------OsbHLH66------>NtERF2  <---------AHL20(2)            <---------ANAC46 ----->WOX13(1)     <---------ALFIN1<---------GLK1(1)   <---------YAB1--------->WRKY18(1) ----------- >ZAT18  <-------PIF5------------>OsbHLH66 ---------->DOF2    <---------ANAC58       <---------ANAC46   aatcatctccacgagcttaggcgcacgtgctaggccgtatttccggcaagcggcggttttaattgcgtttaggtcaacattctcgttgcggtgtgaacgc  20501900                                                                           <------NtERF2                                                                          ------>NtERF2                                                                          <---------RAP2.6(3)                                                                         --------->RAP2.6(2)                                                                         --------->DEAR3(1)     <----                                                                         --------->RAP2.3(2)    <----                              <------NtERF2                         ---------->DOF2            <-----                             ------>NtERF2                        ----------->HVH21     <------NtERF2  --------->YAB1            <---------ANAC46                 --------->DEAR3(1)        <---------TOE1(1)  <---------ICU4            <---------ANAC58                --------->ANAC46     ----------->RAV1(2) <---------ATHB12     --------->ARR14(2)                    --------->ANAC58 <----------DOF2   <----- ------->WOX13(1)     <---------ARR14(2)            <---------MYB52(1)  --------->RAP2.3(1)    <----- >HVH21 <---------At4g35610 <---------ANAC58 <<<<<<<<<TBF1  --------->ANAC58<---------DAG2  <--------P   tcaatcatggtgctaacaatctccgatatggcgcgaactcgagcttcttcttcagttaatccacggccctgatagccgcctttacctggccgaggttgct  20502000                                   <-----------TGA1                            <---------ETT(2)                            --------->DEAR3(1)                           <------NtERF2                           --------->ATERF1(1)                          ------>NtERF2                          <---------ATERF1(1)                          <-----------HVH21                         --------->RAP2.3(2)                         --------->DEAR3(1)                         --------->O2                         <---------O2                        --------->ERF1                        --------->RAP2.3(1)                   --------->LBD16             <---------GLK1(2)   --------->At4g35610 ------>NtERF2                         <---------ANAC55(2)          <---------ARR11(3)   --------->ZAT2     ------->GAMYB<-----------HVH21         <---------LBD16              <---------ARR14(2)   <---------At4g35610--------->DEAR3(1)                     --------->ANAC55(2)          --------->ARR11(3)   <---------ZAT2    --------->MYB46(3)                     <---------LBD16 *TSS          --------->ARR14(2) ------DOF2          --------->DEAR3(2) --------->AtMYB61  --------->MYB52(1)    --------->WRKY38(1) -----DAG2      --------->ZAT6 --------->DEAR3(1)       <---------ICU4   <---------ZAT18<---------TOE2(2) ----ANAC46     <---------ICU4<------NtERF2   --------->TOE1(3)          --------->ZAT18----------->ARR10 ----ANAC58 <-------TEIL--------->RRTF1(1)    --------->TOE2(3)     XXXXXXXXXXXXXXXXXXXX>MIR417 <---- ----ANAC58<---------MYB52(1)------>NtERF2 --------->ARR14(2)<---------ANAC46    --------->WRKY12   ttttcagctcgccgttcatcactaccgccgtcgccatcgtcaccaaaacctcagaccaaaattacgggaaaatagcgaactcgttgaacgcagattttgt  20502100                --------->ANAC46                                 <---------AHL20(2)              <-----------GT1                                   --------->AHL20(2)          <----------DOF2                                       <---------AHL20(1)         --------->TOE2(3)                          <---------WRKY38(1)              ---------->DOF2<     --------->GLK1(1)                              <---------WRKY45            --------->At4g35610 <     <---------GLK1(1)                  <----------DOF2         <---------AHL20(2)------->GAMYB     < <---------TOE2(3)                      <---------DAG2     ------------>CBF    ----------->RAV1(1)  - -----ZAT6------>ZmHOX2a(1)          <-----------GT1<---------WRKY12       <---------TOE2(3) --------   gttaatgaaatcctttaaacgacatcgttttaatctgtttaacttttttttttgtcaacgcttcaatttttttttttgaggcaacagaaaagacataaaa  20502200                                                         <----------DOF2           --------->YAB1                                                        <---------DAG2            <---------ZAT6            --------->GLK1(2)                         ------>MYB83              ----------->GT1            <---------ARR11(3)                        ------>MYB46(1)         --------->ZAT14  --------->ALFIN1        <-------TEIL              <---------ALFIN1          --------->ZAT18 ---------ANAC58         --------->GLK1(2)         --------->At4g35610     <---------ANAC46 ---------ANAC58        --------->ARR14(2)--------->At4g35610            --------->YAB1 ---------ANAC46        <---------ARR14(2)<---------At4g35610           <---------ATHB12 -------->ALFIN1      <---------YAB1     --------->GLK1(2)    <---------ZAT6  <---------ZAT14 ->AHL20(2) --------->ARR11(3)     ------>ZmHOX2a(1)--------->MYB46(3)  --------->ICU4             <-   tggtgtggaaccaaaatctatatgaagattcagtctccttaagaagctgaagcaccagccttttgtgttagacaatgatgtgcagtgataacttgggttt  20502300                                                           ---------->DOF2                                                       --------->ANAC58                                                       --------->ANAC58                                                      <------NtERF2             <---------MYB46(3)                                                     <---------RAP2.6(3)        <-----------RAV1(1)                                                     ------>NtERF2            <---------At4g35610          <----------DOF2              <---------ANAC46--------->ANAC46 <---------ANAC46        <---------YAB1         --------->YAB1       --------->DEAR3(1)  <---------ANAC58          --- --------TOE2(3)             ------->TEIL          --------->DEAR3(2)   <---------ANAC58        <----   tgaggcagtcatctttgagaatgactccatgaatcgtaatggcatatatatgtgccgacgtaatagccaagatggcttatagctgttggagataatagtc  20502400                                                                                       <---------AHL20(2)                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                       <---------ARR14(2)                                                                  <-----------GT1     <---------AHL20(2)                                                       <---------AHL20(2)             --------->AHL20(2)                                                      <---------AHL20(2)           <---------ICU4                   <---------------AtSPL3             --------->AHL20(2)--------->HSFB2a(1)                   <---------------AtSPL8   <----------DOF2     <---------WOX13(1)<---------YAB1 --->ZmHOX2a(1)    <------ZmHOX2a(1)    <---------CCA1(2)     --------->ATHB12    --------->ICU4 -----ZAT18<---------ANAC46             ------>ZmHOX2a(1)--------->ARR11(3)     --------->YAB1    ---   ctctccaactattgtggagaaggagtaccaaaacatataatcctatcttttgggaattaaatcttgatttacaaatcttccatcataattttatatcagc  20502500                                                                                   <---------At4g35610                                                                                  ------>ZmHOX2a(1)                                                                              <---------GLK1(2)                                                                              <---------ARR11(3)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)                                                                              --------->AGP1                                                                             <---------At4g35610                                      <---------GLK1(2)                     ----------->ARR10                                --------->WOX13(1)           --------->AHL20(2) ------>ZmHOX2a(2)           <---------ZAT6     <---------YAB1                 <---------AHL20(2)<------ZmHOX2a(2) --------->AHL20(2)           <---------ATHB12     ---------->DOF2    --------->DAG2 ------>WOX13(1)            ------>ZmHOX2a(1)  ---------->DOF2       ---------->DOF2   caattacattcaagtgttatccaacttctcctatcattcaaattctcacaaaagaaagaacaataaatgaaaaaagctcagatcctgctcatgggagagt  20502600  Previous    Next  AGI:  At5g50320.1    Description:  ELO3/HAC8/HAG3 (ELONGATA 3); N-acetyltransferase/ catalytic/ iron-sulfur cluster binding. Identical to Elongator complex protein 3 (HAG3) [Arabidopsis Thaliana] (GB:Q93ZR1;GB:Q9FK40); similar to RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Physcomitrella patens subsp. patens] (GB:EDQ60161.1); similar to histone acetyltransferase HAT2 [Triticum aestivum] (GB:ABG43095.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17201.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Histone acetyltransferase ELP3 (InterPro:IPR005910); contains InterPro domai Range:  from: 20497852    to: 20502076    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g50330.1    Description:  ATP binding / protein kinase. similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT4G24810.2); similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT4G24810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17208.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 20502449    to: 20505910    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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