Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->YAB1                                                    --------->ARR11(3)               --------->MYB46(3)                   <---------ARR11(3)             <---------PCF5                        --------->YAB1                           <--------         --------->GLK1(2)                        <---------TOE1(3)                        <---------LBD16        <---------GLK1(2)                         <---------YAB1                           <---------      --------->ANAC58                            <---------TOE2(3)               --------->HSFB2a(2)      --------->ANAC58                         --------->AHL20(2)                 <---------HSFB2a(2) ----------->HVH21                       ------>ZmHOX2a(1)    ----------->GT1  <----------DOF2   gcgatgacaagaatcggaccactgaaaattaagaacatgcttcctacaatttaagataatcagagagtgaaattagcaatgcttttggaaaatttcggag  20225600                                                                                                  ---                                                                                              <------                                                                                            <--------                                                                                            ---------                                                                                           <------ZmHOX2a(1)                                                                                         --------->LBD16                                     --------->ALFIN1                                   <---------LBD16    --------->ANAC58         ---------->DOF2                         <---------ARR14(2) <-----------RAV1(2)    --------->ANAC58      ------>NtERF2                              --------->ARR14(2)============== -ANAC46             <-----------HVH21       <------ZmHOX2a(1)      ==========================HOX2a_HOX2a ------------WRI1  --------->TOE1(2) <-----------RAV1(1)            <------ZmHOX2a(1)  ------>ZmHOX2a(2)   aaaacgaagcaagtgatggtacctgtgaggccaaagagagtgttggaggagattgctctccagtttgtgaggatttgatcaccgagtgatccaggataca  20225700                --------->O2                --------->ANAC58                                                               ------                --------->TGA1a                                                               -------                --------->bZIP60(2)                                                        <---------YAB1                --------->ANAC46                                                      --------->YAB1                ======================================bZIP_DOF                       --------->ICU4                --------->ANAC58                                                     <---------YAB1 -             =============MYC_MYB                                                  <XXXXXXXXXXXXXXXXX       --------->ANAC58                                                            --------->YAB1   <    <------ZmHOX2a(1)                                                             --------->ICU4  ---  --------->ANAC58                                                                <---------YAB1 ----  --------->ANAC46                                                           <---------At4g35610 <---  --------->ANAC58                                                         <-----------RAV1(2)<------ ------>YAB1 ------->GAMYB                                               ----------->RAV1(1)--------- -TEIL --------->ANAC58                                                  <---------ALFIN1--------->YAB1 -ARR14(2) --------->ANAC58                                              --------->AtMYB61 --------->ICU4 >ARR14(2) --------->ANAC58                       <---------ARR11(3)  --------->AtMYB61 --------->ICU4 ==========HOX2a_HOX2a   --------->YAB1    <----------DOF2           --------->MYB46(3) <---------YAB1   tcataaggaacacaacccaagtcacaaaaatcacagacattacaactttcaatatccatttcaaagatgaaaccaccacagatgatgatgatgatgatga  20225800       --------->YAB1      --------->ICU4    --------->YAB1   <---------YAB1   --------->ICU4 --------->YAB1 --->YAB1 -->ICU4                                                                                      <------ -------->ICU4                                                                                <------ XXXMIR414--------->YAB1                  <---------ARR11(3)                                  ------- ---------YAB1                            --------->ARR11(3)                                  ------- ------>YAB1                            --------->ICU4                                   <---------YAB1 ----->ICU4                             <---------YAB1                              <---------ANAC46 ------YAB1        ------>ZmHOX2a(1)  --------->YAB1                              <---------ZAT14 ---YAB1 <---------YAB1          ----------->GT1                                  --------->ZAT14 >YAB1<---------YAB1      ---------->DOF2--------->YAB1                          <---------ZAT6   tgatgatgatgatgataagtccttggacaaaagaggggtttcatgatcatccatgttgttttttgaatttcttctactgcttagtgttgtgatgagagct  20225900                                                                        <------ZmHOX2a(1)                                                                     <------ZmHOX2a(1)                                                            <---------CCA1(1)                                                           --------->ARR14(3)                                    --------->STY1(2)      <---------ARR14(2)      --------->At4g35610   ----------->GT1                <---------ARR14(3)   --------->At4g35610      <---------ANAC58               --------->ARR11(3) <-----------RAV1(2)       <------NtERF2                   --------->ARR14(2) ---At4g35610           <------ZmHOX2a(1)                  <---------ARR11(3)        ----------->GT1 ---ZAT2              <---------TOE2(3)  <---------ZAT6  ----------->ARR10 ----------->GT1 -->ZAT2 --------->At4g35610<---------ANAC58 --------->AHL20(2)      <---------------------WRI1------ -->At4g35610    <----------DOF2    <---------STY1(2)   *TSS<---------RVE1(1)  ---------->DOF2 <-----   ggctcagaagcagcatcggcttttaaggaggcgttactagctagagataaattaagaagaagatattcttaggaggagagtaaaaggaagaaaatttctg  20226000                                                                                   <---------AHL20(2)                                                                                 <---------YAB1                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                  <---------AHL20(2)                                 <---------ARR11(3)        --------->ZAT14     --------->AHL20(2)        --------->GLK1(1)        <---------AHL20(1)        --------->ZAT18     <---------AHL20(2)      <---------ANAC58           --------->AHL20(1)        <---------ZAT18    <---------AHL20(2)      <---------ANAC58           --------->ARR11(3)        <---------ZAT14 <---------AHL20(2)   --------->ALFIN1         --------->YAB1     --------->TOE2(3)  <---------AHL20(1) --->HSFB2a(2)              --------->AHL20(2)<---------ICU4      --------->AHL20(2)          ------- ----HSFB2a(2)           --------->YAB1<----------DOF2 ------>ZmHOX2a(1)   --------->AHL20(2) =======   gaccagtggggtttctatcggtctcattaataaaaaatattcttttaaacattaatcctagtacacaatttttttaaaaaattatttttttttttaaaaa  20226100                         <---------ANAC58                         --------->ANAC55(2)                         <---------ANAC58                         <---------ANAC55(2)                        <-----------------------TaNAC69(2)               ------->MYC2               <-------MYC3               <-------MYC2               ------->MYC3              --------->O2              <---------O2  ------->TEIL              <---------TGA1a                                                                      <-              --------->TGA1a                                                                      --              --------->ANAC55(2)                                                                  <-              <---------ANAC55(2)                                             --------->DAG2       <-   ----------->GT1     --------->MYB52(1)     <---------O2                  <--------P            --- --->DOF2     --------->ANAC46                --------->O2              <---------ANAC46     -------- =======================bZIP_DOF          <-----------HVH21    --------->AtMYB61      --------->GLK1(2)   ggagagggtcattaacacgtgagagtaacgtacttgagagagactgtcacgttgtttgatttcgaccacaatttgagggtaaggtgagagtctgagagta  20226200    --------->ANAC58    --------->ANAC46                                 --------->ARR14(2)    --------->ANAC55(2)                              <---------ARR14(2)    <---------ANAC55(2)                              <---------GLK1(2)    ----------->GT1                             <-------GAMYB                                   -----    --------->ANAC58                           --------->MYB55(2)                             -------    --------->ANAC55(1)                        --------->MYB111(2)                           <------- --------------AtSPL8                          --------->MYB52(2)                            <------- ------------->AtSPL8                          <---------MYB46(3)                            <------- --------ICU4                                <-------GAMYB                       <---------ZAT14<---- --------------AtSPL3                       <---------MYB46(3)          <---------HSFB2a(2) *TSS<---- ------>ICU4         <------------CBF    ------------>AtMYB77           --------->HSFB2a(2) <-------- --->GT1       --------->CCA1(2)        ----------->HVH21               ------>ZmHOX2a(1)<-----------   attagtacgtaatatagataagagattgtttttatgacgactatgacggttgttggattctcgtcttgtcattcctagacgactatagagtaattgcgga  20226300                                                                                           --------->YAB1                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                             <---------ARR14(2)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                --------->GLK1(2)          <---------ICU4                                                                ------->TEIL<xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                <---------ARR11(1)        xxxxxxxxxxx                                                                <---------ARR14(2)   <---------At4g35610                                                                --------->ARR14(2)  xxxxxxxxxxxxxxxxx                                                               <---------ARR14(1)   --------->ANAC58                                                               <---------GLK1(2)  <xxxxxxxxxxxxxxxxxx                                                               <---------CCA1(2) xxxxxxxxxxxxxxxxxxxx                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   x                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      x    <<<<<<<<<NAM                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <xx ---->ARR14(2)                       <----------DOF2     <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxx -->LBD16                           <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxx --ANAC58                xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxx>smallRNA(i) --------->ANAC58x --ANAC46         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --ANAC58    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxx -----ARR14(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxx -----GLK1(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxx -LBD16  <-----------HVH21          <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ATHB12 -CBF   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(i)   ttctcatcccttgtcatttctaatacgtttgtgctatggctttttatcgaaagactggatagtccgaatctctcatgtgtatagggaagctaatcatctt  20226400                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           ------->GAMYB                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------TOE2(3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->MYB52(1)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <-----------GT1                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxx>smallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) x>smallRNA(fl3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxsmallRNA(se3)                  <---------YAB1    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxx>smallRNA(fl3)                 <---------TOE2(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <--- xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <-----------RAV1(1)                                <--- xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------MYB46(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)------>ZmHOX2a(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxx xxxxxx>smallRNA(se3)      --------->ZAT14  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------At4g35610 xxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------MYB52(1)<xxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxx>smallRNA(s) --------->MYB52(2)       <--- xxxxx>smallRNA(si3)      <----------DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <xxxxxxxxxxxxxxx xxxxx>smallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---- x>smallRNA(i2)     <----------DOF2<---------TOE1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <--------   gccgatggattaacgaactatgctttctctttactcctatgtttgcatttgttggagtctaggcccgatgttgttagttctattttgttagatgatgtag  20226500  Previous    Next  AGI:  At5g49740.1    Description:  ATFRO7/FRO7 (FERRIC REDUCTION OXIDASE 7); ferric-chelate reductase/ oxidoreductase. similar to ATFRO6/FRO6 (FERRIC REDUCTION OXIDASE 6), ferric-chelate reductase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G49730.1); similar to Ferric reductase-like transmembrane component [Medicago truncatula] (GB:ABD32912.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83907.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22251.1); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains Inter Range:  from: 20222568    to: 20225956    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g49743.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 20226292    to: 20226532    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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